IS1294, a DNA Element That Transposes by RC Transposition
Tài liệu tham khảo
Albiger, 2000, pUB2380: Characterization of a ColD-like resistance plasmid, Plasmid, 10.1006/plas.1999.1459
Alonso, 1988, Functional analysis of the leading strand replication origin of plasmid pUB110 in Bacillus subtilis, Nucleic Acids Res., 16, 9127, 10.1093/nar/16.19.9127
Arthur, 1979, Dissection of the transposition process: A transposon-encoded site-specific recombination system, Mol. Gen. Genet., 175, 267, 10.1007/BF00397226
Ausubel, 1992
Avila, 1988, Physical and genetic map of the IncW plasmid R388, Plasmid, 20, 155, 10.1016/0147-619X(88)90019-4
Avila, 1984, Plasmids containing one inverted repeat of Tn21 can fuse with other plasmids in the presence of Tn21 transposase, Mol. Gen. Genet., 195, 288, 10.1007/BF00332761
Baas, 1987, Mutational analysis of the bacteriophage φX174 replication origin, J. Mol. Microbiol., 198, 51
Bashkirov, 1986, Nucleotide sequence and functional map of kanamycin-resistant plasmid pUB110 from Staphylococcus aureus, Genetika, 22, 1081
Bennett, 1992, Transposable elements, Encyclop. Microbiol., 4, 311
Bennett, 1976, Translocation of a discrete piece of deoxuribonucleic acid carrying an amp gene between replicons in Escherichia coli, J. Bacteriol., 126, 1, 10.1128/JB.126.1.1-6.1976
Bennett, P. M., Heritage, J., Perry, A., Harvey, J., and Zagaglia, C.1986. Transposition and plasmid evolution: Variations on a theme. InAntibiotic Resistance Genes: Ecology, Transfer and Expression (S. B. Levy and R. P. Novick, Eds.), pp. 355–368, Banbury Report 24, Cold Spring Harbor Laboratory.
Berg, 1989, Transposon Tn5, 185
Berg, 1989
Boe, 1989, Replication origins of single-stranded-DNA plasmid pUB110, J. Bacteriol., 171, 3366, 10.1128/jb.171.6.3366-3372.1989
Bolivar, 1977, Construction and characterisation of new cloning vehicles. II. A multipurpose cloning system, Gene, 2, 95, 10.1016/0378-1119(77)90000-2
Clewell, 1988, Transposition in Streptococcus: Structural and genetic properties of the conjugative transposon Tn916, Soc. Gen. Microbiol. Symp., 43, 43
Comanducci, 1989, pUB2380: An R plasmid encoding a unique, natural one-ended transposition system, 305
Courvalin, 1987, Tn1545: A conjugative shuttle transposon, Mol. Gen. Genet., 206, 259, 10.1007/BF00333582
Craig, 1995, Unity in transposition reactions, Science, 270, 253, 10.1126/science.270.5234.253
Craig, 1996, Transposon Tn7, Curr. Topics Microbiol. Immunol., 204, 27
Craig, 1997, Target site selection in transposition, Ann. Rev. Biochem., 66, 437, 10.1146/annurev.biochem.66.1.437
Datta, 1972, Trimethroprim resistance conferred by W plasmids in enterobacteriacae, J. Gen. Microbiol., 72, 349, 10.1099/00221287-72-2-349
de la Cruz, 1982, Genetic and molecular characterization of Tn21, a multiple resistance transposon from R100.1, J. Bacteriol., 151, 222, 10.1128/JB.151.1.222-228.1982
Del Solar, 1998, Replication and control of circular bacterial plasmids, Microbiol. Mol. Biol. Rev., 62, 10.1128/MMBR.62.2.434-464.1998
Diaz-Aroca, 1984, Characterization of the new insertion-sequence IS91 from an Alpha-hemolysin plasmid of Escherichia coli, Mol. Gen. Genet., 193, 493, 10.1007/BF00382089
Diaz-Aroca, 1987, Transposition of IS91 does not generate a target duplication, J. Bacteriol., 169, 442, 10.1128/jb.169.1.442-443.1987
Espinosa, 1995, Plasmid rolling circle replication and its control, FEMS Microbiol. Lett., 130, 111, 10.1111/j.1574-6968.1995.tb07707.x
Fayet, 1990, Functional similarities between retroviruses and the IS3 family of bacterial insertion sequences, Mol. Microbiol., 4, 1771, 10.1111/j.1365-2958.1990.tb00555.x
Fluit, 1986, Termination and reinitiation signals of bacteriophage ΦX174 rolling-circle DNA replication, Virology, 154, 357, 10.1016/0042-6822(86)90461-7
