Hydration and partial compressibility of biological compounds

Biophysical Chemistry - Tập 51 Số 2-3 - Trang 89-109 - 1994
Tigran V. Chalikian1, Armen Sarvazyan2, Kenneth J. Breslauer1
1Department of Chemistry Rutgers, The State University of New Jersey Piscataway, NJ 08855 USA
2Institute of Experimental and Theoretical Biophysics, Russian Academy of Sciences, Pushchino 142292, Russian Federation

Tóm tắt

Từ khóa


Tài liệu tham khảo

Drew, 1981, J. Mol. Biol., 151, 535, 10.1016/0022-2836(81)90009-7

Schneider, 1992, Biopolymers, 32, 725, 10.1002/bip.360320703

Breslauer, 1986, 400

Breslauer, 1992, Methods Enzymol., 211, 533, 10.1016/0076-6879(92)11030-M

Kuntz, 1974, Advan. Protein Chem., 28, 239, 10.1016/S0065-3233(08)60232-6

Privalov, 1989, Annu. Rev. Biophys. Biophys. Chem., 18, 47, 10.1146/annurev.bb.18.060189.000403

Sturtevant, 1994, Curr. Opin. Struct. Biol., 4, 10.1016/S0959-440X(94)90062-0

Murphy, 1992, Advan. Protein Chem., 43, 313, 10.1016/S0065-3233(08)60556-2

Otwinowski, 1988, Nature, 335, 321, 10.1038/335321a0

Quian, 1993, J. Am. Chem. Soc., 115, 1189, 10.1021/ja00056a077

Lawson, 1993, Nature, 366, 178, 10.1038/366178a0

Sarvazyan, 1991, Ann. Rev. Biophys. Biophys. Chem., 20, 321, 10.1146/annurev.bb.20.060191.001541

Kharakoz, 1991, J. Phys. Chem., 95, 5634, 10.1021/j100167a049

Buckin, 1988, Biophys. Chem., 29, 283, 10.1016/0301-4622(88)85050-6

Gavish, 1983, Proc. Natl. Acad. Sci., 80, 750, 10.1073/pnas.80.3.750

Kharakoz, 1993, Biopolymers, 33, 11, 10.1002/bip.360330103

Sarvazyan, 1977, 93

Millero, 1978, J. Phys. Chem., 82, 784, 10.1021/j100496a007

Sarvazyan, 1983, Mol. Biol., 17, 739

Hoiland, 1986, 129

Gekko, 1986, Biochemistry, 25, 6563, 10.1021/bi00369a034

Chalikian, 1993, J. Phys. Chem., 97, 13017, 10.1021/j100151a061

Chalikian, 1994, J. Phys. Chem., 98, 321, 10.1021/j100052a053

Chalikian, 1994, Biopolymers, 34, 541, 10.1002/bip.360340409

Chalikian, 1994, Biochemistry, 33, 2394, 10.1021/bi00175a007

Zamyatnin, 1984, Ann. Rev. Biophys. Bioeng., 13, 145, 10.1146/annurev.bb.13.060184.001045

Hoiland, 1986, 17

Durchschlag, 1986, 45

Heremans, 1982, Ann. Rev. Biophys. Bioeng., 11, 1, 10.1146/annurev.bb.11.060182.000245

