Genomewide association study of Aegilops tauschii traits under seedling-stage cadmium stress
Tài liệu tham khảo
Prasad, 1995, Cadmium toxicity and tolerance in vascular plants, Environ. Exp. Bot., 35, 525, 10.1016/0098-8472(95)00024-0
Shukla, 2003, Effect of bioaccumulation of cadmium on biomass productivity, essential trace elements, chlorophyll biosynthesis, and macromolecules of wheat seedlings, Biol. Trace Elem. Res., 92, 257, 10.1385/BTER:92:3:257
Sandalio, 2001, Cadmium-induced changes in the growth and oxidative metabolism of pea plants, J. Exp. Bot., 52, 2115, 10.1093/jexbot/52.364.2115
Liu, 2009, Identification of Chinese cabbage genotypes with low cadmium accumulation for food safety, Environ. Pollut., 157, 1961, 10.1016/j.envpol.2009.01.005
Öncel, 2000, Interactive effects of temperature and heavy metal stress on the growth and some biochemical compounds in wheat seedlings, Environ. Pollut., 107, 315, 10.1016/S0269-7491(99)00177-3
Wang, 2013, The response of maize seedlings to cadmium stress under hydroponic conditions, Russ. J. Plant Physiol., 60, 295, 10.1134/S1021443713020209
Hassan, 2005, Influence of cadmium toxicity on growth and antioxidant enzyme activity in rice cultivars with different grain cadmium accumulation, J. Plant Nutr., 28, 1259, 10.1081/PLN-200063298
Chan, 2004, Differential accumulation of Cd in durum wheat cultivars: uptake and retranslocation as sources of variation, J. Exp. Bot., 55, 2571, 10.1093/jxb/erh255
Verma, 2007, Modeling cadmium accumulation in radish, carrot, spinach and cabbage, Appl. Math. Model., 31, 1652, 10.1016/j.apm.2006.05.008
Grant, 2008, Selection and breeding of plant cultivars to minimize cadmium accumulation, Sci. Total Environ., 390, 301, 10.1016/j.scitotenv.2007.10.038
Jia, 2011, Progress of research on the effects of Cd~(2+) stress on wheat and the response of wheat to Cd~(2+), J. Triticeae Crops, 31, 786
Zhang, 2011, Study and utilization of wild relatives of wheat in xinjiang uygur autonomous regin, Chin. Agric. Sci. Bull., 27, 29
Valkoun, 1990, Triticum×Aegilops hybrids through embryo culture, 152, 10.1007/978-3-662-10933-5_9
Cox, 1992, Resistance to foliar diseases in a collection of Triticum tauschii germ plasm, Plant Dis. (USA), 76, 1061, 10.1094/PD-76-1061
Altshuler, 2008, Genetic mapping in human disease, Science, 322, 881, 10.1126/science.1156409
Stracke, 2009, Association mapping reveals gene action and interactions in the determination of flowering time in barley, Theor. Appl. Genet., 118, 259, 10.1007/s00122-008-0896-y
Thornsberry, 2001, Dwarf8 polymorphisms associate with variation in flowering time, Nat. Genet., 28, 286, 10.1038/90135
Palaisa, 2003, Contrasting effects of selection on sequence diversity and linkage disequilibrium at two phytoene synthase loci, Plant Cell, 15, 1795, 10.1105/tpc.012526
Li, 2009, Development of SNP markers and haplotype analysis of the candidate gene for rhg1, which confers resistance to soybean cyst nematode in soybean, Mol. Breed., 24, 63, 10.1007/s11032-009-9272-0
Singh, 2009, Allelic variation at Psy1-A1 and association with yellow pigment in durum wheat grain, Theor. Appl. Genet., 118, 1539, 10.1007/s00122-009-1001-x
Ehrenreich, 2009, Candidate gene association mapping of Arabidopsis flowering time, Genetics, 183, 325, 10.1534/genetics.109.105189
Zhao, 2007, An Arabidopsis example of association mapping in structured samples, PLoS Genet., 3, e4, 10.1371/journal.pgen.0030004
Hoagland, 1950, The water-culture method for growing plants without soil, Circular, Calif. Agric. Exp. Station., 347
Metwally, 2005, Genotypic variation of the response to cadmium toxicity in Pisum sativum L, J. Exp. Bot., 56, 167
