Genome size, cell size, and the evolution of enucleated erythrocytes in attenuate salamanders

AmphibiaWeb, 2007. Information on amphibian biology and conservation, Berkeley, CA, 〈http://amphibiaweb.org/〉 (accessed: March 2, 2007). Brandley, 2005, Partitioned Bayesian analyses, partition choice, and the phylogenetic relationships of scincid lizards, Syst. Biol., 54, 373, 10.1080/10635150590946808 Cavalier-Smith, 1978, Nuclear volume control by nucleoskeletal DNA, selection for cell volume and cell growth rate, and the solution of the DNA C-value paradox, J. Cell Sci., 34, 247, 10.1242/jcs.34.1.247 Chien, 1971, Comparative hemorheology – hematological implications of species differences in blood viscosity, Biorheology, 8, 35, 10.3233/BIR-1971-8106 Chippindale, 2004, Phylogenetic evidence for a major reversal of life-history evolution in plethodontid salamanders, Evolution, 58, 2809, 10.1111/j.0014-3820.2004.tb01632.x Cohen, 1982, The cytomorphic system of anucleate non-mammalian erythrocytes, Protoplasma, 113, 23, 10.1007/BF01283036 Emmel, 1924, Studies on the non-nucleated elements of the blood II: the occurrence and genesis of non-nucleated erythrocytes or erythroplastids in vertebrates other than mammals, Am. J. Anat., 33, 347, 10.1002/aja.1000330207 Felsenstein, 1985, Phylogenies and the comparative method, Am. Nat., 125, 1, 10.1086/284325 Garland, 1992, Procedures for the analysis of comparative data using phylogenetically independent contrasts, Syst. Biol., 41, 18, 10.1093/sysbio/41.1.18 Gatten, 1992, Energetics at rest and during locomotion, 314 Gordon, 1998, Consed: a graphical tool for sequence finishing, Genome Res., 8, 195, 10.1101/gr.8.3.195 Grasso, 1968, Experimental production of totally anaemic newts, Nature, 218, 1274, 10.1038/2181274a0 Gregory, 2000, Nucleotypic effects without nuclei: genome size and erythrocyte size in mammals, Genome, 43, 895, 10.1139/g00-069 Gregory, 2001, The bigger the C-value, the larger the cell: genome size and red blood cell size in vertebrates, Blood Cells Mol. Dis., 27, 830, 10.1006/bcmd.2001.0457 Gregory, 2001, Coincidence, coevolution, or causation? DNA content, cell size, and the C-value enigma, Biol. Rev., 76, 65, 10.1017/S1464793100005595 Gregory, 2002, Genome size and developmental complexity, Genetica, 115, 131, 10.1023/A:1016032400147 Gregory, 2003, Variation across amphibian species in the size of the nuclear genome supports a pluralistic, hierarchical approach to the C-value enigma, Biol. J. Linn. Soc., 79, 329, 10.1046/j.1095-8312.2003.00191.x Gregory, T.R., 2006. Animal Genome Size Database, 〈http://www.genomesize.com〉 (accessed: March 2, 2007). Hanken, 1993, Miniaturization of body size: organismal consequences and evolutionary significance, Ann. Rev. Ecol. Syst., 24, 501, 10.1146/annurev.es.24.110193.002441 Hardie, 2002, From pixels to picograms: a beginners’ guide to genome quantification by Feulgen image analysis densitometry, J. Histochem. Cytochem., 50, 735, 10.1177/002215540205000601 Huelsenbeck, 2001, MRBAYES: Bayesian inference of phylogenetic trees, Bioinformatics, 17, 754, 10.1093/bioinformatics/17.8.754 Hughes, 1999 Jockusch, 1997, An evolutionary correlate of genome size change in plethodontid salamanders, Proc. R. Soc. Lond. B. Biol. Sci., 264, 597, 10.1098/rspb.1997.0085 Jockusch, 2002, Falling apart and merging: diversification of slender salamanders (Plethodontidae: Batrachoseps) in the American West, Biol. J. Linn. Soc. Lond., 76, 361, 10.1111/j.1095-8312.2002.tb01703.x Maddison, W.P., Maddison, D.R., 2006. Mesquite: a modular system for evolutionary analysis, version 1.12, 〈http://mesquiteproject.org〉 (accessed: March 2, 