Identification of pathogenesis-related microRNAs in hepatocellular carcinoma by expression profiling

Oncology Letters - Tập 4 Số 4 - Trang 817-823 - 2012
Yuki Katayama1, MOEGI MAEDA1, Ken Miyaguchi1, Shota Nemoto1, Mahmut Yasen1, Shinji Tanaka2, Hiroshi Mizushima3, Yutaka Fukuoka4, Shigeki Arii2, Hiroshi Tanaka1
1Department of Bioinformatics, Graduate School, Tokyo Medical and Dental University, Tokyo, Japan.
2Department of Hepato-Biliary-Pancreatic Surgery Graduate School Tokyo Medical and Dental University Tokyo Japan
3Center for Public Health Informatics, National Institute of Public Health, Tokyo, Japan
4Department of Biosystem Modeling, Graduate School of Biomedical Science, Tokyo Medical and Dental University, Tokyo, Japan

Tóm tắt

Từ khóa


Tài liệu tham khảo

El-Serag, 2007, Hepatocellular carcinoma: epidemiology and molecular carcinogenesis, Gastroenterology, 132, 2557, 10.1053/j.gastro.2007.04.061

Blum, 2005, Hepatocellular carcinoma: therapy and prevention, World J Gastroenterol, 11, 7391

Cramp, 1999, HBV + HCV = HCC?, Gut, 45, 168, 10.1136/gut.45.2.168

Soini, 1996, An aflatoxin-associated mutational hotspot at codon 249 in the p53 tumor suppressor gene occurs in hepatocellular carcinomas from Mexico, Carcinogenesis, 17, 1007, 10.1093/carcin/17.5.1007

Boffetta, 2003, Meta-analysis of studies of occupational exposure to vinyl chloride in relation to cancer mortality, Scand J Work Environ Health, 29, 220, 10.5271/sjweh.725

Tsukuma, 1995, A case-control study of hepatocellular carcinoma in Osaka, Japan, Int J Cancer, 45, 231, 10.1002/ijc.2910450205

Donato, 2002, Alcohol and hepatocellular carcinoma: the effect of lifetime intake and hepatitis virus infections in men and women, Am J Epidemiol, 155, 323, 10.1093/aje/155.4.323

Volinia, 2006, A microRNA expression signature of human solid tumors defines cancer gene targets, Proc Natl Acad Sci USA, 103, 2257, 10.1073/pnas.0510565103

Yanaihara, 2006, Unique micro RNA molecular profiles in lung cancer diagnosis and prognosis, Cancer Cell, 9, 189, 10.1016/j.ccr.2006.01.025

Lee, 2007, Expression profiling identifies microRNA signature in pancreatic cancer, Int J Cancer, 120, 1046, 10.1002/ijc.22394

Murakami, 2006, Comprehensive analysis of microRNA expression patterns in hepatocellular carcinoma and non-tumorous tissues, Oncogene, 25, 2537, 10.1038/sj.onc.1209283

Budhu, 2008, Identification of metastasis-related microRNAs in hepatocellular carcinoma, Hepatology, 47, 897, 10.1002/hep.22160

Varnhort, 2008, MicroRNA gene expression profile of hepatitis C virus-associated hepatocellular carcinoma, Hepatology, 47, 1223, 10.1002/hep.22158

Laderio, 2008, MicroRNA profiling in hepatocellular tumor is associated with clinical features and oncogene/tumor suppressors gene mutations, Hepatology, 47, 1955, 10.1002/hep.22256

Li, 2008, Diagnostic and prognositic implications of microRNAs in human hepatocellular carcinoma, Int J Cancer, 123, 1616, 10.1002/ijc.23693

Ura, 2009, Differential microRNA expression between hapatitis B and hepatitis C leading disease progression to hepatocellular carcinoma, Hepatology, 49, 1098, 10.1002/hep.22749

Toffanin, 2011, MicroRNA-based classification of hepatocellular carcinoma and oncogenic role of miR-517a, Gastoenterology, 140, 1618, 10.1053/j.gastro.2011.02.009

