Groundnut (Arachis hypogaea) nodule Rhizobium and passenger endophytic bacterial cultivable diversity and their impact on plant growth promotion

Rhizosphere - Tập 17 - Trang 100309 - 2021
R. Preyanga1, R. Anandham1, R. Krishnamoorthy2, M. Senthilkumar3, N.O. Gopal1, A. Vellaikumar4, S. Meena5
1Department of Agricultural Microbiology, Tamil Nadu Agricultural University (TNAU), Coimbatore, Tamil Nadu, India
2Department of Crop Management, Vanavarayar Institute of Agriculture, Pollachi, Tamil Nadu, India
3Agricultural College and Research Institute, TNAU, Eachangkottai, Tamil Nadu, India
4Department of Biotechnology, Agricultural College and Research Institute TNAU, Madurai, Tamil Nadu, India
5Department of Soil Science and Agricultural Chemistry, TNAU, Coimbatore, Tamil Nadu, India

Tài liệu tham khảo

Ahmed, 2018, Assessing root nodule microsymbionts in healthy and declined rooibos (Aspalathus linearis burm f.) at a plantation in South Africa, J. Plant Interact., 13, 277, 10.1080/17429145.2018.1473514 Anandham, 2007, Potential for plant growth promotion in groundnut (Arachis hypogaea L.) cv. ALR-2 by co-inoculation of sulfur-oxidizing bacteria and Rhizobium, Microbiol. Res., 162, 139, 10.1016/j.micres.2006.02.005 Ardley, 2012, Microvirga lupini sp. nov., Microvirga lotononidis sp. nov., and Microvirga zambiensis sp. nov. are Alphaproteobacterial root nodule bacteria that specifically nodulate and fix nitrogen with geographically and taxonomically separate legume hosts, Int. J. Syst. Evol. Microbiol., 62, 2579, 10.1099/ijs.0.035097-0 Ardley, 2013, Nodule morphology, symbiotic specificity and association with unusual rhizobia are distinguishing features of the genus Listia within the southern African crotalarioid clade Lotononis sl, Ann. Bot., 112, 1, 10.1093/aob/mct095 Bai, 2002, Isolation of plant-growth-promoting Bacillus strains from soybean root nodules, Can. J. Microbiol., 48, 230, 10.1139/w02-014 Benito, 2017, Monitoring the colonization and infection of legume nodules by Micromonospora in co-inoculation experiments with rhizobia, Sci. Rep., 7, 11051, 10.1038/s41598-017-11428-1 Boukhatem, 2016, Nodular bacterial endophyte diversity associated with native Acacia spp. in desert region of Algeria, Afr. J. Microbiol. Res., 10, 634, 10.5897/AJMR2015.7678 Chebotar, 2001, Production of growth-promoting substances and high colonization ability of rhizobacteria enhance the nitrogen fixation of soybean when coinoculated with Bradyrhizobium japonicum, Biol. Fertil. Soils, 34, 427, 10.1007/s00374-001-0426-4 Compant, 2008, Endophytic colonization of Vitis vinifera L. by Burkholderia phytofirmans strain PsJN: from the rhizosphere to inflorescence tissues, FEMS Microbiol. Ecol., 63, 84, 10.1111/j.1574-6941.2007.00410.x Dekaka, 2020, Endophytic passenger bacteria associated with Genista cinerea nodules growing in North African drylands, Rhizosphere, 14, 100205, 10.1016/j.rhisph.2020.100205 Fox, 2011, Enhanced nodulation and symbiotic effectiveness of Medicago truncatula when co-inoculated with Pseudomonas fluorescens WSM3457 and Ensifer (Sinorhizobium) medicae WSM419, Plant Soil, 348, 245, 10.1007/s11104-011-0959-8 Gordon, 1951, Colorimetric estimation of indole acetic acid, Plant Physiol., 26, 192, 10.1104/pp.26.1.192 Hardoim, 2015, The hidden world within plants: ecological and evolutionary considerations for defining functioning of microbial endophytes, Microbiol. Mol. Biol. Rev., 79, 293, 10.1128/MMBR.00050-14 Hardoim, 2008, Properties of bacterial endophytes and their proposed role in plant growth, Trends Microbiol., 16, 463, 10.1016/j.tim.2008.07.008 Hardy, 1968, The acetylene-ethylene assay for N2 fixation: laboratory and field evaluation, Plant Physiol., 43, 1185, 10.1104/pp.43.8.1185 Howieson, 2016, 97 Hung, 2004, Isolation and characterization of endophytic bacteria in soybean (Glycine sp.), Omonrice, 12, 92 Iglesias-Rios, 2014, Measuring diversity: looking for processes that generate diversity, Nat conservacao, 12, 156, 10.1016/j.ncon.2014.04.001 Ju, 2020, Rhizobacteria inoculation benefits nutrient availability for phytostabilization in copper contaminated soil: drivers from bacterial community structures in rhizosphere, Appl. Soil Ecol., 150, 103450, 10.1016/j.apsoil.2019.103450 Kamilova, 2006, Effects of the tomato pathogen Fusarium oxysporum f. sp radicislycopersici and of the biocontrol bacterium Pseudomonas fluorescens WCS365 on the composition of organic acids and sugars in tomato root exudate, MPMI (Mol. Plant-Microbe Interact.), 19, 1121, 10.1094/MPMI-19-1121 Kobayashi, 2000, Bacterial endophytes and their effects on plants and uses in agriculture, 99 Kong, 2015, Rhizobial symbiosis effect on the growth, metal uptake, and antioxidant responses of Medicago lupulina