2007). Marlow, 1979, A new salamander, genus Batrachoseps, from the Inyo Mountains of California, with a discussion of relationships in the genus, Contrib. Sci. (Los Angeles), 308, 1 Martins, 2002, Adaptive constraints and the phylogenetic comparative method: a computer simulation test, Evolution, 56, 1, 10.1111/j.0014-3820.2002.tb00844.x Midford, P.E., Garland Jr., T., Maddison, W.P., 2002. PDAP: PDTREE: a translation of the PDTREE application of Garland et al.'s Phenotypic Diversity Analysis Programs. Monnickendam, 1973, The relationship between cell sizes, respiration rates, and survival of amphibian tissues in long-term organ cultures, Comp. Biochem. Physiol. Ser. A, 44, 871, 10.1016/0300-9629(73)90150-3 Mueller, 2000, Who needs a nucleus? Red blood cells in the genus Batrachoseps, Am. Zool., 40, 1142 Mueller, 2004, Morphological homoplasy, life history evolution, and historical biogeography of plethodontid salamanders inferred from complete mitochondrial genomes, Proc. Natl. Acad. Sci. USA, 101, 13820, 10.1073/pnas.0405785101 Nash, 1993, Comparative rheology of human and trout red blood cells, J. Exp. Biol., 174, 109, 10.1242/jeb.174.1.109 Nylander, 2004, Bayesian phylogenetic analysis of combined data, Syst. Biol., 53, 47, 10.1080/10635150490264699 Ohta, 1992, Animal species differences in erythrocyte aggregability, Am. J. Physiol. Heart. Circ. Physiol., 262, H1009, 10.1152/ajpheart.1992.262.4.H1009 Olmo, 1983, Nucleotype and cell size in vertebrates: a review, Basic Appl. Histochem., 27, 227 Olmo, 1975, Evolution of the genome and cell sizes in salamanders, Experientia, 31, 804, 10.1007/BF01938475 Posada, 1998, MODELTEST: testing the model of DNA substitution, Bioinformatics, 14, 817, 10.1093/bioinformatics/14.9.817 Presnell, 1997 Purvis, 1995, Comparative analysis by independent contrasts (CAIC): an Apple Macintosh application for analysing comparative data, Comp. Appl. Biosci., 11, 247 Roth, 1994, Cell size predicts morphological complexity in the brains of frogs and salamanders, Proc. Natl. Acad. Sci. USA, 91, 4796, 10.1073/pnas.91.11.4796 Roth, 1997, Genome size, secondary simplification, and the evolution of the brain in salamanders, Brain Behav. Evol., 50, 50, 10.1159/000113321 Sessions, 1991, Evolutionary cytogenetics of bolitoglossine salamanders (family Plethodontidae), 89 Sessions, 1987, Developmental correlates of genome size in plethodontid salamanders and their implications for genome evolution, Evolution, 41, 1239, 10.2307/2409090 Stebbins, 1949, The systematic status of Plethopsis with a discussion of speciation in the genus Batrachoseps, Copeia, 1949, 116, 10.2307/1438486 Swofford, 1998 Szarski, 1983, Cell size and the concept of wasteful and frugal evolutionary strategies, J. Theor. Biol., 105, 201, 10.1016/S0022-5193(83)80002-2 Thompson, 1994, CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Res., 22, 4673, 10.1093/nar/22.22.4673 Villolobos, 1988, Enucleated erythrocytes in plethodontid salamanders, Herpetologica, 44, 243 Vinogradov, 1998, Genome size and GC-percent in vertebrates as determined by flow cytometry: the triangular relationship, Cytometry, 31, 100, 10.1002/(SICI)1097-0320(19980201)31:2<100::AID-CYTO5>3.0.CO;2-Q Wake, 1989, Phylogenetic implications of ontogenetic data, 369 Waltari, 2002, Evolutionary dynamics of intron size, genome size, and physiological correlates in archosaurs, Am. Nat., 160, 539, 10.1086/342079 Wyman, 2004, Automatic annotation of organellar genomes with DOGMA, Bioinformatics, 20, 3252, 10.1093/bioinformatics/bth352 Yanev, 1980, Biogeography and distribution of three parapatric salamander species in coastal and borderland California