Gene expression patterns and dynamics of the colonization of common bean (Phaseolus vulgaris L.) by highly virulent and weakly virulent strains of Fusarium oxysporum

Alves-Santos, 2002a, Pathogenicity and race characterization of Fusarium oxysporum f. sp., phaseoli isolates from Spain and Greece. Plant Pathol., 51, 605, 10.1046/j.1365-3059.2002.00745.x

Alves-Santos, 2002b, A DNA-based procedure for in planta detection of Fusarium oxysporum f. sp., phaseoli., 92, 237, 10.1094/PHYTO.2002.92.3.237

Alves-Santos, 1999, Genetic diversity of Fusarium oxysporum strains from common bean fields in Spain., Appl. Environ. Microbiol., 65, 3335, 10.1128/AEM.65.8.3335-3340.1999

Armstrong, 1975, Reflections on the wilt fusaria., Annu. Rev. Phytopathol., 13, 95, 10.1146/annurev.py.13.090175.000523

Berrocal-Lobo, 2008, Arabidopsis defense response againstFusarium oxysporum., Trends Plant Sci., 13, 145, 10.1016/j.tplants.2007.12.004

Bishop, 1983, An ultrastructural study of root invasion in three vascular wilt diseases., Physiol. Plant Pathol., 22, 15, 10.1016/S0048-4059(83)81034-0

Booth, 1971, The Genus Fusarium.

Bustin, 2000, Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays., J. Mol. Endocrinol., 25, 169, 10.1677/jme.0.0250169

Caracuel, 2003, The pH signalling transcription factor PacC controls virulence in the plant pathogen Fusarium oxysporum., Mol. Microbiol., 48, 765, 10.1046/j.1365-2958.2003.03465.x

Czymmek, 2007, In vivo time-lapse documentation using confocal and multi-photon microscopy reveals the mechanisms of invasion into the Arabidopsis root vascular system by Fusarium oxysporum., Fungal Genet. Biol., 44, 1011, 10.1016/j.fgb.2007.01.012

de Vega-Bartol, 2011, New Virulence Groups in Fusarium oxysporum f. sp.phaseoli: the expression of the gene coding for the transcription factor ftf1 correlates with virulence., Phytopathology, 101, 470, 10.1094/PHYTO-09-10-0252

Divon, 2006, The global nitrogen regulator, FNR1 regulates fungal nutrition-genes and fitness during Fusarium oxysporum pathogenesis., Mol. Plant Pathol., 7, 485, 10.1111/j.1364-3703.2006.00354.x

Durrant, 2004, Systemic acquired resistance., Annu. Rev. Phytopathol., 42, 185, 10.1146/annurev.phyto.42.040803.140421

Frandsen, 2008, Efficient four fragment cloning for the construction of vectors for targeted gene replacement in filamentous fungi., BMC Mol. Biol., 9, 10.1186/1471-2199-9-70

Fujimoto, 2000, Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression., Plant Cell, 12, 393, 10.1105/tpc.12.3.393

García-Sánchez, 2010, fost12 the Fusarium oxysporum homolog of the transcription factor Ste12 is upregulated during plant infection and required for virulence., Fungal Genet. Biol., 47, 216, 10.1016/j.fgb.2009.11.006

Gawehns, 2014, The Fusarium oxysporum effector Six6 contributes to virulence and suppresses I-2-mediated cell death., Mol. Plant Microbe Interact., 27, 336, 10.1094/MPMI-11-13-0330-R

Gómez-Lama Cabanás, 2012, Molecular analysis of Spanish populations of Fusarium oxysporum f. sp.dianthi demonstrates a high genetic diversity and identifies virulence groups in races 1 and 2 of the pathogen., Eur. J. Plant Pathol., 132, 561, 10.1007/s10658-011-9901-4

Imazaki, 2007, Fow2 a Zn(II)2Cys6-type transcription regulator, controls plant infection of the vascular wilt fungus Fusarium oxysporum., Mol. Microbiol., 63, 737, 10.1111/j.1365-2958.2006.05554.x

Jiménez, 2007, A chickpea Kunitz trypsin inhibitor is located in cell wall of elongating seedling organs and vascular tissue., Planta, 226, 45, 10.1007/s00425-006-0465-z

Jiménez-Fernández, 2013, Quantitative and microscopic assessment of compatible and incompatible interactions between chickpea cultivars and Fusarium oxysporum f. sp. ciceris Races., PLoS ONE, 8, 10.1371/journal.pone.0061360

Jonkers, 2013, EBR1 genomic expansion and its role in virulence of Fusarium species., Environ. Microbiol., 16, 1982, 10.1111/1462-2920.12331

Lagopodi, 2002, Novel aspects of tomato root colonization and infection by Fusarium oxysporum f., sp. radicis-lycopersici revealed by confocal laser scanning microscopic analysis using the green fluorescent protein as a marker. Mol. Plant Microbe Interact., 15, 172, 10.1094/MPMI.2002.15.2.172

