Glycoproteomics based on tandem mass spectrometry of glycopeptides

Mechref, 2002, Chem. Rev., 102, 321, 10.1021/cr0103017

Harvey, 2003, Int. J. Mass Spectrom., 226, 1, 10.1016/S1387-3806(02)00968-5

Zaia, 2004, Mass Spectrom. Rev., 23, 161, 10.1002/mas.10073

Morelle, 2005, Curr. Anal. Chem., 1, 29, 10.2174/1573411052948460

Medzihradszky, 2005, Methods Enzymol., 405, 50, 10.1016/S0076-6879(05)05003-2

Medzihradszky, 2005, Methods Enzymol., 402, 209, 10.1016/S0076-6879(05)02007-0

Domon, 2006, Science, 312, 212, 10.1126/science.1124619

Hirabayashi, 2004, Glycoconj. J., 21, 35, 10.1023/B:GLYC.0000043745.18988.a1

Fan, 2004, Anal. Biochem., 332, 178, 10.1016/j.ab.2004.05.038

Bunkenborg, 2004, Proteomics, 4, 454, 10.1002/pmic.200300556

Wang, 2006, Mol. Cell. Proteomics, 5, 560, 10.1074/mcp.D500013-MCP200

Yang, 2005, J. Chromatogr. A, 1070, 57, 10.1016/j.chroma.2005.02.034

Yang, 2004, J. Chromatogr. A, 1053, 79, 10.1016/j.chroma.2004.08.150

Qiu, 2005, Anal. Chem., 77, 7225, 10.1021/ac050554q

Qiu, 2005, Anal. Chem., 77, 2802, 10.1021/ac048751x

Sleat, 2005, Proteomics, 5, 1520, 10.1002/pmic.200401054

Sleat, 2006, Mol. Cell. Proteomics, 5, 923, 10.1074/mcp.T500040-MCP200

Alvarez-Manilla, 2006, J. Proteome Res., 5, 701, 10.1021/pr050275j

Hagglund, 2004, J. Proteome Res., 3, 556, 10.1021/pr034112b

Zhang, 2003, Nat. Biotechnol., 21, 660, 10.1038/nbt827

Liu, 2005, J. Proteome Res., 4, 2070, 10.1021/pr0502065

Lewandrowski, 2006, Mol. Cell. Proteomics, 5, 226, 10.1074/mcp.M500324-MCP200

Zhang, 2005, Mol. Cell. Proteomics, 4, 144, 10.1074/mcp.M400090-MCP200

Kaji, 2003, Nat. Biotechnol., 21, 667, 10.1038/nbt829

Morelle, 2006, Rapid Commun. Mass Spectrom., 20, 331, 10.1002/rcm.2289

Uematsu, 2005, Mol. Cell. Proteomics, 4, 1977, 10.1074/mcp.M500203-MCP200

Wang, 2006, Glycobiology, 16, 614, 10.1093/glycob/cwj091

Takegawa, 2006, J. Chromatogr. A, 1113, 177, 10.1016/j.chroma.2006.02.010

Wada, 2004, Anal. Chem., 76, 6560, 10.1021/ac049062o

Tajiri, 2005, Glycobiology, 15, 1332, 10.1093/glycob/cwj019

Larsen, 2005, Mol. Cell. Proteomics, 4, 107, 10.1074/mcp.M400068-MCP200

Cummings, 1982, J. Biol. Chem., 257, 11235, 10.1016/S0021-9258(18)33747-5

Tachibana, 2006, Glycobiology, 16, 46, 10.1093/glycob/cwj038

Sleat, 2006, Mol. Cell. Proteomics, 5, 686, 10.1074/mcp.M500343-MCP200

Hirabayashi, 2002, J. Biomol. Tech., 13, 205

Wuhrer, 2005, J. Chromatogr. B, 825, 124, 10.1016/j.jchromb.2005.01.030

Wuhrer, 2005, Anal. Chem., 77, 886, 10.1021/ac048619x

Sparbier, 2005, J. Biomol. Tech., 16, 407

Rawn, 1974, Biochemistry, 13, 3124, 10.1021/bi00712a019

Packer, 1998, Glycoconj. J., 15, 737, 10.1023/A:1006983125913

Klampfl, 2006, Electrophoresis, 27, 3, 10.1002/elps.200500523

Zamfir, 2001, Electrophoresis, 22, 2448, 10.1002/1522-2683(200107)22:12<2448::AID-ELPS2448>3.0.CO;2-A

Bindila, 2005, Electrophoresis, 26, 1488, 10.1002/elps.200410307

Amon, 2006, Electrophoresis, 27, 1209, 10.1002/elps.200500725

Domon, 1988, Glycoconj. J., 5, 253, 10.1007/BF01049915

Huddleston, 1993, Anal. Chem., 65, 877, 10.1021/ac00055a009

Carr, 1993, Protein Sci., 2, 183, 10.1002/pro.5560020207

Schindler, 1995, Protein Sci., 4, 791, 10.1002/pro.5560040419

Medzihradszky, 1997, Anal. Chem., 69, 3986, 10.1021/ac970372z

Rogalski, 2005, Rapid Commun. Mass Spectrom., 19, 77, 10.1002/rcm.1740

Sullivan, 2004, Anal. Chem., 76, 3112, 10.1021/ac035427d

Wuhrer, 2005, Biochim. Biophys. Acta, 1723, 229, 10.1016/j.bbagen.2005.02.013

Ritchie, 2002, J. Am. Soc. Mass Spectrom., 13, 1065, 10.1016/S1044-0305(02)00421-X