Smith, 1998, Evaluation of simple methods for estimating broad-sense heritability in stands of randomly planted genotypes, Crop Sci., 38, 1125, 10.2135/cropsci1998.0011183X003800050003x
Luo, 2013, A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor, Proc. Natl. Acad. Sci. U. S. A., 110, 7940, 10.1073/pnas.1219082110
Wang, 2013, Aegilops tauschii single nucleotide polymorphisms shed light on the origins of wheat D-genome genetic diversity and pinpoint the geographic origin of hexaploid wheat, New Phytol., 198, 925, 10.1111/nph.12164
Bradbury, 2007, TASSEL: software for association mapping of complex traits in diverse samples, Bioinformatics, 23, 2633, 10.1093/bioinformatics/btm308
Dvorak, 2005, Tempos of gene locus deletions and duplications and their relationship to recombination rate during diploid and polyploid evolution in the Aegilops-Triticum Alliance, Genetics, 171, 323, 10.1534/genetics.105.041632
d'Aloisio, 2010, The protein disulfide isomerase gene family in bread wheat (T. aestivum L.), BMC Plant Biol., 10, e101, 10.1186/1471-2229-10-101
Chalupska, 2008, Acc homoeoloci and the evolution of wheat genomes, Proc. Natl. Acad. Sci. U. S. A., 105, 9691, 10.1073/pnas.0803981105
Ning, 2013, Structure, transcription and post-transcriptional regulation of the bread wheat orthologs of the barley cleistogamy gene Cly1, Theor. Appl. Genet., 126, 1273, 10.1007/s00122-013-2052-6
Shcherban, 2012, Identification of a new Vrn-B1 allele using two near-isogenic wheat lines with difference in heading time, Mol. Breed., 29, 675, 10.1007/s11032-011-9581-y
Shanshan, 2012, Structural genes of wheat and barley 5-methylcytosine DNA glycosylases and their potential applications for human health, Proc. Natl. Acad. Sci. U. S. A., 109, 20543, 10.1073/pnas.1217927109
Rogers, 2000, Altered selectivity in an Arabidopsis metal transporter, Proc. Natl. Acad. Sci. U. S. A., 97, 12356, 10.1073/pnas.210214197
Tsyganov, 2007, A chemically induced new pea (Pisum sativum) mutant SGECdt with increased tolerance to, and accumulation of, cadmium, Ann. Bot., 99, 227, 10.1093/aob/mcl261
Kamínek, 1992, Progress in cytokinin research, Trends Biotechnol., 10, 159, 10.1016/0167-7799(92)90204-9
Nyitrai, 2004, Rejuvenation of ageing bean leaves under the effect of low-dose stressors, Plant Biol., 6, 708, 10.1055/s-2004-830385
Liu, 2010, Variations in cadmium accumulation among Chinese cabbage cultivars and screening for Cd-safe cultivars, J. Hazard. Mater., 173, 737, 10.1016/j.jhazmat.2009.08.147
Yu, 2006, Cadmium accumulation in different rice cultivars and screening for pollution-safe cultivars of rice, Sci. Total Environ., 370, 302, 10.1016/j.scitotenv.2006.06.013
Foy, 1978, The physiology of metal toxicity in plants, Annu. Rev. Plant Physiol., 29, 511, 10.1146/annurev.pp.29.060178.002455
Clemens, 2006, Toxic metal accumulation, responses to exposure and mechanisms of tolerance in plants, Biochimie, 88, 1707, 10.1016/j.biochi.2006.07.003
Faller, 2005, Mechanism of Cd2+ toxicity: Cd2+ inhibits photoactivation of Photosystem II by competitive binding to the essential Ca2+ site, Biochim. Biophys. Acta Bioenerg., 1706, 158, 10.1016/j.bbabio.2004.10.005
Wong, 1982, A comparison of the toxicity of heavy metals, using root elongation of rye grass, Lolium perenne, New Phytol., 91, 255, 10.1111/j.1469-8137.1982.tb03310.x
Baker, 1989, Physiological responses of plants to heavy metals and the quantification of tolerance and toxicity, Chem. Speciat. Bioavailab., 1, 7, 10.1080/09542299.1989.11083102
Wei, 2004, Potential of weed species applied to remediation of soils contaminated with heavy metals, J. Environ. Sci., 16, 868
Sabreen, 2008, Trade-off between cadmium tolerance and relative growth rate in 10 grass species, Environ. Exp. Bot., 63, 327, 10.1016/j.envexpbot.2007.10.019
