Immunodietica: A data-driven approach to investigate interactions between diet and autoimmune disorders

Bach, 2002, The effect of infections on susceptibility to autoimmune and allergic diseases, N. Engl. J. Med., 347, 911, 10.1056/NEJMra020100 Bischoff, 2014, Intestinal permeability--a new target for disease prevention and therapy, BMC Gastroenterol., 14, 189, 10.1186/s12876-014-0189-7 Chen, 1994, Regulatory T cell clones induced by oral tolerance: suppression of autoimmune encephalomyelitis, Science, 265, 1237, 10.1126/science.7520605 Delong, 2016, Pathogenic CD4 T cells in type 1 diabetes recognize epitopes formed by peptide fusion, Science, 351, 711, 10.1126/science.aad2791 Esterhazy, 2016, Classical dendritic cells are required for dietary antigen-mediated induction of peripheral T(reg) cells and tolerance, Nat. Immunol., 17, 545, 10.1038/ni.3408 Guilherme, 1995, Human heart-infiltrating T-cell clones from rheumatic heart disease patients recognize both streptococcal and cardiac proteins, Circulation, 92, 415, 10.1161/01.CIR.92.3.415 Holzbauer, 2010, Epidemiologic investigation of immune-mediated polyradiculoneuropathy among abattoir workers exposed to porcine brain, PLoS One, 5, e9782, 10.1371/journal.pone.0009782 Hvatum, 2006, The gut-joint axis: cross reactive food antibodies in rheumatoid arthritis, Gut, 55, 1240, 10.1136/gut.2005.076901 Kjeldsen-Kragh, 1991, Controlled trial of fasting and one-year vegetarian diet in rheumatoid arthritis, Lancet, 338, 899, 10.1016/0140-6736(91)91770-U Kostraba, 1993, Early exposure to cow's milk and solid foods in infancy, genetic predisposition, and risk of IDDM, Diabetes, 42, 288, 10.2337/diab.42.2.288 Lachance, 2010, An outbreak of neurological autoimmunity with polyradiculoneuropathy in workers exposed to aerosolised porcine neural tissue: a descriptive study, Lancet Neurol., 9, 55, 10.1016/S1474-4422(09)70296-0 Leyva-Castillo, 2019, Mechanical skin injury promotes food anaphylaxis by driving intestinal mast cell expansion, Immunity, 50, 1, 10.1016/j.immuni.2019.03.023 Lonnrot, 2000, Enterovirus infection as a risk factor for beta-cell autoimmunity in a prospectively observed birth cohort: the Finnish Diabetes Prediction and Prevention Study, Diabetes, 49, 1314, 10.2337/diabetes.49.8.1314 Malosse, 1993, Correlation analysis between bovine populations, other farm animals, house pets, and multiple sclerosis prevalence, Neuroepidemiology, 12, 15, 10.1159/000110295 Mathsson, 2008, Antibodies against citrullinated vimentin in rheumatoid arthritis: higher sensitivity and extended prognostic value concerning future radiographic progression as compared with antibodies against cyclic citrullinated peptides, Arthritis Rheum., 58, 36, 10.1002/art.23188 Menser, 1978, Rubella infection and diabetes mellitus, Lancet, 1, 57, 10.1016/S0140-6736(78)90001-6 Molberg, 1998, Tissue transglutaminase selectively modifies gliadin peptides that are recognized by gut-derived T cells in celiac disease, Nat. Med., 4, 713, 10.1038/nm0698-713 Mu, 2017, Leaky gut as a danger signal for autoimmune diseases, Front. Immunol., 8, 598, 10.3389/fimmu.2017.00598 Muley, 2018, Immunohistochemistry and electrophysiological findings in swine abattoir workers with immune-mediated polyradiculoneuropathy, J. Neurol. Sci., 385, 34, 10.1016/j.jns.2017.12.005 Norris, 2003, Timing of initial cereal exposure in infancy and risk of islet autoimmunity, J. Am. Med. Assoc., 290, 1713, 10.1001/jama.290.13.1713 Pabst, 2012, Oral tolerance to food protein, Mucosal Immunol., 5, 232, 10.1038/mi.2012.4 Rojas, 2018, Molecular mimicry and autoimmunity, J. Autoimmun., 95, 100, 10.1016/j.jaut.2018.10.012 Schopfer, 1982, Diabetes mellitus, endocrine autoantibodies, and prenatal rubella infection, Lancet, 2, 159, 10.1016/S0140-6736(82)91126-6 Shahrizaila, 2011, Guillain-barre syndrome animal model: the first proof of molecular mimicry in human autoimmune disorder, J. Biomed. Biotechnol., 2011, 829129 Song, 2010, Autoantibodies in rheumatoid arthritis: rheumatoid factors and anticitrullinated protein antibodies, QJM, 103, 139, 10.1093/qjmed/hcp165 Speedy, 2003, Global production and consumption of animal source foods, J. Nutr., 133, 4048S, 10.1093/jn/133.11.4048S Tracy, 2011, Auto-immune polyradiculoneuropathy and a novel IgG biomarker in workers exposed to aerosolized porcine brain, J. Peripher. Nerv. Syst., 16, 34, 10.1111/j.1529-8027.2011.00303.x Veys, 1968, Serum levels of IgG, IgM, and IgA in rheumatoid arthritis, Ann. Rheum. Dis., 27, 431, 10.1136/ard.27.5.431 Veys, 1976, Rheumatoid factor and serum IgG, IgM and IgA levels in rheumatoid arthritis with vasculitis, Scand. J. Rheumatol., 5, 1 Virtanen, 2003, Nutritional risk predictors of beta cell autoimmunity and type 1 diabetes at a young age, Am. J. Clin. Nutr., 78, 1053, 10.1093/ajcn/78.6.1053 Vojdani, 2014, Environmental triggers and autoimmunity, Autoimmune Dis., 2014, 798029 Yu, 2015, Clonal deletion prunes but does not eliminate self-specific alphabeta CD8(+) T lymphocytes, Immunity, 42, 929, 10.1016/j.immuni.2015.05.001