Identification and characterization of an interleukin-15 homologue from Tetraodon nigroviridis
Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology - Tập 143 - Trang 335-343 - 2006
Tài liệu tham khảo
Altschul, 1990, Basic local alignment search tool, J. Mol. Biol., 215, 403, 10.1016/S0022-2836(05)80360-2
Armitage, 1995, IL-15 has stimulatory activity for the induction of B cell proliferation and differentiation, J. Immunol., 154, 483, 10.4049/jimmunol.154.2.483
Bamford, 1994, The interleukin, (IL) 2 receptor beta chain is shared by IL-2 and a cytokine, provisionally designated IL-T, that stimulates T-cell proliferation and the induction of lymphokine-activated killer cells, Proc. Natl. Acad. Sci. U. S. A., 91, 4940, 10.1073/pnas.91.11.4940
Bazan, 1990, Haemopoietic receptors and helical cytokines, Immunol. Today, 11, 350, 10.1016/0167-5699(90)90139-Z
Bei, 2006, Two interleukin (IL)-15 homologues in fish from two distinct origins, Mol. Immunol., 43, 860, 10.1016/j.molimm.2005.06.040
Bendtsen, 2004, Improved prediction of signal peptides: signalP 3.0, J. Mol. Biol., 340, 783, 10.1016/j.jmb.2004.05.028
Bird, 2005, Characterisation and expression analysis of interleukin 2 (IL-2) and IL-21 homologues in the Japanese pufferfish, Fugu rubripes, following their discovery by synteny, Immunogenetics, 56, 909, 10.1007/s00251-004-0741-7
Boulay, 2003, Molecular phylogeny within type I cytokines and their cognate receptors, Immunity, 19, 159, 10.1016/S1074-7613(03)00211-5
Breathnach, 1981, Organization and expression of eucaryotic split genes coding for proteins, Annu. Rev. Biochem., 50, 349, 10.1146/annurev.bi.50.070181.002025
Burge, 1997, Prediction of complete gene structures in human genomic DNA, J. Mol. Biol., 268, 78, 10.1006/jmbi.1997.0951
Caput, 1986, Identification of a common nucleotide sequence in the 3′-untranslated region of mRNA molecules specifying inflammatory mediators, Proc. Natl. Acad. Sci. U. S. A., 83, 1670, 10.1073/pnas.83.6.1670
Carson, 1997, A potential role for interleukin-15 in the regulation of human natural killer cell survival, J. Clin. Invest., 99, 937, 10.1172/JCI119258
Crollius, 2002, Genome-wide comparisons between human and Tetraodon, Ernst. Schering Res. Found., 11
Falquet, 2002, The PROSITE database, its status in 2002, Nucleic Acids Res., 30, 235, 10.1093/nar/30.1.235
Gamero, 1995, Interleukin 15 induction of lymphokine-activated killer cell function against autologous tumor cells in melanoma patient lymphocytes by a CD18-dependent, perforin-related mechanism, Cancer Res., 55, 4988
Gilligan, 2002, Fugu and human sequence comparison identifies novel human genes and conserved non-coding sequences, Gene, 294, 35, 10.1016/S0378-1119(02)00793-X
Giri, 1994, Utilization of the beta and gamma chains of the IL-2 receptor by the novel cytokine IL-15, EMBO J., 13, 2822, 10.1002/j.1460-2075.1994.tb06576.x
Grabstein, 1994, Cloning of a T cell growth factor that interacts with the beta chain of the interleukin-2 receptor, Science, 264, 965, 10.1126/science.8178155
Hedges, 2002, The origin and evolution of model organisms, Nat. Rev. Genet., 3, 838, 10.1038/nrg929
Jaillon, 2004, Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype, Nature, 431, 946, 10.1038/nature03025
Kent, 2002, BLAT—the BLAST-like alignment tool, Genome Res., 12, 656, 10.1101/gr.229202. Article published online before March 2002
Ku, 2000, Control of homeostasis of CD8+ memory T cells by opposing cytokines, Science, 288, 675, 10.1126/science.288.5466.675
Kumar, 2004, MEGA3: integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment, Brief Bioinform, 5, 150, 10.1093/bib/5.2.150
Laird, 2000, 50 million years of chordate evolution: seeking the origins of adaptive immunity, Proc. Natl. Acad. Sci. U. S. A., 97, 6924, 10.1073/pnas.97.13.6924
Lodolce, 2002, Interleukin-15 and the regulation of lymphoid homeostasis, Mol. Immunol., 39, 537, 10.1016/S0161-5890(02)00211-0
Lutfalla, 2003, Comparative genomic analysis reveals independent expansion of a lineage-specific gene family in vertebrates: the class II cytokine receptors and their ligands in mammals and fish, BMC Genomics, 4, 29, 10.1186/1471-2164-4-29
Meazza, 1996, Identification of a novel interleukin-15, (IL-15) transcript isoform generated by alternative splicing in human small cell lung cancer cell lines, Oncogene, 12, 2187
Nielsen, 1997, Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites, Protein Eng., 10, 1, 10.1093/protein/10.1.1
Onu, 1997, Regulation of IL-15 secretion via the leader peptide of two IL-15 isoforms, J. Immunol., 158, 255, 10.4049/jimmunol.158.1.255
Pettit, 1997, Structure–function studies of interleukin 15 using site-specific mutagenesis, polyethylene glycol conjugation, and homology modeling, J. Biol. Chem., 272, 2312, 10.1074/jbc.272.4.2312
Rost, 1996, PHD: predicting one-dimensional protein structure by profile-based neural networks, Methods Enzymol., 266, 525, 10.1016/S0076-6879(96)66033-9
Sachs, 1993, Messenger RNA degradation in eukaryotes, Cell, 74, 413, 10.1016/0092-8674(93)80043-E
Saitou, 1987, The neighbor-joining method: a new method for reconstructing phylogenetic trees, Mol. Biol. Evol., 4, 406
Thompson, 1994, CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Res., 22, 4673, 10.1093/nar/22.22.4673
Wilkinson, 1995, Chemoattraction of human blood T lymphocytes by interleukin-15, J. Exp. Med., 181, 1255, 10.1084/jem.181.3.1255