Galas, 1989, Bacteria insertion sequences, 109
Gonzalez, 1998, A race-specific insertion of transposable element IS801 in Pseudomonas syringae pv. phaseolicola, Mol. Plant–Microbe Interact., 11, 423, 10.1094/MPMI.1998.11.5.423
Goryshin, 1998, Tn5 in vitro transposition, J. Biol. Chem., 273, 7367, 10.1074/jbc.273.13.7367
Hallet, 1997, Transposition and site-specific recombination: Adapting DNA cut-and-paste mechanisms to a variety of genetic rearrangements, FEMS Microbiol. Rev., 21, 157, 10.1111/j.1574-6976.1997.tb00349.x
Hanahan, 1983, Studies on the transformation of Escherichia coli with plasmids, J. Mol. Biol., 166, 557, 10.1016/S0022-2836(83)80284-8
Heidekamp, 1981, Construction and characterization of recombinant plasmid DNAs containing sequences of the origin of bacteriophage ΦX174 DNA replication, Nucleic Acids Res., 9, 3335, 10.1093/nar/9.14.3335
Heritage, 1985, Plasmid fusions mediated by one end of TnA, J. Gen. Microbiol., 131, 1131
Iida, 1981, Genesis and natural history of IS-mediated transposons, Cold Spring Harbor Symp. Quant. Biol., 45, 27, 10.1101/SQB.1981.045.01.006
Ilyina, 1992, Conserved sequence motifs in the initiator proteins for rolling circle DNA replication encoded by diverse replicons from eubacteria, eucaryotes and archaebacteria, Nucleic Acids Res., 20, 3279, 10.1093/nar/20.13.3279
Jenkins, 1978, Effect of mutations in deoxyribonucleic acid repair pathways on the sensitivity of Escherichia coli K-12 strains to nitrofurantoin, J. Bacteriol., 125, 1214, 10.1128/JB.125.3.1214-1216.1976
Jin, 1997, Why is the initiation nick site of an AT-rich rolling circle plasmid at the tip of a GC-rich cruciform, EMBO J., 16, 4456, 10.1093/emboj/16.14.4456
Jones, 1997, The ΦX174-type primosome promotes replisome assembly at the site of recombination in bacteriophage Mu transposition, EMBO J., 16, 6886, 10.1093/emboj/16.22.6886
Josson, 1989, Characterization of a gram-positive broad-host-range plasmid isolated from Lactobacillus hilgardii, Plasmid, 21, 9, 10.1016/0147-619X(89)90082-6
Josson, 1990, Lactobacillus hilgardii plasmid pLAB100 consists of 2 functional cassettes commonly found in other gram-positive organisms, J. Bacteriol., 172, 3089, 10.1128/jb.172.6.3089-3099.1990
Khan, 1997, Rolling-circle replication of bacterial plasmids, Microbiol. Mol. Biol. Rev., 61, 10.1128/.61.4.442-455.1997
Kleckner, 1989, Transposon Tn10, 227
Kleckner, 1996, Tn10 and IS10 transposition and chromosome rearrangements: Mechanism and regulation in vivo and in vitro, Curr. Topics Microbiol. Immunol., 204, 49
Kramer, 1997, Plasmid rolling circle replication: Identification of the RNA polymerase-directed primer RNA and requirement for DNA polymerase I for lagging strand synthesis, EMBO J., 16, 5784, 10.1093/emboj/16.18.5784
Mac Hattie, 1977, Physical structure and deletion effects of the chloramphenicol resistance element Tn9 in phage lambda, 219
Mahillon, 1998, Insertion Sequences, Microbiol. Mol. Biol. Rev., 62, 725, 10.1128/MMBR.62.3.725-774.1998
McKenna, 1994, Analysis of the single-stranded-DNA bacteriophage ΦX174, refined at a resolution of 3.0 Angstrom, J. Mol. Biol., 237, 517, 10.1006/jmbi.1994.1253
Mendiola, 1989, Specificity of insertion of IS91, an insertion-sequence present in Alpha-hemolysin plasmids of Escherichia coli, Mol. Microbiol., 3, 979, 10.1111/j.1365-2958.1989.tb00247.x
Mendiola, 1992, IS91 transposase is related to the rolling-circle-type replication proteins of the pUB110 family of plasmids, Nucleic Acids Res., 20, 3521, 10.1093/nar/20.13.3521
Mendiola, 1992, DNA-sequence of IS91 and identification of the transposase gene, J. Bacteriol., 174, 1345, 10.1128/jb.174.4.1345-1351.1992
Mendiola, 1994, Differential roles of the transposon termini in IS91 transposition, Proc. Natl. Acad. Sci. USA, 91, 1922, 10.1073/pnas.91.5.1922
