Gene expression profiles during heat acclimation in Arabidopsis thaliana suspension-culture cells
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Adamska I, Kloppstech K (1991) Evidence for the localization of the nuclear-coded 22-kDa heat shock protein in a subfraction of thylakoid membranes. Eur J Biochem 198:375–381
Arnon DI (1949) Copper enzymes in isolated chloroplasts: polyphenoloxidase in Beta vulgaris. Plant Physiol 24:1–15
Asamizu E, Nakamura Y, Sato S, Tabata S (2000) A large scale analysis of cDNA in Arabidopsis thaliana: generation of 12,028 non-redundant expressed sequence tags from normalized and size-selected cDNA libraries. DNA Res 7:175–180
Axelos M, Curie C, Mazzolini L, Bardet C, Lescure B (1992) A protocol for transient gene expression in Arabidopsis thaliana protoplasts isolated from cell suspension cultures. Plant Physiol Biochem 30:123–128
Bailey TL, Elkan C (1995) The value of prior knowledge in discovering motifs with MEME. Proc Int Conf Intell Syst Mol Biol 3:21–29
Behl RK, Heise KP, Moawad AM (1996) High temperature tolerance in relation to changes in lipids in mutant wheat. Tropenlandwirt 97:131–135
Burke JJ (2001) Identification of genetic diversity and mutations in higher plant acquired thermotolerance. Physiol Plant 112:167–170
Burke JJ, O’Mahony PJ, Oliver MJ (2000) Isolation of Arabidopsis thaliana mutants lacking components of acquired thermotolerance. Plant Physiol 123:575–588
Busch W, Wunderlich M, Schoffl F (2005) Identification of novel heat shock factor-dependent genes and biochemical pathways in Arabidopsis thaliana. Plant J 41:1–14
Chirgwin JM, Przybyla AE, MacDonald RJ, Rutter WJ (1979) Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. Biochemistry 18:5294–5299
Clarke SM, Mur LA, Wood JE, Scott IM (2004) Salicylic acid dependent signaling promotes basal thermotolerance but is not essential for acquired thermotolerance in Arabidopsis thaliana. Plant J 38:432–447
Criddle RS, Hopkin MS, McArthur ED, Hansen LD (1994) Plant distribution and the temperature-coefficient of metabolism. Plant Cell Environ 17:233–243
Dat JF, Foyer CH, Scott IM (1998) Changes in salicylic acid and antioxidants during induced thermotolerance in mustard seedlings. Plant Physiol 118:1455–1461
Donaldson RP, Luster DG (1991) Multiple forms of plant cytochromes P450. Plant Physiol 96:669–674
Falcone DL, Ogas JP, Somerville CR (2004) Regulation of membrane fatty acid composition by temperature in mutants of Arabidopsis with alterations in membrane lipid composition. BMC Plant Biol 4:17
Finkelstein D, Ewing R, Gollub J, Sterky F, Cherry JM, Somerville S (2002) Microarray data quality analysis: lessons from the AFGC project. Arabidopsis Functional Genomics Consortium. Plant Mol Biol 48:119–131
Gilmour SJ, Fowler SG, Thomashow MF (2004) Arabidopsis transcriptional activators CBF1, CBF2, and CBF3 have matching functional activities. Plant Mol Biol 54:767–781
Goldsborough AP, Albrecht H, Stratford R (1993) Salicylic acid-inducible binding of a tobacco nuclear protein to a 10 bp sequence which is highly conserved amongst stress-inducible genes. Plant J 3:563–571
Gong M, Li X-J, Dai X, Tian M, Li Z-G (1997) Involvement of calcium and calmodulin in the acquisition of HS induced thermotolerance in maize seedlings. J Plant Physiol 150:615–621
Goyer A, Haslekas C, Miginiac-Maslow M, Klein U, Le Marechal P, Jacquot JP, Decottignies P (2002) Isolation and characterization of a thioredoxin-dependent peroxidase from Chlamydomonas reinhardtii. Eur J Biochem 269:272–282
Hauser EJP, Morrison JH (1964) The cytochemical reduction of nitro blue tetrazolium as an index of pollen viability. Am J Bot 51:748–752
