Genetic diversity of the entomopathogenic fungus Cordyceps tenuipes in forests and butterfly gardens in Quindío, Colombia
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Altschul, 1997, Gapped BLAST and PSI-BLAST: a new generation of protein database search programs, Nucleic Acids Res., 25, 3389, 10.1093/nar/25.17.3389
Andrade, 2002, Diversidad de mariposas (Lepidoptera: Rhopalocera) en la parte alta de al cuenca del Río El Roble (Quindío-Colombia), Caldasia, 24, 393
Andrade, 2007, 248
Assefa, 2015, Population genomic structure and adaptation in the zoonotic malaria parasite Plasmodium knowlesi, Proc. Natl. Acad. Sci. U. S. A, 112, 13027, 10.1073/pnas.1509534112
Bidochka, 2002, Genetic groups of the insect-pathogenic fungus Beauveria bassiana are associated with habitat and thermal growth preferences, Arch. Microbiol., 178, 531, 10.1007/s00203-002-0490-7
Biek, 2007, A high-resolution genetic signature of demographic and spatial expansion in epizootic rabies virus, Proc. Natl. Acad. Sci. U. S. A, 104, 7993, 10.1073/pnas.0700741104
Boppré, 2012, The butterfly house industry: conservation risks and education opportunities, Conserv. Soc., 10, 285, 10.4103/0972-4923.101831
Castelloe, 1994, Root probabilities for intraspecific gene trees under neutral coalescent theory, Mol. Phylogenet. Evol., 3, 102, 10.1006/mpev.1994.1013
Castlebury, 2004, Multigene phylogeny reveals new lineage for Stachybotrys chartarum, the indoor air fungus, Mycol. Res., 108, 864, 10.1017/S0953756204000607
Chen, 1999, Genetic diversity and taxonomic implication of Cordyceps sinensis as revealed by RAPD markers, Biochem. Genet., 37, 201, 10.1023/A:1018738706123
Chen, 2004, Genetic variation of Cordyceps sinensis, a fruit-body-producing entomopathogenic species from different geographical regions in China, FEMS Microbiol. Lett., 230, 153, 10.1016/S0378-1097(03)00889-9
Clement, 2000, TCS: a computer program to estimate gene genealogies, Mol. Ecol., 9, 1657, 10.1046/j.1365-294x.2000.01020.x
Constantino, 2006, 35
Frey, 1999, Bacterial and fungal abundance and biomass in conventional and no-tillage agroecosystems along two climatic gradients, Soil Biol. Biochem., 31, 573, 10.1016/S0038-0717(98)00161-8
Gardes, 1993, ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts, Mol. Ecol., 2, 113, 10.1111/j.1365-294X.1993.tb00005.x
Grünwald, 2011, Evolution and population genetics of exotic and Re-Emerging pathogens: novel tools and approaches, Annu. Rev. Phytopathol., 49, 249, 10.1146/annurev-phyto-072910-095246
Hamilton, 2009
Hartl, 1997
Hawksworth, 2004, Fungal diversity and its implications for genetic resource collections, Stud. Mycol., 50, 9
Hong, 2007, Chemical components of Paecilomyces tenuipes (Peck) Samson, Mycobiology, 35, 215, 10.4489/MYCO.2007.35.4.215
Johnson, 2009, Systematics and evolution of the genus Torrubiella (Hypocreales, Ascomycota), Mycol. Res., 113, 279, 10.1016/j.mycres.2008.09.008
Kanauchi, 1999, Light-induced fruit body formation of an entomogenous fungus. Paecilomyces tenuipes, Mycoscience, 40, 349, 10.1007/BF02463879
Katoh, 2002, MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform, Nucleic Acids Res., 30, 3059, 10.1093/nar/gkf436
Kepler, 2017, A phylogenetic-based nomenclature for Cordycipitaceae (Hypocreales), IMA Fungus, 8, 335, 10.5598/imafungus.2017.08.02.08
Kepler, 2015, Community composition and population genetics of insect pathogenic fungi in the genus Metarhizium from soils of a long-term agricultural research system, Environ. Microbiol., 17, 2791, 10.1111/1462-2920.12778
Kinjo, 2001, Morphological and phylogenetic studies on Cordyceps sinensis distributed in southwestern China, Mycoscience, 42, 567, 10.1007/BF02460956