Silva, 1993, Ann. Rev. Phys. Chem., 44, 89, 10.1146/annurev.pc.44.100193.000513

Eggers, 1973, Rev. Sci. Instrum., 44, 969, 10.1063/1.1686339

Sarvazyan, 1982, Ultrasonics, 20, 151, 10.1016/0041-624X(82)90032-4

Eggers, 1992, Acustica, 76, 231

Nakajima, 1975, Bull. Chem. Soc. Japan, 48, 788, 10.1246/bcsj.48.788

Cabani, 1979, J. Solution Chem., 8, 11, 10.1007/BF00646805

Hoiland, 1980, J. Solution Chem., 9, 857, 10.1007/BF00667998

Kaulgud, 1979, J. Chem. Faraday Trans. I, 75, 2237, 10.1039/f19797502237

Hoiland, 1976, J. Chem. Faraday Trans. I, 72, 1441, 10.1039/f19767201441

Kharakoz, 1992, J. Acoust. Soc. Am., 92, 287, 10.1121/1.404292

Hoiland, 1978, J. Solution Chem., 7, 587, 10.1007/BF00646036

Chalikian, 1992, J. Phys. Chem., 96, 876, 10.1021/j100181a065

Iqbal, 1987, J. Phys. Chem., 91, 967, 10.1021/j100288a039

Hedwig, 1991, J. Chem. Thermodyn., 23, 1029, 10.1016/S0021-9614(05)80108-9

Hedwig, 1991, J. Solution Chem., 20, 1113, 10.1007/BF00649100

Hedwig, 1993, J. Chem. Thermodynamics, 25, 349, 10.1006/jcht.1993.1035

Sarvazyan, 1980, J. Phys. Chem., 84, 692, 10.1021/j100444a002

Buckin, 1980, J. Phys. Chem., 84, 696, 10.1021/j100444a003

Hemmes, 1980, J. Phys. Chem., 84, 699, 10.1021/j100444a004

Hoiland, 1994, J. Phys. Chem., 88, 6350, 10.1021/j150669a059

Buckin, 1989, Biophys. Chem., 34, 211, 10.1016/0301-4622(89)80060-2

Shilnikov, 1987, J. Lipid Res., 28, 1259, 10.1016/S0022-2275(20)38592-8

Tata, 1992, J. Phys. Chem., 96, 3548, 10.1021/j100187a067

Kharakoz, 1993, J. Phys. Chem., 97, 9844, 10.1021/j100140a049

Jacobson, 1950, Ark. Kemi, 2, 177

Gekko, 1979, J. Phys. Chem., 83, 2706, 10.1021/j100484a006

Buckin, 1989, Nature, 340, 321, 10.1038/340321a0

Buckin, 1989, 45

Kupke, 1973, 1

Barnatt, 1952, J. Chem. Phys., 20, 278, 10.1063/1.1700391

Owen, 1957, J. Phys. Chem., 61, 479, 10.1021/j150550a021

Millero, 1972, 519

Gucker, 1950, J. Am. Chem. Soc., 72, 310, 10.1021/ja01157a082

Bridgman, 1935, J. Chem. Phys., 3, 35, 10.1063/1.1749550

Andersson, 1963, Ark. Kemi, 20, 513

Yayanos, 1972, J. Phys. Chem., 76, 1783, 10.1021/j100656a021

Yayanos, 1993, J. Phys. Chem., 97, 13027, 10.1021/j100151a062

Kell, 1972, 1, 363

Fine, 1973, J. Chem. Phys., 59, 5529, 10.1063/1.1679903

1968

Stuehr, 1965, 2, 351

Leyendekkers, 1985, J. Chem Soc. Faraday Trans. I, 81, 1, 10.1039/f19858100001

Slie, 1966, J. Chem. Phys., 44, 3712, 10.1063/1.1726524

Vedam, 1968, J. Acoust. Soc. Am., 43, 108, 10.1121/1.1910740

Shiio, 1955, J. Am. Chem. Soc., 77, 4980, 10.1021/ja01624a008

Cabani, 1981, J. Solution Chem., 10, 563, 10.1007/BF00646936

Kharakoz, 1992, J. Solution Chem., 21, 569, 10.1007/BF00649565

Abraham, 1982, J. Chem. Soc. Faraday Trans., 178, 197, 10.1039/f19827800197

Guillot, 1991, J. Chem. Phys., 95, 3643, 10.1063/1.460815

Gerstein, 1993, J. Mol. Biol., 230, 641, 10.1006/jmbi.1993.1175

Pierotti, 1965, J. Phys. Chem., 69, 281, 10.1021/j100885a043

Yang, 1993, J. Mol. Biol., 231, 459, 10.1006/jmbi.1993.1294

Dill, 1990, Biochemistry, 29, 7133, 10.1021/bi00483a001

Harvey, 1989, Proteins, 5, 78, 10.1002/prot.340050109

