Gene expression changes reveal patterns of aging in the rat digestive tract
Tài liệu tham khảo
Ahuja, 1998, Aging and DNA methylation in colorectal mucosa and cancer, Cancer Res., 58, 5489
Al-Regaiey, 2005, Long-lived growth hormone receptor knockout mice: interaction of reduced insulin-like growth factor i/insulin signaling and caloric restriction, Endocrinology, 146, 851, 10.1210/en.2004-1120
Alon, 1999, Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays, Proc. Natl. Acad. Sci. U.S.A., 96, 6745, 10.1073/pnas.96.12.6745
Aviv, 2004, Telomeres and human aging: facts and fibs, Sci. Aging Knowl. Environ., 51, pe43, 10.1126/sageke.2004.51.pe43
Ball, 1976, Changes in ornithine decarboxylase activity in rat intestines during aging, Cancer Res., 36, 3312
Bariol, 2003, The relationship between hypomethylation and CpG island methylation in colorectal neoplasia, Am. J. Pathol., 162, 1361, 10.1016/S0002-9440(10)63932-6
Bartke, 2003, Can growth hormone (GH) accelerate aging? Evidence from GH-transgenic mice, Neuroendocrinology, 78, 210, 10.1159/000073704
Bates, 2002, Novel genes and functional relationships in the adult mouse gastrointestinal tract identified by microarray analysis, Gastroenterology, 122, 1467, 10.1053/gast.2002.32975
Baylin, 1998, Alterations in DNA methylation: a fundamental aspect of neoplasia, Adv. Cancer Res., 72, 141, 10.1016/S0065-230X(08)60702-2
Beaumont, 1985, Aspects of nutrition in the elderly, Clin. Gastroenterol., 14, 811
Beckman, 1998, The free radical theory of aging matures, Physiol. Rev., 78, 547, 10.1152/physrev.1998.78.2.547
Berge, 2000, Accumulation of dietary cholesterol in sitosterolemia caused by mutations in adjacent ABC transporters, Science, 290, 1771, 10.1126/science.290.5497.1771
Bos, 1987, Prevalence of ras gene mutations in human colorectal cancers, Nature, 327, 293, 10.1038/327293a0
Brabender, 2004, A multigene expression panel for the molecular diagnosis of Barrett's esophagus and Barrett's adenocarcinoma of the esophagus, Oncogene, 23, 4780, 10.1038/sj.onc.1207663
Cao, 2001, Genomic profiling of short- and long-term caloric restriction effects in the liver of aging mice, Proc. Natl. Acad. Sci. U.S.A., 98, 10630, 10.1073/pnas.191313598
Chen, 1993, Identification of a new P450 subfamily, CYP4F1, expressed in rat hepatic tumors, Arch. Biochem. Biophys., 300, 18, 10.1006/abbi.1993.1003
Chernoff, 1985, Aging and nutrition, Compr. Ther., 11, 29
Coschigano, 2000, Assessment of growth parameters and life span of GHR/BP gene-disrupted mice, Endocrinology, 141, 2608, 10.1210/en.141.7.2608
Crott, 2004, Effects of dietary folate and aging on gene expression in the colonic mucosa of rats: implications for carcinogenesis, Carcinogenesis, 25, 69, 10.1093/carcin/bgg150
Dahlberg, 2004, Gene expression profiles in esophageal adenocarcinoma, Ann. Thorac. Surg., 77, 1008, 10.1016/j.athoracsur.2003.09.051
Dhahbi, 2004, Temporal linkage between the phenotypic and genomic responses to caloric restriction, Proc. Natl. Acad. Sci. U.S.A., 101, 5524, 10.1073/pnas.0305300101
Dieckgraefe, 2000, Analysis of mucosal gene expression in inflammatory bowel disease by parallel oligonucleotide arrays, Physiol. Genomics, 4, 1, 10.1152/physiolgenomics.2000.4.1.1
Dreosti, 1998, Nutrition, cancer, and aging, Ann. N. Y. Acad. Sci., 854, 371, 10.1111/j.1749-6632.1998.tb09917.x
Dufour, 2004, Understanding aging: revealing order out of chaos, Biochim. Biophys. Acta, 1658, 122, 10.1016/j.bbabio.2004.04.020
Edwards, 2003, Age-related impairment of the transcriptional responses to oxidative stress in the mouse heart, Physiol. Genomics, 13, 119, 10.1152/physiolgenomics.00172.2002
Englander, 2004, Alterations in stomach ghrelin production and in ghrelin-induced growth hormone secretion in the aged rat, Mech. Ageing Dev., 125, 871, 10.1016/j.mad.2004.06.011
Evason, 2005, Anticonvulsant medications extend worm life-span, Science, 307, 258, 10.1126/science.1105299
Finn, 1994, Alternative splicing of CD44 pre-mRNA in human colorectal tumors, Biochem. Biophys. Res. Commun., 200, 1015, 10.1006/bbrc.1994.1551
Fleming, 1994, Intestinal cell respiration is influenced by animal age, strain, and feeding status, J. Gerontol., 49, B22, 10.1093/geronj/49.1.B22