Yasen, 2009, Expression of Aurora B and alterative variant forms in hepatocellular carcinoma and adjacent tissue, Cancer Sci, 100, 472, 10.1111/j.1349-7006.2008.01068.x

Gramantieri, 2008, MicroRNA involvement in hepatocellular carcinoma, J Cell Mol Med, 12, 2189, 10.1111/j.1582-4934.2008.00533.x

Aravalli, 2008, Molecular mechanisms of hepatocellular carcinoma, Hepatology, 48, 2047, 10.1002/hep.22580

Ji, 2009, New kids on the block, Cancer Biol Therapy, 8, 1683, 10.4161/cbt.8.18.8898

Liang, 2010, MicroRNA-125b suppressed human liver cancer cell proliferation and metastasis by directly targeting oncogene LIN28B, Hepatology, 52, 1731, 10.1002/hep.23904

Osaki, 2008, MicroRNAs as biomarkers and therapeutic drugs in human cancer, Biomarkers, 13, 658, 10.1080/13547500802646572

Takamizawa, 2004, Reduced expression of the let-7 micro RNAs in human lung cancers in association with shortened postoperative survival, Cancer Res, 64, 3753, 10.1158/0008-5472.CAN-04-0637

Fabbri, 2007, MicroRNA-29 family reverts aberrant methylation in lung cancer by targeting DNA methyltransferases 3A and 3B, Proc Natl Acad Sci USA, 104, 15805, 10.1073/pnas.0707628104

Bommer, 2007, p53-mediated activation of miRNA34 candidate tumor-suppressor genes, Curr Biol, 17, 1298, 10.1016/j.cub.2007.06.068

Crawford, 2008, MicroRNA-126 inhibits invasion in non-small cell lung carcinoma cell lines, Biochem Biophys Res Commun, 373, 607, 10.1016/j.bbrc.2008.06.090

Hayashita, 2005, A polycistronic microRNA cluster, miR-17-92, is overexpressed in human lung cancers and enhances cell proliferation, Cancer Res, 65, 9628, 10.1158/0008-5472.CAN-05-2352

Volinia, 2006, A microRNA expression signature of human solid tumors defines cancer gene targets, Proc Natl Acad Sci USA, 103, 2257, 10.1073/pnas.0510565103

Garofalo, 2008, MicroRNA signatures of TRAIL resistance in human non-small cell lung cancer, Oncogene, 27, 3845, 10.1038/onc.2008.6

Yanaihara, 2006, Unique microRNA molecular profiles in lung cancer diagnosis and prognosis, Cancer Cell, 9, 189, 10.1016/j.ccr.2006.01.025

Hu, 2008, Genetic variants of miRNA sequences and non-small cell lung cancer survival, J Clin Invest, 118, 2600

Yu, 2008, MicroRNA signature predicts survival and relapse in lung cancer, Cancer Cell, 13, 48, 10.1016/j.ccr.2007.12.008

Markou, 2008, Prognostic value of mature microRNA-21 and microRNA-205 overexpression in non-small cell lung cancer by quantitative real-time RT-PCR, Clin Chem, 54, 1696, 10.1373/clinchem.2007.101741

Yan, 2008, MicroRNA miR-21 overexpression in human breast cancer is associated with advanced clinical stage, lymph node metastasis and patient poor prognosis, RNA, 14, 2348, 10.1261/rna.1034808

Chan, 2008, miR-21 microRNA expression in human gastric carcinomas and its clinical association, Anticancer Res, 28, 907

Schepeler, 2008, Diagnostic and prognostic microRNAs in stage II colon cancer, Cancer Res, 68, 6416, 10.1158/0008-5472.CAN-07-6110

Childs, 2009, Low-level expression of microRNAs let-7d and miR-205 are prognostic markers of head and neck squamous cell carcinoma, Am J Pathol, 174, 736, 10.2353/ajpath.2009.080731

Roldo, 2006, MicroRNA expression abnormalities in pancreatic endocrine and acinar tumors are associated with distinctive pathologic features and clinical behavior, J Clin Oncol, 24, 4677, 10.1200/JCO.2005.05.5194

Marcucci, 2008, MicroRNA expression in cytogenetically normal acute myeloid leukemia, N Engl J Med, 358, 1919, 10.1056/NEJMoa074256