Rashin, 1993, Progr. Biophys. Mol. Biol., 60, 73, 10.1016/0079-6107(93)90017-E

Manning, 1978, Quart. Rev. Biophys., 11, 179, 10.1017/S0033583500002031

Rashin, 1991, J. Comput. Chem., 12, 981, 10.1002/jcc.540120811

Mathieson, 1974, J. Solution Chem., 3, 455, 10.1007/BF00651536

Leyendekkers, 1986, J. Phys. Chem., 90, 5449, 10.1021/j100412a110

Cabani, 1981, J. Chem. Soc. Faraday Trans. I, 77, 2385, 10.1039/f19817702385

Millero, 1977, J. Acoust. Soc. Am., 61, 1492, 10.1121/1.381449

Leyendekkers, 1981, Australian J. Chem., 34, 1785, 10.1071/CH9811785

Millero, 1987, J. Solution Chem., 16, 269, 10.1007/BF00646119

Desnoyers, 1965, J. Chem. Phys., 43, 243, 10.1063/1.1696464

Gill, 1976, Proc. Natl. Acad. Sci. USA, 73, 2955, 10.1073/pnas.73.9.2955

Sturtevant, 1977, Proc. Natl. Acad. Sci. USA, 74, 2236, 10.1073/pnas.74.6.2236

Gill, 1985, J. Phys. Chem., 89, 3758, 10.1021/j100263a034

Baldwin, 1986, Proc. Natl. Acad. Sci. USA, 83, 8069, 10.1073/pnas.83.21.8069

Privalov, 1988, Advan. Protein Chem., 39, 191, 10.1016/S0065-3233(08)60377-0

Murphy, 1990, Science, 247, 559, 10.1126/science.2300815

Shinoda, 1977, J. Phys. Chem., 81, 1300, 10.1021/j100528a016

Jorgensen, 1985, J. Phys. Chem., 89, 3470, 10.1021/j100262a010

Bell, 1937, Trans. Faraday Soc., 33, 496, 10.1039/tf9373300496

Frank, 1945, J. Chem. Phys., 13, 507, 10.1063/1.1723985

Breslauer, 1974, J. Phys. Chem., 78, 2363, 10.1021/j150671a012

Breslauer, 1978, J. Phys. Chem., 82, 675, 10.1021/j100495a011

Geiger, 1979, J. Chem. Phys., 70, 263, 10.1063/1.437241

Jolicoeur, 1986, J. Solution Chem., 15, 109, 10.1007/BF00646283

Soper, 1986, Chem. Phys., 107, 47, 10.1016/0301-0104(86)85058-3

Daggett, 1993, Ann. Rev. Biophys. Biomol. Struct., 22, 353, 10.1146/annurev.bb.22.060193.002033

Sarvazyan, 1979, Biopolymers, 18, 3015, 10.1002/bip.1979.360181209

Iqbal, 1988, J. Biol. Chem., 263, 4159, 10.1016/S0021-9258(18)68903-3

Gekko, 1989, J. Phys. Chem., 93, 426, 10.1021/j100338a082

Iqbal, 1987, J. Phys. Chem., 91, 1935, 10.1021/j100291a050

Richards, 1977, Ann. Rev. Biophys. Bioeng., 6, 151, 10.1146/annurev.bb.06.060177.001055

Lee, 1971, J. Mol. Biol., 55, 379, 10.1016/0022-2836(71)90324-X

No¨lting, 1993, Biochemistry, 32, 12319, 10.1021/bi00097a007

Eden, 1982, Proc. Natl. Acad. Sci. USA, 79, 815, 10.1073/pnas.79.3.815

Kharakoz, 1986, Mol. Biol., 20, 312

Cruanes, 1992, J. Am. Chem. Soc., 114, 9660, 10.1021/ja00050a057

Nikitin, 1984, Mol. Biol., 18, 831

Nikitina, 1990, Mol. Biol., 24, 795

Priev, 1990, Mol. Biol., 24, 629

Kharakoz, 1984, 17

Kharakoz, 1980, Stud. Biophys., 79, 179

Dolgikh, 1985, Eur. Biophys. J., 13, 109, 10.1007/BF00256531

Ptitsyn, 1987, J. Protein Chem., 6, 273, 10.1007/BF00248050

Buckin, 1989, Nucl. Acids Res., 17, 4189, 10.1093/nar/17.11.4189

Alden, 1979, J. Mol. Biol., 132, 411, 10.1016/0022-2836(79)90268-7

Alexeev, 1987, Nature, 325, 821, 10.1038/325821a0

Marky, 1987, Proc. Natl. Acad. Sci. USA, 84, 4359, 10.1073/pnas.84.13.4359

Breslauer, 1987, Proc. Natl. Acad. Sci. USA, 84, 8922, 10.1073/pnas.84.24.8922

Marky, 1989, Biochemistry, 28, 9982, 10.1021/bi00452a016