Identification by fluorescence spectroscopy of lactic acid bacteria isolated from a small-scale facility producing traditional dry sausages

Amiel, 2000, Potentiality of Fourier transform infrared spectroscopy for discrimination and identification of dairy lactic acid bacteria, Lait, 80, 445, 10.1051/lait:2000137 Ammor, 2004, Phenotypic and genotypic identification of lactic acid bacteria isolated from a small-scale facility producing traditional dry sausages, Food Microbiol. Berthier, 1998, Rapid species identification within two groups of closely related lactobacilli using PCR primers that target the 16S/23S rRNA spacer region, FEMS Microbiol. Lett., 161, 97, 10.1111/j.1574-6968.1998.tb12934.x Bertrand, 1992, Application of multivariate analyses to NIR spectra of gelatinized starch, Appl. Spectrosc., 46, 1420, 10.1366/0003702924123665 Cantor, 1980, Other optical techniques, 409 Chevallier, 2001, Application de la démarche d'écologie microbienne dirigée dans un atelier fermier charcutier (I): inventaire de la flore de l'atelier et du produit, 213 Choo-Smith, 2001, Investigating microbial (micro)colony heterogeneity by vibrational spectroscopy, Appl. Environ. Microbiol., 67, 1461, 10.1128/AEM.67.4.1461-1469.2001 Collins, 1987, Classification of Lactobacillus divergens, Lactobacillus piscicola, and some catalase-negative, asporogenous, rod-shaped bacteria from poultry in a new genus, Carnobacterium, Int. J. Syst. Bacteriol., 37, 310, 10.1099/00207713-37-4-310 Estes, 2003, Reagentless detection of microorganisms by intrinsic fluorescence, Biosens. Bioelectron., 18, 511, 10.1016/S0956-5663(03)00008-3 Goh, 2000, Identification of Enterococcus species and phenotypically similar Lactococcus and Vagococcus species by reverse checkerboard hybridization to chaperonin 60 gene sequences, J. Clin. Microbiol., 38, 3953, 10.1128/JCM.38.11.3953-3959.2000 Hammes, 1994, Starters in the processing of meat products, Meat Sci., 36, 155, 10.1016/0309-1740(94)90039-6 Hariston, 1997, Design of instrument for real-time detection of bioaerosols using simultaneous measurement of particle aerodynamic size and intrinsic fluorescence, J. Aerosol Sci., 28, 471, 10.1016/S0021-8502(96)00448-X Herbert, S., 1999. Caractérisation de la structure moléculaire et microscopique de fromages à pâte molle. Analyse multivariée des données structurales en relation avec la texture, Thèse, Ecole Doctorale Chimie Biologie de l’Université de Nantes, France, 118 p. Jollife, 1986 Kagermeier-Callaway, 1995, Lactobacillus sake Katagiri, Kitahara, and Fukami 1934 is the senior synonym for Lactobacillus bavaricus Stetter and Stetter 1980, Int. J. Syst. Bacteriol., 45, 398, 10.1099/00207713-45-2-398 Kandler, 1983, Lactobacillus halotolerans sp. nov., nom. rev. and Lactobacillus minor sp. nov., nom. rev., Syst. Appl. Microbiol., 4, 280, 10.1016/S0723-2020(83)80056-3 Kell, 1991, Quantifying heterogeneity: flow cytometry of bacteria cultures, Antonie van Leeuwenhoek, 60, 145, 10.1007/BF00430362 Lakowicz, 1983 Leblanc, 2002, Monitoring the identity of bacteria using their intrinsic fluorescence, FEMS Microbiol. Lett., 211, 147, 10.1111/j.1574-6968.2002.tb11217.x Leblanc, 2004, Monitoring bacteria growth using their intrinsic fluorescence, Sci. Aliment., 24, 207, 10.3166/sda.24.207-220 Leriche, 2004, Alteration of raw-milk cheese by Pseudomonas spp.—monitoring the sources of contamination using fluorescence spectroscopy and metabolic profiling, J. Microb. Methods, 10.1016/j.mimet.2004.05.009 Montel, 1991, A simplified Key for identifying homofermentative Lactobacillus and Carnobacterium spp. from meat, J. Appl. Bacteriol., 70, 469, 10.1111/j.1365-2672.1991.tb02742.x Niven, 1957, Lactobacillus viridescens nov. spec., a heterofermentative species that produces a green discoloration of cured meat pigments, J. Bacteriol., 73, 758, 10.1128/JB.73.6.758-759.1957 Parente, 2001, Phenotypic diversity of lactic acid bacteria isolated from fermented sausages produced in Basilicata (southern Italy), J. Appl. Microbiol., 90, 943, 10.1046/j.1365-2672.2001.01328.x Rachman, 2003, Identification of Lactobacillus alimentarius and Lactobacillus farciminis with 16S–23S rDNA intergenic spacer region polymorphism and PCR amplification using species-specific oligonucleotide, J. Appl. Microbiol., 95, 1207, 10.1046/j.1365-2672.2003.02117.x Safar, 1994, Characterization of edible oils, butters, and margarines by Fourier transform infrared spectroscopy with attenuated total reflectance, JAOCS, 71, 371, 10.1007/BF02540516 Stryer, 1988 Tailliez, 2002, Le point sur les outils moléculaires de classification et d'écologie microbienne, Sci. Aliment., 22, 5, 10.3166/sda.22.5-21 Trüper, 1997, Taxonomic note: necessary correction of specific epithets formed as substantives (nouns) “in apposition”, Int. J. Syst. Bacteriol., 47, 908, 10.1099/00207713-47-3-908