Küppers, 1979, 165
Liang, 2008, Genetic diversity and structure of Cordyceps sinensis populations from extensive geographical regions in China as revealed by inter-simple sequence repeat markers, J. Microbiol., 46, 549
Librado, 2009, DnaSP v5: a software for comprehensive analysis of DNA polymorphism data, Bioinformatics, 25, 1451, 10.1093/bioinformatics/btp187
LuangsaArd, 2005, On the relationships of Paecilomyces sect. Isarioidea species, Mycol. Res., 109, 581, 10.1017/S0953756205002741
McDonald, 2002, The population genetics of plant pathogens and breeding strategies for durable resistance, Euphytica, 124, 163, 10.1023/A:1015678432355
Meyling, 2007, Ecology of the entomopathogenic fungi Beauveria bassiana and Metarhizium anisopliae in temperate agroecosystems: potential for conservation biological control, Biol. Contr., 43, 145, 10.1016/j.biocontrol.2007.07.007
Meyling, 2009, Community composition, host range and genetic structure of the fungal entomopathogen Beauveria in adjoining agricultural and seminatural habitats, Mol. Ecol., 18, 1282, 10.1111/j.1365-294X.2009.04095.x
PearceKelly, 1994, Invertebrate propagation and re-establishment programmes: the conservation and education potential for zoos and related institutions, Creative Conservation, 329, 10.1007/978-94-011-0721-1_17
PearceKelly, 2007, 57
Rambaut, 2009, FigTree, a graphical viewer of phylogenetic trees, PLoS Comput. Biol., 5, 9
Rampersad, 2013, Genetic structure and demographic history of Colletotrichum gloeosporioides sensu lato and C. truncatum isolates from Trinidad and Mexico, BMC Evol. Biol., 13, 130, 10.1186/1471-2148-13-130
Rehner, 2005, A Beauveria phylogeny inferred from nuclear ITS and EF1-α sequences: evidence for cryptic diversification and links to Cordyceps teleomorphs, Mycologia, 97, 84
Rivers, 1991, The control of diseases in insect cultures, Int. Zoo Yearbk., 30, 131, 10.1111/j.1748-1090.1991.tb03475.x
Rozas, 2003, DnaSP, DNA polymorphism analyses by the coalescent and other methods, Bioinformatics, 19, 2496, 10.1093/bioinformatics/btg359
Samson, 1974, Paecilomyces and some allied Hyphomycetes, Stud. Mycol., 6, 1
Sanjuan, 2014, Entomopathogens of Amazonian stick insects and locusts are members of the Beauveria species complex (Cordyceps sensu stricto), Mycologia, 106, 260, 10.3852/13-020
Sanjuan, 2015, 159
Stamatakis, 2006, RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models, Bioinformatics, 22, 2688, 10.1093/bioinformatics/btl446
Sung, 2007, Phylogenetic classification of Cordyceps and the clavicipitaceous fungi, Stud. Mycol., 57, 5, 10.3114/sim.2007.57.01
Tajima, 1989, Statistical method for testing the neutral mutation hypothesis by DNA polymorphism, Genetics, 123, 585, 10.1093/genetics/123.3.585
Tian, 2010, Molecular phylogeny of the entomopathogenic fungi of the genus Cordyceps (Ascomycota: clavicipitaceae) and its evolutionary implications, J. Systemat. Evol., 48, 435, 10.1111/j.1759-6831.2010.00100.x
Vega-Aquino, 2010, Activity of oil-formulated conidia of the fungal entomopathogens Nomuraea rileyi and Isaria tenuipes against lepidopterous larvae, J. Invertebr. Pathol., 103, 145, 10.1016/j.jip.2009.12.002
Wang, 2008, Genetic variation of Cordyceps militaris and its allies based on phylogenetic analysis of rDNA ITS sequence data, Fungal Divers., 31, 147
Zhang, 2009, Genetic diversity of Ophiocordyceps sinensis, a medicinal fungus endemic to the Tibetan Plateau: implications for its evolution and conservation, BMC Evol. Biol., 9, 290, 10.1186/1471-2148-9-290
Zhang, 2014, Phylogeography and evolution of a fungal–insect association on the Tibetan Plateau, Mol. Ecol., 23, 5337, 10.1111/mec.12940