High-throughput SNP genotyping with the GoldenGate assay in maize
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Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403–410
Bernardo R (2008) Molecular markers and selection for complex traits in plants: learning from the last 20 years. Crop Sci 48:1649–1664
Blanc G, Wolfe KH (2004) Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes. Plant Cell 16:1667–1678
Buckler ES, Stevens NM (2005) Maize Origins, Domestication, and selection. In: Motley TJ, Zerega N, Cross H (eds) Darwin’s harvest. Columbia University Press, New York, pp 67–90
Chander S, Guo YQ, Yang XH et al (2008) Using molecular markers to identify two major loci controlling carotenoid contents in maize grain. Theor Appl Genet 116:223–233
Fan JB, Gunderson KL, Bibikova M et al (2006b) Illumina universal bead arrays. Methods Enzymol 410:57–73
Gao SB, Martinez C, Skinner DJ et al (2008) Development of a seed DNA-based genotyping system for marker-assisted selection in maize. Mol Breeding 22:477–494
Gupta PK, Rustgi S, Mir RR (2008) Array-based high-throughput DNA markers for crop improvement. Heredity 101:5–18
Hamblin MT, Warburton ML, Buckler ES (2007) Empirical comparison of simple sequence repeats and single nucleotide polymorphisms in assessment of maize diversity and relatedness. PLoS ONE 2:e1367
Helentjaris T, Slocum M, Wright S et al (1986) Construction of genetic linkage maps in maize and tomato using restriction fragment length polymorphisms. Theor Appl Genet 72:761–769
Helentjaris T, Weber D, Wright S (1988) Identification of the genomic locations of duplicate nucleotide sequences in maize by analysis of restriction fragment length polymorphisms. Genetics 118:353–363
Hyten DL, Song Q, Choi IY et al (2008) High-throughput genotyping with the GoldenGate assay in the complex genome of soybean. Theor Appl Genet 116:945–952
Lincoln S, Daly M, Lander E (1992) Constructing genetics maps with MAPMAKER/EXP 3.0. Whitehead Institute Technical Report, Whitehead Institute, Cambridge
Liu K, Goodman MM, Muse S et al (2003) Genetic structure and diversity among maize inbred lines as inferred from DNA microsatellites. Genetics 165:2117–2128
Lu H, Bernardo R (2001) Molecular diversity among current and historical maize inbreds. Theor Appl Genet 103:613–617
Ma XQ, Tang JH, Teng WT et al (2007) Epistatic interaction is an important genetic basis of grain yield and its components in maize. Mol Breeding 20:41–51
McMullen MM, Kresovich S, Villeda HS et al (2009) Genetic properties of the maize nested association mapping population. Science 325:737–740
Rostoks N, Ramsay L, MacKenzie K et al (2006) Recent history of artificial outcrossing facilitates whole-genome association mapping in elite inbred crop varieties. Proc Natl Acad Sci USA 103:18656–18661
Saghai Maroof MA, Soliman KM, Jorgensen RA et al (1984) Ribosomal DNA spacer length polymorphisms in barley: Mendelian inheritance, chromosomal location, and population dynamics. Proc Natl Acad Sci USA 81:8014–8018
Senior L, Lynn M, Heun M (1993) Mapping maize microsatellites and polymerase chain reaction confirmation of the targeted repeats using a CT primer. Genome 36:884–889
Song XF, Song TM, Dai JR et al (2004) QTL mapping of kernel oil concentration with high-oil maize by SSR markers. Maydica 49:41–48
Teng WT, Can JS, Chen YH et al (2004) Analysis of maize heterotic groups and patterns during past decade in China. Sci Agric Sin 37:1804–1811