Jebanathirajah, 2003, J. Am. Soc. Mass Spectrom., 14, 777, 10.1016/S1044-0305(03)00263-0

Ball, 2006, Mol. Cell. Proteomics, 5, 313, 10.1074/mcp.M500314-MCP200

Settineri, 1990, Biomed. Environ. Mass Spectrom., 19, 665, 10.1002/bms.1200191106

Medzihradszky, 1990, Biomed. Environ. Mass Spectrom., 19, 777, 10.1002/bms.1200191205

Medzihradszky, 1996, J. Am. Soc. Mass Spectrom., 7, 319, 10.1016/1044-0305(95)00682-6

Kieliszewski, 1995, J. Biol. Chem., 270, 2541, 10.1074/jbc.270.6.2541

Demelbauer, 2004, Rapid. Commun. Mass Spectrom., 18, 1575, 10.1002/rcm.1521

Demelbauer, 2004, Electrophoresis, 25, 2026, 10.1002/elps.200305936

Wang, 2003, Anal. Biochem., 314, 266, 10.1016/S0003-2697(02)00693-0

Gielens, 2005, Biochem. Biophys. Res. Commun., 331, 562, 10.1016/j.bbrc.2005.03.217

Wuhrer, 2006, FEBS J., 273, 2276, 10.1111/j.1742-4658.2006.05242.x

Jiang, 2004, J. Am. Soc. Mass Spectrom., 15, 750, 10.1016/j.jasms.2004.01.009

Liu, 2001, Anal. Chem., 73, 5875, 10.1021/ac0106748

Sandra, 2004, J. Am. Soc. Mass Spectrom., 15, 413, 10.1016/j.jasms.2003.11.003

Biemann, 1992, Annu. Rev. Biochem., 61, 977, 10.1146/annurev.bi.61.070192.004553

Itoh, 2005, J. Chromatogr. A, 1094, 105, 10.1016/j.chroma.2005.07.100

Stimson, 1999, Biochemistry, 38, 4885, 10.1021/bi982330q

Satomi, 2004, Rapid Commun. Mass Spectrom., 18, 2983, 10.1002/rcm.1718

Satomi, 2004, FEBS Lett., 576, 51, 10.1016/j.febslet.2004.08.061

Imre, 2005, J. Mass Spectrom., 40, 1472, 10.1002/jms.938

Harazono, 2006, Anal. Biochem., 348, 259, 10.1016/j.ab.2005.10.036

Nimtz, 2004, Biochim. Biophys. Acta, 1675, 71, 10.1016/j.bbagen.2004.08.007

Zhang, 2004, Phytochemistry, 65, 1575, 10.1016/j.phytochem.2004.03.031

Nemeth, 2001, Biochemistry, 40, 3109, 10.1021/bi002313c

Henriksson, 2003, Biochem. J., 375, 61, 10.1042/bj20030485

Marxen, 2003, Biochim. Biophys. Acta, 1650, 92, 10.1016/S1570-9639(03)00203-6

Deguchi, 2006, Rapid Commun. Mass Spectrom., 20, 741, 10.1002/rcm.2368

Hanisch, 1998, J. Mass Spectrom., 33, 358, 10.1002/(SICI)1096-9888(199804)33:4<358::AID-JMS642>3.0.CO;2-3

Alving, 1998, J. Mass Spectrom., 33, 1124, 10.1002/(SICI)1096-9888(1998110)33:11<1124::AID-JMS734>3.0.CO;2-H

Alving, 1999, J. Mass Spectrom., 34, 395, 10.1002/(SICI)1096-9888(199904)34:4<395::AID-JMS771>3.0.CO;2-1

Muller, 1997, J. Biol. Chem., 272, 24780, 10.1074/jbc.272.40.24780

Schmitt, 1999, J. Biol. Chem., 274, 11945, 10.1074/jbc.274.17.11945

Chalabi, 2006, Biochemistry, 45, 637, 10.1021/bi0512804

Muller, 1999, J. Biol. Chem., 274, 18165, 10.1074/jbc.274.26.18165

Macek, 2001, Rapid Commun. Mass Spectrom., 15, 771, 10.1002/rcm.298

Chalkley, 2001, J. Am. Soc. Mass Spectrom., 12, 1106, 10.1016/S1044-0305(01)00295-1

Chalkley, 2003, Mol. Cell. Proteomics, 2, 182, 10.1074/mcp.M300027-MCP200

Vosseller, 2006, Mol. Cell. Proteomics, 5, 923, 10.1074/mcp.T500040-MCP200

Greis, 1996, Anal. Biochem., 234, 38, 10.1006/abio.1996.0047

Gonzales de Peredo, 2002, Mol. Cell. Proteomics, 1, 11, 10.1074/mcp.M100011-MCP200