Calin, 2005, A microRNA signature associated with prognosis and progression in chronic lymphocytic leukemia, N Engl J Med, 353, 1793, 10.1056/NEJMoa050995

Lu, 2007, Hypermethylation of let-7a-3 in epithelial ovarian cancer is associated with low insulin-like growth factor-II expression and favorable prognosis, Cancer Res, 67, 10117, 10.1158/0008-5472.CAN-07-2544

Guo, 2008, Distinctive microRNA profiles relating to patient survival in esophageal squamous cell carcinoma, Cancer Res, 68, 26, 10.1158/0008-5472.CAN-06-4418

Chim, 2008, Detection and characterization of placental microRNAs in material plasma, Clin Chem, 54, 482, 10.1373/clinchem.2007.097972

Gilad, 2008, Serum microRNAs are promising biomarkers, PLoS One, 3, e3148, 10.1371/journal.pone.0003148

Mitchel, 2008, Circulating microRNAs as stable blood-based markers for cancer detection, Proc Natl Acad Sci USA, 105, 10513, 10.1073/pnas.0804549105

Lawrie, 2008, Aberrant expression of microRNA biosynthetic pathways components is a common feature of haematological malignancy, Br J Hematol, 141, 672, 10.1111/j.1365-2141.2008.07077.x

Diaz, 2008, Deregulated expression of miR-106a predicts survival in human colon cancer patients, Genes Chromosomes Cancer, 47, 794, 10.1002/gcc.20580

Schee, 2010, MicroRNAs as biomarkers in colorectal cancer, Am J Patho, 177, 1592, 10.2353/ajpath.2010.100024

Wu, 2010, MicroRNA dysregulation in gastric cancer: a new player enters the game, Oncogene, 29, 5761, 10.1038/onc.2010.352

Zavadil, 2010, Profiling and functional analyses of microRNAs and their target gene products in human uterine leiomyomas, PLoS One, 5, e12362, 10.1371/journal.pone.0012362

Iorio, 2010, Interplay between microRNAs and the epigenetic machinery: an intricate network, Boichim Biophys Acta, 1799, 694, 10.1016/j.bbagrm.2010.05.005

Valeri, 2009, Epigenetics, miRNAs, and human cancer: a new chapter in human gene regulation, Mamm Genome, 20, 573, 10.1007/s00335-009-9206-5

Schaefer, 2010, MicroRNAs and cancer: current state and future perspectives in urologic oncology, Urologic Oncol, 28, 4, 10.1016/j.urolonc.2008.10.021

Garzon, 2010, Targeting microRNAs in cancer: rationale, strategies and challenges, Nat Rev Drug Discov, 9, 775, 10.1038/nrd3179

Calin, 2004, MicroRNA profiling reveals distinct signatures in B cell chronic lymphocytic leukemias, Proc Natl Acad Sci USA, 101, 11755, 10.1073/pnas.0404432101

Betel, 2010, Comprehensive modeling of microRNA targets predicts functional non-conserved and non-canonical sites, Genome Biol, 11, R90, 10.1186/gb-2010-11-8-r90

Kang, 2008, Gain at chromosomal region 5p15.33, containing TERT, is the most frequent genetic event in early stages of non-small cell lung cancer, Cancer Genet Cytogenet, 82, 1

Yamamoto, 2007, Gain of 5p15.33 is associated with progression of bladder cancer, Oncology, 72, 132, 10.1159/000111132

Yu, 2008, A precisely regulated gene expression cassette potentially modulates metastasis and survival in multiple solid cancers, PLoS Genet, 4, e1000129, 10.1371/journal.pgen.1000129

Bodmer, 2002, Disruption of a novel MFS transporter gene, DIRC2, by a familial renal cell carcinoma-associated t(2;3)(q35;q21), Hum Mol Genet, 11, 641, 10.1093/hmg/11.6.641

Watanabe, 2010, Expression of phosphoprotein enriched in astrocytes 15 kDa (PEA-15) in astrocytic tumors: a novel approach of correlating malignancy grade and prognosis, J Neurooncol, 100, 449, 10.1007/s11060-010-0201-1