Higo K, Ugawa Y, Iwamoto M, Korenaga T (1999) Plant cis-acting regulatory DNA elements (PLACE) database: 1999. Nucleic Acids Res 27:297–300
Hong SW, Vierling E (2000) Mutants of Arabidopsis thaliana defective in the acquisition of tolerance to high temperature stress. Proc Natl Acad Sci USA 97:4392–4397
Howarth CJ (1991) Molecular responses of plants to an increased incidence of thermotolerance. Plant Cell Environ 14:831–841
Howarth CJ, Ougham HJ (1993) Gene expression under temperature stress. New Phytol 125:1–26
Huang B, Liu X, Fry JD (1998) Shoot physiological responses of two bentgrass cultivars to high temperature and poor soil aeration. Crop Sci 38:1219–1225
Hugly S, Kunst L, Browse J, Somerville C (1989) Enhanced thermal tolerance of photosynthesis and altered chloroplast ultrastructure in a mutant of Arabidopsis deficient in lipid saturation. Plant Physiol 90:1134–1142
Jouanneau J-P, Péaud-Lenoёl C (1967) Croissance et synthèse des protéines de suspensions cellulaires de tabac sensibles á la kinétine. Physiol Plant 20:834–850
Kim SY, Hong CB, Lee I (2001) Heat shock stress causes stage-specific male sterility in Arabidopsis thaliana. J Plant Res 114:301–307
Kunst L, Browse J, Somerville C (1989) Enhanced thermal tolerance in a mutant of Arabidopsis deficient in palmitic acid unsaturation. Plant Physiol 91:401–408
Larkindale J, Huang B (2004) Changes of lipid composition and saturation level in leaves and roots for heat-stressed and heat-acclimated creeping bentgrass (Agrostis stolonifera). Environ Exp Bot 51:57–67
Lee JH, Hübel A, Schöffl F (1995) Derepression of the activity of genetically engineered heat shock factor causes constitutive synthesis of heat shock proteins and increased thermotolerance in transgenic Arabidopsis. Plant J 8:603–612
Levine A, Tenhaken R, Dixon R, Lamb C (1994) H2O2 from the oxidative burst orchestrates the plant hypersensitive disease resistance response. Cell 79:583–593
Lindquist S (1980) Varying patterns of protein synthesis in Drosophila during heat shock: implications for regulation. Dev Biol 77:463–479
Liu X, Huang B (2000) Heat stress injury in relation to membrane lipid peroxidation in creeping bentgrass. Crop Sci 40:503–510
Liu Q, Kasuga M, Sakuma Y, Abe H, Miura S, Yamaguchi-Shinozaki K, Shinozaki K (1998) Two transcription factors, DREB1 and DREB2, with an EREBP/AP2 DNA binding domain separate two cellular signal transduction pathways in drought- and low-temperature-responsive gene expression, respectively, in Arabidopsis. Plant Cell 10:1391–1406
Maestri E, Klueva N, Perrotta C, Gulli M, Nguyen HT, Marmiroli N (2002) Molecular genetics of heat tolerance and heat shock proteins in cereals. Plant Mol Biol 48:667–681
Malik MK, Slovin JP, Hwang CH, Zimmerman JL (1999) Modified expression of a carrot small heat shock protein gene, Hsp17.7, results in increased or decreased thermotolerance. Plant J 20:89–99
Maruyama K, Sakuma Y, Kasuga M, Ito Y, Seki M, Goda H, Shimada Y, Yoshida S, Shinozaki K, Yamaguchi-Shinozaki K (2004) Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems. Plant J 38:982–993
McCabe PF, Leaver CJ (2000) Programmed cell death in cell cultures. Plant Mol Biol 44:359–368
McCabe PF, Levine A, Meijer PJ, Tapon NA, Pennell RI (1997) A programmed cell death pathway activated in carrot cells cultured at low cell density. Plant J 12:267–280
Nakashima K, Shinwari ZK, Sakuma Y, Seki M, Miura S, Shinozaki K, Yamaguchi-Shinozaki K (2000) Organization and expression of two Arabidopsis DREB2 genes encoding DRE-binding proteins involved in dehydration- and high-salinity-responsive gene expression. Plant Mol Biol 42:657–665
Nover L, Scharf KD, Neumann D (1983) Formation of cytoplasmic heat shock granules in tomato cell cultures and leaves. Mol Cell Biol 3:1648–1655