Fleming, 1997, Aging stimulates fatty acid oxidation in rat colonocytes but does not influence the response to dietary fiber, J. Gerontol. A Biol. Sci. Med. Sci., 52, B318, 10.1093/gerona/52A.6.B318
Franceschi, 2005, Genes involved in immune response/inflammation, IGF1/insulin pathway and response to oxidative stress play a major role in the genetics of human longevity: the lesson of centenarians, Mech. Ageing Dev., 126, 351, 10.1016/j.mad.2004.08.028
Frigerio, 1995, Cloning, sequencing and expression of the L5, L21, L27a, L28, S5, S9, S10 and S29 human ribosomal protein mRNAs, Biochim. Biophys. Acta, 1262, 64, 10.1016/0167-4781(95)00045-I
Gonos, 2000, Genetics of aging: lessons from centenarians, Exp. Gerontol., 35, 15, 10.1016/S0531-5565(99)00075-3
Gotley, 1996, Alternatively spliced variants of the cell adhesion molecule CD44 and tumour progression in colorectal cancer, Br. J. Cancer, 74, 342, 10.1038/bjc.1996.364
Hallberg, 2000, Effects of aging and caloric restriction on IGF-I, IGF-I receptor, IGFBP-3 and IGFBP-4 gene expression in the rat stomach and colon, Regul. Pept., 89, 37, 10.1016/S0167-0115(00)00095-1
Han, 2000, cDNA expression arrays reveal incomplete reversal of age-related changes in gene expression by calorie restriction, Mech. Ageing Dev., 115, 157, 10.1016/S0047-6374(00)00119-6
Haraguchi, 2004, Analysis of gastric cancer with cDNA microarray, Cancer Chemother. Pharmacol., 54, S21
Holzenberger, 2004, The GH/IGF-I axis and longevity, Eur. J. Endocrinol., 151, S23, 10.1530/eje.0.151S023
Hooper, 2001, Molecular analysis of commensal host–microbial relationships in the intestine, Science, 291, 881, 10.1126/science.291.5505.881
Hoops, 1997, Molecular pathogenesis of colorectal cancer, Hematol. Oncol. Clin. North Am., 11, 609, 10.1016/S0889-8588(05)70453-6
Johnson, 1999, Molecular biology of aging, Cell, 96, 291, 10.1016/S0092-8674(00)80567-X
Jones, 1995, Insulin-like growth factors and their binding proteins: biological actions, Endocr. Rev., 16, 3
Judge, 2005, Age-associated increases in oxidative stress and antioxidant enzyme activities in cardiac interfibrillar mitochondria: implications for the mitochondrial theory of aging, FASEB J., 19, 419, 10.1096/fj.04-2622fje
Khandwala, 2000, The effects of insulin-like growth factors on tumorigenesis and neoplastic growth, Endocr. Rev., 21, 215, 10.1210/er.21.3.215
Kim, 1994, CD44 expression in colorectal adenomas is an early event occurring prior to K-ras and p53 gene mutation, Arch. Biochem. Biophys., 310, 504, 10.1006/abbi.1994.1199
Lakshman, 2004, CD44 negatively regulates apoptosis in murine colonic epithelium via the mitochondrial pathway, Exp. Mol. Pathol., 76, 196, 10.1016/j.yexmp.2003.12.009
Lawrance, 2001, Ulcerative colitis and Crohn's disease: distinctive gene expression profiles and novel susceptibility candidate genes, Hum. Mol. Genet., 10, 445, 10.1093/hmg/10.5.445
Lee, 1999, Gene expression profile of aging and its retardation by caloric restriction, Science, 285, 1390, 10.1126/science.285.5432.1390
Lee, 2000, Gene-expression profile of the ageing brain in mice, Nat. Genet., 25, 294, 10.1038/77046
Lee, 2001, Age-associated changes in gene expression patterns in the duodenum and colon of rats, Mech. Ageing Dev., 122, 355, 10.1016/S0047-6374(00)00254-2
Lesher, 1968, Effects of age on cell proliferation in mouse duodenal crypts, Exp. Gerontol., 3, 211, 10.1016/0531-5565(68)90004-1
Libina, 2003, Tissue-specific activities of C. elegans DAF-16 in the regulation of lifespan, Cell, 115, 489, 10.1016/S0092-8674(03)00889-4
Lou, 1999, Methylation of the CD44 metastasis suppressor gene in human prostate cancer, Cancer Res., 59, 2329
Ly, 2000, Mitotic misregulation and human aging, Science, 287, 2486, 10.1126/science.287.5462.2486
Majumdar, 1997, Effect of aging on the gastrointestinal tract and the pancreas, Proc. Soc. Exp. Biol. Med., 215, 134, 10.3181/00379727-215-44120
Mathur, 1998, Overexpression of elongation factor-1gamma protein in colorectal carcinoma, Cancer, 82, 816, 10.1002/(SICI)1097-0142(19980301)82:5<816::AID-CNCR3>3.0.CO;2-H
Mays-Hoopes, 1989, DNA methylation in aging and cancer, J. Gerontol., 44, 35, 10.1093/geronj/44.6.35
