Genomic screen and follow‐up analysis for autistic disorder

Wiley - Tập 114 Số 1 - Trang 99-105 - 2002
Yujie Shao1, Chantelle M. Wolpert1, Kimberly L. Raiford1, Marisa M. Menold1, S. L. Donnelly1, Sarah A. Ravan2, Meredyth P. Bass1, Cate McClain3, Lennart von Wendt4, Jeffery M. Vance1, Ruth H. Abramson2, Harry H. Wright2, Allison Ashley‐Koch1, John R. Gilbert1, Robert DeLong5, Michael L. Cuccaro2, Margaret A. Pericak‐Vance1
1Department of Medicine and Center for Human Genetics, Duke University Medical Center, Durham, North Carolina
2W.S. Hall Psychiatric Institute, University of South Carolina, Columbia, South Carolina
3University of New Mexico, Albuquerque, New Mexico
4Helsinki University Central Hospital, Helsinki, Finland.
5Division of Neurology, Pediatrics, Duke University Medical Center, Durham, North Carolina

Tóm tắt

AbstractAutistic disorder (AutD) is a neurodevelopmental disorder characterized by significant impairment in social, communicative, and behavioral functioning. A genetic basis for AutD is well established with as many as 10 genes postulated to contribute to its underlying etiology. We have completed a genomic screen and follow‐up analysis to identify potential AutD susceptibility loci. In stage one of the genome screen, 52 multiplex families (two or more AutD affected individuals/family) were genotyped with 352 genetic markers to yield an approximately 10 centimorgan (cM) grid, inclusive of the X chromosome. The selection criterion for follow‐up of interesting regions was a maximum heterogeneity lod score (MLOD) or a maximum nonparametric sib pair lod score (MLS) of at least 1.0. Eight promising regions were identified on chromosomes 2, 3, 7, 15, 18, 19, and X. In the stage two follow‐up study we analyzed an additional 47 multiplex families (total = 99 families). Regions on chromosomes 2, 3, 7, 15, 19, and X remained interesting (MLOD ≥ 1.0) in stage two analysis. The peak lod score regions on chromosomes 2, 7, 15, 19, and X overlap previously reported peak linkage areas. The region on chromosome 3 is unique. © 2001 Wiley‐Liss, Inc.

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Tài liệu tham khảo

10.1097/00041444-199421000-00009

10.1006/geno.1999.5968

10.1017/S0033291700028099

10.1007/s100489900081

Bass MP, 2000, Association analysis of GI candidate genes in autistic disorder, Am J Hum Genet, 67, 349

10.1111/j.1469-7610.1994.tb02300.x

10.1002/ajmg.1497

10.1007/BF02172005

10.1086/320588

10.1002/(SICI)1096-8628(19991215)88:6<609::AID-AJMG7>3.0.CO;2-L

Cook EH, 1997, Autism or atypical autism in maternally but not paternally derived proximal 15q duplication, Am J Hum Genet, 60, 928

10.1086/301832

Cuccaro ML, 1996, Familial aggregation in autism: evidence against X‐linkage as a major genetic etiology, Am J Hum Gen, 59, 1000

10.1097/00004583-199505000-00006

10.1007/BF02179373

10.1352/0895-8017(1997)102<0228:MBICWP>2.0.CO;2

10.1073/pnas.100566997

10.1038/ng0298-168

10.1002/(SICI)1096-8628(19960111)61:2<182::AID-AJMG17>3.0.CO;2-Q

Folstein SE, 1991, Etiology of autism: genetic influences, Pediatrics, 87, 767, 10.1542/peds.87.5.767

10.1093/hmg/7.8.1229

10.1002/(SICI)1096-8628(19960216)67:1<13::AID-AJMG2>3.0.CO;2-T

10.1002/(SICI)1098-2272(1996)13:2<117::AID-GEPI1>3.0.CO;2-5

10.1016/S0014-5793(99)00864-9

10.1034/j.1399-0039.1999.530503.x

10.1016/S0022-3476(99)70052-1

10.1016/S0006-3223(98)00142-5

10.1093/hmg/7.3.571

Jorde LB, 1991, Complex segregation analysis of autism, Am J Hum Genet, 49, 932

10.1086/303011

10.1073/pnas.81.11.3443

Leana‐Cox J, 1994, Molecular cytogenetic analysis of inv dup(15) chromosomes, using probes specific for the Prader‐Willi/Angelman syndrome region: clinical implications, Am J Hum Genet, 54, 748

Lindgren V, 1996, Maternal origin of proximal 15q duplication in autism, Am J Hum Genet, 39, 688

10.1086/321980

10.1007/BF02172145

10.1016/S0074-7742(08)60569-3

10.1002/(SICI)1096-8628(20000207)96:1<43::AID-AJMG9>3.0.CO;2-3

Masser DS, 1998, Chromosome 15q duplication and autism, Am J Hum Genet, 63, 112

10.1007/BF01046216

Menold MM, 2000, SNP analysis of GABAA receptor subunit in autistic disorder, Am J Hum Genet, 67, 339

Ott J, 1999, Analysis of human genetic linkage, 405, 10.56021/9780801861406

10.1002/ajmg.1320460108

Pericak‐Vance MA, 1997, Complete genomic screen in late‐onset familial Alzheimer disease: evidence for a new locus on chromosome 12, JAMA, 278, 1237, 10.1001/jama.1997.03550150041033

10.1093/hmg/8.5.805

Pickles A, 1995, Latent‐class analysis of recurrence risks for complex phenotypes with selection and measurement error: a twin and family history study of autism, Am J Hum Genet, 57, 717

Rimmler JB, 1999, DataTracker: comprehensive software for data quality control protocols in complex disease studies, Am J Hum Genet, 65, 2506

10.1086/302497

10.1086/302528

10.1136/jmg.30.9.756

Santangelo SL, 2000, Confirmatory evidence of linkage for autism to 7q based on combined analysis of three independent data sets, Am J Hum Genet, 67, 80

10.1159/000154222

10.1136/jmg.31.10.798

Sparrow SS, 1984, Vineland adaptive behavior scales

10.1111/j.1469-7610.1989.tb00254.x

10.1016/0887-8994(96)00011-2

10.1111/j.1365-2788.1995.tb00477.x

1998 Wiley‐Liss New York JM Vance JL Haines MA Pericak‐Vance Approaches to gene mapping in complex human diseases. The collection of biological samples 201 211

10.1007/BF01046103

Wang CH, 1998, Molecular analysis of the chromosome 15q11‐13 region in children with autism, Am J Hum Genet, 63, 344

10.1016/S0168-9525(00)89163-5

10.1093/hmg/9.9.1329

Wolpert CM, 2000, Three probands with autistic disorder and isodicentric 15 chromosomes, Neuropsych Genet, 96, 365, 10.1002/1096-8628(20000612)96:3<365::AID-AJMG25>3.0.CO;2-X