Mizuuchi, 1992, Transpositional recombination—Mechanistic insights from studies of Mu and other elements, Ann. Rev. Biochem., 61, 1011, 10.1146/annurev.bi.61.070192.005051
Mizuuchi, 1992, Polynucleotidyl transfer-reactions in transpositional DNA recombination, J. Biol. Chem., 267, 21273, 10.1016/S0021-9258(19)36600-1
Mizuuchi, 1997, Polynucleotidyl transfer reactions in site-specific DNA recombination, Genes Cells, 2, 1, 10.1046/j.1365-2443.1997.970297.x
Motsch, 1984, Replicon fusion mediated by a single-ended derivative of transposon Tn1721, Mol. Gen. Genet., 195, 281, 10.1007/BF00332760
Murphy, 1984, Transposition of Tn554 does not generate a target duplication, Nature, 307, 292, 10.1038/307292a0
Novick, 1998, Contrasting lifestyles of rolling-circle phages and plasmids, Trends Biochem. Sci., 23, 434, 10.1016/S0968-0004(98)01302-4
Plasterk, 1995, Mechanisms of DNA transposition, 18
Platt, 1986, Transcription termination and the regulation of gene expression, Annu. Rev. Biochem., 55, 339, 10.1146/annurev.bi.55.070186.002011
Polard, 1992, Transposase-induced excision and circularization of the bacterial insertion sequence IS911, EMBO J., 11, 5079, 10.1002/j.1460-2075.1992.tb05615.x
Recorbet, 1993, Conditional suicide system of Escherichia coli released into soil that uses the Bacillus subtilis SacB gene, Appl. Environ. Microbiol., 59, 1361, 10.1128/AEM.59.5.1361-1366.1993
Reznikoff, 1993, The Tn5 transposon, Annu. Rev. Microbiol., 47, 945, 10.1146/annurev.mi.47.100193.004501
Rezsohazy, 1993, The IS4 family of insertion sequences: Evidence for a conserved transposase motif, Mol. Microbiol., 9, 1283, 10.1111/j.1365-2958.1993.tb01258.x
Rice, 1998, Tn916 family conjugative transposons and dissemination of antimicrobial resistance determinants, Antimicrob. Agents Chemother., 42, 1871, 10.1128/AAC.42.8.1871
Romanstchuk, 1991, IS801, an insertion-sequence element isolated from Pseudomonas—Syringae pathovar phaseolicola, Mol. Microbiol., 5, 617, 10.1111/j.1365-2958.1991.tb00732.x
Saedler, 1996, Transposable elements, Curr. Topics Microbiol. Immunol., 204, 1
Salyers, 1996, Resistance gene-transfer in anaerobes—New insights, new problems, Clin. Infect. Dis., 23, S36, 10.1093/clinids/23.Supplement_1.S36
Salyers, 1995, Conjugative transposons: An unusual and diverse set of integrated gene transfer elements, Microbiol. Rev., 59, 579, 10.1128/MR.59.4.579-590.1995
Sekine, 1994, Translational control in production of transposase and in transposition of insertion sequence IS3, J. Mol. Biol., 235, 1406, 10.1006/jmbi.1994.1097
Shapiro, 1979, Molecular model for the transposition and replication of bacteriophage Mu and other transposable elements, Proc. Natl. Acad. Sci. USA, 76, 1294, 10.1073/pnas.76.4.1933
Short, 1988, ZAP: A bacteriophage lambda expression vector with in vivo excision properties, Nucleic Acids Res., 16, 7583, 10.1093/nar/16.15.7583
Tavakoli, 1994
Ton-Hoang, 1998, Efficient transposition of IS911 circles in vitro, EMBO J., 17, 1169, 10.1093/emboj/17.4.1169
Ubben, 1986, Tn1721 derivatives for transposon mutagenesis, restriction mapping and nucleotide-sequence analysis, Gene, 41, 145, 10.1016/0378-1119(86)90093-4
van der Ende, 1983, Initiation for complementary strand DNA synthesis on single-stranded plasmid DNA, Nucleic Acids Res., 11, 4957, 10.1093/nar/11.14.4957
Vieira, 1982, The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers, Gene, 19, 259, 10.1016/0378-1119(82)90015-4
Welz, 1993
Wolkow, 1996, Conjugating plasmids are preferred targets for Tn7, Genes Dev., 10, 2145, 10.1101/gad.10.17.2145
Zabala, 1984, Escherichia coli alpha-hemolysin synthesis and export genes are flanked by a direct repetition of IS91-like elements, Mol. Gen. Genet., 197, 90, 10.1007/BF00327927