Arduini, 1994, Cadmium and copper change root growth and morphology of Pinus pinea and Pinus pinaster seedlings, Physiol. Plant., 92, 675, 10.1111/j.1399-3054.1994.tb03039.x
Shi, 2009, Cadmium tolerance and accumulation in eight potential energy crops, Biotechnol. Adv., 27, 555, 10.1016/j.biotechadv.2009.04.006
Sun, 2008, Effects of cadmium and arsenic on growth and metal accumulation of Cd-hyperaccumulator Solanum nigrum L, Bioresour. Technol., 99, 1103, 10.1016/j.biortech.2007.02.035
Wang, 2009, Cadmium in three marine phytoplankton: accumulation, subcellular fate and thiol induction, Aquat. Toxicol., 95, 99, 10.1016/j.aquatox.2009.08.006
Tanyolac, 2007, Changes in photochemical and antioxidant enzyme activities in maize (Zea mays L.) leaves exposed to excess copper, Chemosphere, 67, 89, 10.1016/j.chemosphere.2006.09.052
Li, 2008, Ecophysiological responses of Jussiaea rapens to cadmium exposure, Aquat. Bot., 88, 347, 10.1016/j.aquabot.2008.01.002
Tanhuanpää, 2007, A major gene for grain cadmium accumulation in oat, Genome, 50, 588, 10.1139/G07-036
Courbot, 2007, A major quantitative trait locus for cadmium tolerance in Arabidopsis halleri colocalizes with HMA4, a gene encoding a heavy metal ATPase, Plant Physiol., 144, 1052, 10.1104/pp.106.095133
Kashiwagi, 2009, Evidence for separate translocation pathways in determining cadmium accumulation in grain and aerial plant parts in rice, BMC Plant Biol., 9, e8, 10.1186/1471-2229-9-8
Ueno, 2009, A major quantitative trait locus controlling cadmium translocation in rice (Oryza sativa), New Phytol., 182, 644, 10.1111/j.1469-8137.2009.02784.x
Clarke, 1997, Inheritance of cadmium concentration in five durum wheat crosses, Crop Sci., 37, 1722, 10.2135/cropsci1997.0011183X003700060008x
Scoles, 2009, Chromosomal location of the cadmium uptake gene (Cdu1) in durum wheat, Genome, 52, 741, 10.1139/G09-042
Monneveux, 2000, The utilisation of Triticum and Aegilops species for the improvement of durum wheat, 71
Mguis, 2013, Responses of leaf growth and gas exchanges to salt stress during reproductive stage in wild wheat relative Aegilops geniculata Roth. and wheat (Triticum durum Desf.), Acta Physiol. Plant., 35, 1453, 10.1007/s11738-012-1185-6
van Slageren, 1994, 7
Molnár, 2004, Physiological and morphological responses to water stress in Aegilops biuncialis and Triticum aestivum genotypes with differing tolerance to drought, Funct. Plant Biol., 31, 1149, 10.1071/FP03143
Colmer, 2006, Use of wild relatives to improve salt tolerance in wheat, J. Exp. Bot., 57, 1059, 10.1093/jxb/erj124
Wang, 2014, Large-scale screening for Aegilops tauschii tolerant genotypes to phosphorus deficiency at seedling stage, Euphytica
Dvorak, 1998, The structure of the Aegilops tauschii genepool and the evolution of hexaploid wheat, Theor. Appl. Genet., 97, 657, 10.1007/s001220050942
Petersen, 2006, Phylogenetic relationships of Triticum and Aegilops and evidence for the origin of the A, B, and D genomes of common wheat (Triticum aestivum), Mol. Phylogenet. Evol., 39, 70, 10.1016/j.ympev.2006.01.023
Bordbar, 2011, Phylogeny and genetic diversity of D-genome species of Aegilops and Triticum (Triticeae, Poaceae) from Iran based on microsatellites, ITS, and trnL-F, Plant Syst. Evol., 291, 117, 10.1007/s00606-010-0375-1
Feldman, 1981, The wild gene resources of wheat, Sci. Am., 244, 102, 10.1038/scientificamerican0181-102
Kilian, 2011, Aegilops, 1
Hussien, 1997, Chromosome location of leaf rust resistance gene Lr43 from Aegilops tauschii in common wheat, Crop Sci., 37, 1764, 10.2135/cropsci1997.0011183X003700060016x
Mujeeb-Kazi, 1998, Production and utilization of D genome synthetic hexaploids in wheat improvement