Ong CK, Baker NR (1985) Temperature and leaf growth. In: Baker NR, Davies WJ, Ong CK (eds) Control of leaf growth. Seminar series, Society for Experimental Biology, No. 27. Cambridge University Press, Cambridge, pp 175–200
Prestridge DS (1991) SIGNAL SCAN: a computer program that scans DNA sequences for eukaryotic transcriptional elements. Comput Appl Biosci 7:203–206
Queitsch C, Hong SW, Vierling E, Lindquist S (2000) Heat shock protein 101 plays a crucial role in thermotolerance in Arabidopsis. Plant Cell 12:479–492
Restivo FM, Tassi F, Maestri E, Lorenzoni C, Puglisi PP, Marmiroli N (1986) Identification of chloroplast associated heat shock proteins in Nicotiana plumbaginifolia protoplasts. Curr Genet 11:145–149
Richmond T, Somerville S (2000) Chasing the dream: plant EST microarrays. Curr Opin Plant Biol 3:108–116
Riviere JL, Cabbane F (1987) Animal and plant cytochrome P450 systems. Biochemie 69:743–752
Rizhsky L, Liang H, Shuman J, Shulaev V, Davletova S, Mittler R (2004) When defense pathway collide. The response of Arabidopsis to a combination of drought and heat stress. Plant Physiol 134:1683–1696
Robertson AJ, Ishikawa M, Gusta LV, MacKenzie SL (1994) Abscisic acid-induced heat tolerance in Bromus inermis Leyss cell-suspension cultures. Heat-stable, abscisic acid-responsive polypeptides in combination with sucrose confer enhanced thermostability. Plant Physiol 105:181–190
Rombauts S, Florquin K, Lescot M, Marchal K, Rouze P, Van de Peer Y (2003) Computational approaches to identify promoters and cis-regulatory elements in plant genomes. Plant Physiol 132:1162–1176
Sakuma Y, Liu Q, Dubouzet JG, Abe H, Shinozaki K, Yamaguchi-Shinozaki K (2002) DNA-binding specificity of the ERF/AP2 domain of Arabidopsis DREBs, transcription factors involved in dehydration- and cold-inducible gene expression. Biochem Biophys Res Commun 290:998–1009
Schena M, Shalon D, Davis RW, Brown PO (1995) Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science 270:467–470
Seki M, Narusaka M, Abe H, Kasuga M, Yamaguchi-Shinozaki K, Carninci P, Hayashizaki Y, Shinozaki K (2001) Monitoring the expression pattern of 1300 Arabidopsis genes under drought and cold stresses by using a full-length cDNA microarray. Plant Cell 13:61–67
Sharkey TD, Chen XY, Yeh S (2001) Isoprene increases thermotolerance of fosmidomycin-fed leaves. Plant Physiol 125:2001–2006
Swidzinski JA, Sweetlove LJ, Leaver CJ (2002) A custom microarray analysis of gene expression during programmed cell death in Arabidopsis thaliana. Plant J 30:431–446
Takahashi T, Komeda Y (1989) Characterization of two genes encoding small heat-shock proteins in Arabidopsis thaliana. Mol Gen Genet 219:365–372
Takahashi T, Naito S, Komeda Y (1992) Isolation and analysis of the expression of two genes for the 81-kilodalton heat shock proteins from Arabidopsis. Plant Physiol 99:383–397
Thomashow MF (2001) So what’s new in the field of plant cold acclimation? Lots! Plant Physiol 125:89–93
Vallelian-Bindschedler L, Schweizer P, Mosinger E, Metraux J-P (1998) Heat induced resistance in barley to powdery mildew (Blumeria graminis f. sp. Hordei) is associated with a bust of AOS. Physiol Mol Plant Pathol 52:185–199
Vierling E (1991) The roles of heat shock protein in plants. Annu Rev Plant Physiol Plant Mol Biol 42:579–620
Wang W, Vinocur B, Altman A (2003) Plant responses to drought, salinity and extreme temperatures: towards genetic engineering for stress tolerance. Planta 218:1–14
Yang KA, Lim CJ, Hong JK, Jin ZL, Hong JC, Yun D-J, Chung WS, Lee SY, Cho MJ, Lim CO (2005) Identification of Chinese cabbage genes up-regulated by prolonged cold by using microarray analysis. Plant Sci 168:959–966