Hofsteenge, 2001, J. Biol. Chem., 276, 6485, 10.1074/jbc.M008073200

Gauthier, 1991, Anal. Chim. Acta, 246, 211, 10.1016/S0003-2670(00)80678-9

Woodin, 1978, J. Am. Chem. Soc., 100, 3248, 10.1021/ja00478a065

Little, 1994, Anal. Chem., 66, 2809, 10.1021/ac00090a004

Froesch, 2003, Rapid Commun. Mass Spectrom., 17, 2822, 10.1002/rcm.1273

Froesch, 2004, Rapid Commun. Mass Spectrom., 18, 3084, 10.1002/rcm.1733

Hakansson, 2001, Anal. Chem., 73, 4530, 10.1021/ac0103470

Hakansson, 2003, Anal. Chem., 75, 3256, 10.1021/ac030015q

Adamson, 2006, J. Proteome Res., 5, 493, 10.1021/pr0504081

Zubarev, 1998, J. Am. Chem. Soc., 120, 3265, 10.1021/ja973478k

Beu, 1993, J. Am. Soc. Mass Spectrom., 4, 557, 10.1016/1044-0305(93)85017-R

Cooper, 2005, Mass Spectrom. Rev., 24, 201, 10.1002/mas.20014

Baba, 2004, Anal. Chem., 76, 4263, 10.1021/ac049309h

Breuker, 2002, Eur. J. Mass Spectrom., 8, 177, 10.1255/ejms.487

Hakansson, 2001, Anal. Chem., 73, 3605, 10.1021/ac010141z

Kjeldsen, 2002, Chem. Phys. Lett., 356, 201, 10.1016/S0009-2614(02)00149-5

Zubarev, 2002, Eur. J. Mass Spectrom., 8, 337, 10.1255/ejms.517

Tsybin, 2001, Rapid Commun. Mass Spectrom., 15, 1849, 10.1002/rcm.448

Palmblad, 2002, Rapid Commun. Mass Spectrom., 16, 988, 10.1002/rcm.667

Tsybin, 2002, Eur. J. Mass Spectrom., 8, 389, 10.1255/ejms.514

Nielsen, 2005, Mol. Cell. Proteomics, 4, 835, 10.1074/mcp.T400022-MCP200

Cooper, 2005, J. Proteome Res., 4, 1538, 10.1021/pr050090c

Kjeldsen, 2003, Anal. Chem., 75, 2355, 10.1021/ac026295b

Mirgorodskaya, 1999, Anal. Chem., 71, 4431, 10.1021/ac990578v

Haselmann, 2001, Anal. Chem., 73, 2998, 10.1021/ac0015523

Mormann, 2005, Eur. J. Mass Spectrom., 11, 497, 10.1255/ejms.738

Renfrow, 2005, J. Biol. Chem., 280, 19136, 10.1074/jbc.M411368200

Syka, 2004, Proc. Natl. Acad. Sci. U.S.A., 101, 9528, 10.1073/pnas.0402700101

Hogan, 2005, J. Proteome Res., 4, 628, 10.1021/pr049770q

Pitteri, 2005, Anal. Chem., 77, 1831, 10.1021/ac0483872

Wuhrer, 2004, Rapid Commun. Mass Spectrom., 18, 1741, 10.1002/rcm.1546

Nishimura, 2004, Angew. Chem. Int. Ed. Engl., 44, 91, 10.1002/anie.200461685

Kurogochi, 2004, Anal. Chem., 76, 6097, 10.1021/ac049294n

Kurogochi, 2004, Angew. Chem. Int. Ed. Engl., 43, 4071, 10.1002/anie.200460020

Krokhin, 2004, Rapid Commun. Mass Spectrom., 18, 2020, 10.1002/rcm.1585

Krokhin, 2005, J. Biomol. Tech., 16, 429

Bykova, 2006, Anal. Chem., 78, 1093, 10.1021/ac0512711

Takemori, 2006, Electrophoresis, 27, 1394, 10.1002/elps.200500324

Khoo, 1997, Glycobiology, 7, 663, 10.1093/glycob/7.5.663

Harvey, 2002, Anal. Chem., 74, 734, 10.1021/ac0109321

Wuhrer, 2006, Rapid Commun. Mass Spectrom., 20, 1747, 10.1002/rcm.2509

Geyer, 1998, Acta Anat., 161, 18, 10.1159/000046449

Geyer, 1994, Methods Enzymol., 230, 86, 10.1016/0076-6879(94)30009-7

Zhang, 2005, Anal. Chem., 77, 6263, 10.1021/ac050725r

Ashline, 2005, Anal. Chem., 77, 6250, 10.1021/ac050724z

Goldberg, 2005, Proteomics, 5, 865, 10.1002/pmic.200401071

Kameyama, 2006, J. Proteome Res., 5, 808, 10.1021/pr0503937

Kameyama, 2005, Anal. Chem., 77, 4719, 10.1021/ac048350h