HIV-1 subtypes and differences in heterosexual HIV transmission among HIV-discordant couples in Rakai, Uganda

Peeters, 2001, The genetic variability of HIV-1 and its implications, Transfus Clin Biol, 8, 222, 10.1016/S1246-7820(01)00131-8

Simon, 1998, Identification of a new human immunodeficiency virus type 1 distinct from group M and group O, Nat Med, 4, 1032, 10.1038/2017

McCutchan, 2000, Understanding the genetic diversity of HIV-1, AIDS, 14, S31

Tscherning, 1998, Differences in chemokine coreceptor usage between genetic subtypes of HIV-1, Virology, 241, 181, 10.1006/viro.1997.8980

De, 1994, Syncytium-inducing and nonsyncytium-inducing capacity of human immunodeficiency virus type 1 subtypes other than B: phenotypic and genotypic characteristics. WHO Network for HIV Isolation and Characterization, AIDS Res Hum Retroviruses, 10, 1387, 10.1089/aid.1994.10.1387

Kaleebu, 2007, Relation between chemokine receptor use, disease stage, and HIV-1 subtypes A and D: results from a rural Ugandan cohort., J Acquir Immune Defic Syndr, 45, 28, 10.1097/QAI.0b013e3180385aa0

Kaleebu, 2002, Effect of human immunodeficiency virus (HIV) type 1 envelope subtypes A and D on disease progression in a large cohort of HIV-1-positive persons in Uganda, J Infect Dis, 185, 1244, 10.1086/340130

Baeten, 2007, HIV-1 subtype D infection is associated with faster disease progression than subtype A in spite of similar plasma HIV-1 loads, J Infect Dis, 195, 1177, 10.1086/512682

Vasan, 2006, Different rates of disease progression of HIV type 1 infection in Tanzania based on infecting subtype, Clin Infect Dis, 42, 843, 10.1086/499952

Kiwanuka, 2008, Effect of HIV-1 subtypes on disease progression in a cohort of incident cases infected with pure subtypes, recombinants, and multiple subtypes, Rakai, Uganda, J Infect Dis, 197, 707, 10.1086/527416

Kunanusont, 1995, HIV-1 subtypes and male-to-female transmission in Thailand, Lancet, 345, 1078, 10.1016/S0140-6736(95)90818-8

Hu, 1999, What role does HIV-1 subtype play in transmission and pathogenesis? An epidemiological perspective, AIDS, 13, 873, 10.1097/00002030-199905280-00002

Yirrell, 2004, HIV-1 subtype dynamics over 10 years in a rural Ugandan cohort, Int J STD AIDS, 15, 103, 10.1258/095646204322764299

Wawer, 1999, Control of sexually transmitted diseases for AIDS prevention in Uganda: a randomised community trial. Rakai Project Study Group, Lancet, 353, 525, 10.1016/S0140-6736(98)06439-3

Wawer, 1998, A randomized, community trial of intensive sexually transmitted disease control for AIDS prevention, Rakai, Uganda, AIDS, 12, 1211, 10.1097/00002030-199810000-00014

Kiwanuka, 2004, Knowledge about vaccines and willingness to participate in preventive HIV vaccine trials: a population-based study, Rakai, Uganda, J Acquir Immune Defic Syndr, 36, 721, 10.1097/00126334-200406010-00009

Wawer, 2005, Rates of HIV-1 transmission per coital act, by stage of HIV-1 infection, in Rakai, Uganda, J Infect Dis, 191, 1403, 10.1086/429411

Quinn, 2000, Viral load and heterosexual transmission of human immunodeficiency virus type 1. Rakai Project Study Group, N Engl J Med, 342, 921, 10.1056/NEJM200003303421303

Yang, 2000, Detection of diverse variants of human immunodeficiency virus-1 groups M, N, and O and simian immunodeficiency viruses from chimpanzees by using generic pol and env primer pairs, J Infect Dis, 181, 1791, 10.1086/315439

Yang, 2001, Predominance of HIV type 1 subtype G among commercial sex workers from Kinshasa, Democratic Republic of Congo, AIDS Res Hum Retroviruses, 17, 361, 10.1089/08892220150503726

Thompson, 1994, CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Res, 22, 4673, 10.1093/nar/22.22.4673

Carr, 1996, Full-length sequence and mosaic structure of a human immunodeficiency virus type 1 isolate from Thailand, J Virol, 70, 5935, 10.1128/JVI.70.9.5935-5943.1996

Arroyo, 2004, HIV type 1 subtypes among blood donors in the Mbeya region of southwest Tanzania, AIDS Res Hum Retroviruses, 20, 895, 10.1089/0889222041725235

Hoelscher, 2002, Detection of HIV-1 subtypes, recombinants, and dual infections in east Africa by a multiregion hybridization assay, AIDS, 16, 2055, 10.1097/00002030-200210180-00011

Zeger, 1988, Models for longitudinal data: a generalized estimating equation approach, Biometrics, 44, 1049, 10.2307/2531734

Gray, 2001, Probability of HIV-1 transmission per coital act in monogamous, heterosexual, HIV-1-discordant couples in Rakai, Uganda, Lancet, 357, 1149, 10.1016/S0140-6736(00)04331-2

Morgan, 2001, The stability between two HIV-1 RNA measurements one year apart and the relationship with HIV subtype in rural Uganda, Int J STD AIDS, 12, 116, 10.1258/0956462011916758