Li, 2011, The use of GFP-transformed isolates to study infection of banana with Fusarium oxysporum f. sp.cubense race 4., Eur. J. Plant Pathol., 131, 327, 10.1007/s10658-011-9811-5

Lorenzo, 2002, ETHYLENE RESPONSE FACTOR 1 integrates signals from ethylene and jasmonate pathways in plant defense., Plant Cell, 15, 165, 10.1105/tpc.007468

Lü, 2013, Colonization of Fusarium wilt-resistant and susceptible watermelon roots by a green-fluorescent-protein-tagged isolate of Fusarium oxysporum f.sp., niveum. J. Phytopathol., 162, 228, 10.1111/jph.12174

Ma, 2010, Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium., Nature, 464, 367, 10.1038/nature08850

Maor, 1998, Use of green fluorescent protein (GFP) for studying development and fungal-plant interaction in Cochliobolus heterostrophus., Mycol. Res., 102, 491, 10.1017/S0953756297005789

Michielse, 2009, Pathogen profile update: Fusarium oxysporum., Mol. Plant Pathol., 10, 311, 10.1111/j.1364-3703.2009.00538.x

Mullins, 2001, an efficient tool for insertional mutagenesis and gene transfer., Phytopathology, 91, 173, 10.1094/PHYTO.2001.91.2.173

Nahalkova, 2008, Tomato root colonization by fluorescent-tagged pathogenic and protective strains of Fusarium oxysporum in hydroponic culture differs from root colonization in soil., FEMS Microbiol. Lett., 286, 152, 10.1111/j.1574-6968.2008.01241.x

Nelson, 1981, Life cycle and epidemiology of Fusarium oxysporum, Fungal wilt Diseases of Plants, 51, 10.1016/B978-0-12-464450-2.50008-5

Nucci, 2007, Fusarium infections in inmunocompromised patients., Clin. Microbiol. Rev., 20, 695, 10.1128/CMR.00014-07

O’Donnell, 2009, A two-locus DNA sequence database for typing plant and human pathogens within the Fusarium oxysporum species complex., Fungal Genet. Biol., 46, 936, 10.1016/j.fgb.2009.08.006

Pardo, 2014, The Aspergillus nidulans Zn(II)2Cys6 transcription factor AN5673/RhaR mediates L-rhamnose utilization and the production of alpha-L-rhamnosidases., Microb. Cell Fact., 13

Peñalva, 2008, Ambient pH gene regulation in fungi: making connections., Trends Microbiol., 16, 291, 10.1016/j.tim.2008.03.006

Pfaffl, 2002, Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR., Nucleic Acids Res., 30, 10.1093/nar/30.9.e36

Ramírez-Suero, 2010, A study on the susceptibility of the model legume plant Medicago truncatula to the soil-borne pathogen Fusarium oxysporum., Eur. J. Plant Pathol., 126, 517, 10.1007/s10658-009-9560-x

Ramos, 2005, Análisis de factores de patogenicidad y virulencia en el hongo Fusarium oxysporum f. sp. phaseoli.

Ramos, 2007, The gene coding for a new transcription factor (ftf1) of Fusarium oxysporum is only expressed during infection of common bean., Fungal Genet. Biol., 44, 864, 10.1016/j.fgb.2007.03.003

Rep, 2004, A small, cysteine-rich protein secreted by Fusarium oxysporum during colonization of xylem vessels is required for I-3-mediated resistance in tomato., Mol. Microbiol., 53, 1373, 10.1111/j.1365-2958.2004.04177.x

Sarrocco, 2007, Use of Fusarium oxysporum f. sp., dianthi transformed with marker genes to follow colonization of carnation roots. J. Plant Pathol., 89, 47

Sukno, 2008, Root infection and systemic colonization of maize by Colletotrichum graminicola., Appl. Environ. Microbiol., 74, 823, 10.1128/AEM.01165-07

Tamayo-Ramos, 2012, L-Rhamnose induction of Aspergillus nidulans alpha-L-rhamnosidase genes is glucose repressed via a CreA-independent mechanism acting at the level of inducer uptake., Microb. Cell Fact., 11, 10.1186/1475-2859-11-26

van der Does, 2008, Expression of effector gene SIX1 of Fusarium oxysporum requires living plant cells., Fungal Genet. Biol., 45, 1257, 10.1016/j.fgb.2008.06.002

Yadeta, 2013, The xylem as battleground for plant hosts and vascular wilt pathogens., Front. Plant Sci., 4, 10.3389/fpls.2013.00097

Zhao, 2011, EBR1 a novel Zn2Cys6 transcription factor, affects virulence and apical dominance of the hyphal tip in Fusarium graminearum., Mol. Plant Microb. Interact., 24, 1407, 10.1094/MPMI-06-11-0158

Zvirin, 2010, Differential colonization and defence responses of resistant and susceptible melon lines infected by Fusarium oxysporum race 1â‹…2., Plant Pathol., 59, 576, 10.1111/j.1365-3059.2009.02225.x