under copper stress, Environ. Sci. Pollut. Res., 22, 12479, 10.1007/s11356-015-4530-7 Korir, 2017, Co-inoculation effect of rhizobia and plant growth promoting rhizobacteria on common bean growth in a low phosphorus soil, Front. Plant Sci., 8, 141, 10.3389/fpls.2017.00141 Korenblum, 2020, Rhizosphere microbiome mediates systemic root metabolite exudation by root-to-root signaling, Proc. Natl. Acad. Sci. U. S. A, 117, 3874, 10.1073/pnas.1912130117 Krishnamoorthy, 2018, Diversity of culturable methylotrophic bacteria in different genotypes of groundnut and their potential for plant growth promotion, 3 Biotech, 8, 275, 10.1007/s13205-018-1291-2 Kumar, 2017 Lok, 2006, Nodulation of the legume Pterocarpus indicus by diverse strains of rhizobia, J. Trop For. Sci., 18, 188 Lu, 2017, Co-existence of Rhizobia and diverse non-rhizobial bacteria in the rhizosphere and nodules of Dalbergia odorifera seedlings inoculated with Bradyrhizobium elkanii, Rhizobium multihospitium–like and Burkholderia pyrrocinia–like strains, Front. Microbiol., 8, 2255, 10.3389/fmicb.2017.02255 Matse, 2020, Effects of coinoculation of Rhizobium with plant growth promoting rhizobacteria on the nitrogen fixation and nutrient uptake of Trifolium repens in low phosphorus soil, J. Plant Nutr., 43, 739, 10.1080/01904167.2019.1702205 Narula, 2013, Molecular diversity of root and nodule endophytic bacteria from field pea (Pisum sativum), Legume Res., 36, 344 Palaniappan, 2010, Isolation and characterization of plant growth promoting endophytic bacterial isolates from root nodule of Lespedeza sp, Biol. Fertil. Soils, 46, 807, 10.1007/s00374-010-0485-5 Pastor-Bueis, 2019, Formulation of a highly effective inoculant for common bean based on an autochthonous elite strain of Rhizobium leguminosarum bv. phaseoli, and genomic-based insights into its agronomic performance, Front. Microbiol., 10, 2724, 10.3389/fmicb.2019.02724 Payne, 1993, Iron acquisition in microbial pathogenesis, Trends Microbiol., 1, 66, 10.1016/0966-842X(93)90036-Q Penrose, 2003, Methods for isolating and characterizing ACC deaminase-containing plant growth-promoting rhizobacteria, Physiol. Plantarum, 118, 10, 10.1034/j.1399-3054.2003.00086.x Perrig, 2007, Plant-growth-promoting compounds produced by two agronomically important strains of Azospirillum brasilense, and implications for inoculant formulation, Appl. Microbiol. Biotechnol., 75, 1143, 10.1007/s00253-007-0909-9 Pikovskaya, 1948, Mobilization of phosphorus in soil in connection with vital activity of some microbial species, Mikrobiologiya, 17, 362 Poonguzhali, 2005, Effects of co-cultures, containing N-fixer and P-solubilizer, on the growth and yield of pearl millet (Pennisetum glaucum (L.) R. Br.) and blackgram (Vigna mungo L.), J. Microbiol. Biotechnol., 15, 903 Rosenblueth, 2006, Bacterial endophytes and their interactions with hosts, Mol. Plant Microbe Interact., 19, 827, 10.1094/MPMI-19-0827 Saharan, 2011, Plant growth promoting rhizobacteria: a critical review, Life Sci. Med. Res., 21, 30 Saravanan, 2003, Development of integrated approach to manage the fusarial wilt of banana, J. Crop Prot., 22, 1117, 10.1016/S0261-2194(03)00146-7 Schwyn, 1987, Universal chemical assay for the detection and determination of siderophores, Anal. Biochem., 160, 47, 10.1016/0003-2697(87)90612-9 Sharon, 2016, Isolation of efficient phosphate solubilizing bacteria capable of enhancing tomato plant growth, J. Soil Sci. Plant Nutr., 16, 525 Stajkovic, 2011, Improvement of common bean growth by co-inoculation with Rhizobium and plant growth promoting bacteria, Rom. Biotechnol. Lett., 16, 5919 Sturz, 2000, Bacterial endophytes: potential role in developing sustainable systems of crop production, Crit. Rev. Plant Sci., 19, 1, 10.1080/07352680091139169 Sturz, 1997, Biodiversity of endophytic bacteria which colonize red clover nodules, roots, stems and foliage and their influence on host growth, Biol. Fertil. Soils, 25, 13, 10.1007/s003740050273 Tariq, 2012, Non-rhizobial bacteria for improved nodulation and grain yield of mung bean [Vigna radiata (L.) Wilczek], Afr. J. Biotechnol., 11, 15012 Trujillo, 2010, The genus Micromonospora is widespread in legume root nodules: the example of Lupinus angustifolius, Int. J. Syst. Evol. Microbiol., 4, 1265 Vessey, 2003, Plant growth promoting rhizobacteria as biofertilizers, Plant Soil, 255, 571, 10.1023/A:1026037216893 Yan, 2018, Isolation, diversity, and growth-promoting activities of endophytic bacteria from tea cultivars of zijuan and yunkang-10, Front. Microbiol., 9, 1848, 10.3389/fmicb.2018.01848 Yoon, 2017, Introducing EzBioCloud: a taxonomically united database of 16S rRNA and whole genome assemblies, Int. J. Syst. Evol. Microbiol., 67, 1613, 10.1099/ijsem.0.001755