McElwee, 2004, Shared transcriptional signature in Caenorhabditis elegans Dauer larvae and long-lived daf-2 mutants implicates detoxification system in longevity assurance, J. Biol. Chem., 279, 44533, 10.1074/jbc.M406207200
Mitchell, 1996, CD44 exon variant 6 epitope and hyaluronate synthase are expressed on HT29 human colorectal carcinoma cells in a SCID mouse model of metastasis formation, Clin. Exp. Metastasis, 14, 107, 10.1007/BF00121207
Mullin, 2002, Age- and diet-related increase in transepithelial colon permeability of Fischer 344 rats, Dig. Dis. Sci., 47, 2262, 10.1023/A:1020191412285
Murphy, 2003, Genes that act downstream of DAF-16 to influence the lifespan of Caenorhabditis elegans, Nature, 424, 277, 10.1038/nature01789
Mutch, 2004, Regional variations in ABC transporter expression along the mouse intestinal tract, Physiol. Genomics, 17, 11, 10.1152/physiolgenomics.00150.2003
Orr, 2002, Aging and neural control of the GI tract: IV. Clinical and physiological aspects of gastrointestinal motility and aging, Am. J. Physiol. Gastrointest. Liver Physiol., 283, G1226, 10.1152/ajpgi.00276.2002
Orzechowski, 1995, Expression of CD44v6 is associated with cellular dysplasia in colorectal epithelial cells, Eur. J. Cancer, 31A, 2073, 10.1016/0959-8049(95)00452-1
Paine, 1995, Heterogeneity of cytochrome P450 and its toxicological significance, Hum. Exp. Toxicol., 14, 1, 10.1177/096032719501400101
Park, 1995, The role of cytochrome P450 enzymes in hepatic and extrahepatic human drug toxicity, Pharmacol. Ther., 68, 385, 10.1016/0163-7258(95)02013-6
Park, 2005, Lessons learned from gene expression profile studies of aging and caloric restriction, Ageing Res. Rev., 4, 55, 10.1016/j.arr.2004.09.003
Park, 2005, DNA repair defects in stem cell function and aging, Annu. Rev. Med., 56, 495, 10.1146/annurev.med.56.082103.104546
Pogue-Geile, 1991, Ribosomal protein genes are overexpressed in colorectal cancer: isolation of a cDNA clone encoding the human S3 ribosomal protein, Mol. Cell Biol., 11, 3842, 10.1128/MCB.11.8.3842
Rao, 2001, Gene expression profiling of low selenium status in the mouse intestine: transcriptional activation of genes linked to DNA damage, cell cycle control and oxidative stress, J. Nutr., 131, 3175, 10.1093/jn/131.12.3175
Rappuoli, 2000, Pushing the limits of cellular microbiology: microarrays to study bacteria-host cell intimate contacts, Proc. Natl. Acad. Sci. U.S.A., 97, 13467, 10.1073/pnas.010505497
Rashid, 2004, CpG island methylation in gastroenterologic neoplasia: a maturing field, Gastroenterology, 127, 1578, 10.1053/j.gastro.2004.09.007
Renehan, 2004, Insulin-like growth factor (IGF)-I, IGF binding protein-3, and cancer risk: systematic review and meta-regression analysis, Lancet, 363, 1346, 10.1016/S0140-6736(04)16044-3
Roediger, 1980, Anaerobic bacteria, the colon and colitis, Aust. N. Z. J. Surg., 50, 73, 10.1111/j.1445-2197.1980.tb04500.x
Rogina, 2000, Extended life-span conferred by cotransporter gene mutations in Drosophila, Science, 290, 2137, 10.1126/science.290.5499.2137
Rudzki, 1997, Changes in CD44 expression during carcinogenesis of the mouse colon, Exp. Mol. Pathol., 64, 114, 10.1006/exmp.1997.2214
Sager, 1997, Maspin. A tumor suppressing serpin, Adv. Exp. Med. Biol., 425, 77, 10.1007/978-1-4615-5391-5_8
Seftor, 1998, Maspin suppresses the invasive phenotype of human breast carcinoma, Cancer Res., 58, 5681
Sheng, 1996, Maspin acts at the cell membrane to inhibit invasion and motility of mammary and prostatic cancer cells, Proc. Natl. Acad. Sci. U.S.A., 93, 11669, 10.1073/pnas.93.21.11669
Son, 2002, Maspin expression in human gastric adenocarcinoma, Pathol. Int., 52, 508, 10.1046/j.1440-1827.2002.01381.x
Sy, 1997, CD44 as a marker in human cancers, Curr. Opin. Oncol., 9, 108, 10.1097/00001622-199701000-00017
Thrasher, 1967, Age and the cell cycle of the mouse colonic epithelium, Anat. Rec., 157, 621, 10.1002/ar.1091570408
Thrasher, 1965, The duodenal progenitor population. II. Age related changes in size and distribution, J. Exp. Zool., 159, 385, 10.1002/jez.1401590311
Vogelstein, 1988, Genetic alterations during colorectal-tumor development, N. Engl. J. Med., 319, 525, 10.1056/NEJM198809013190901
Wang, 2002, Ghrelin—not just another stomach hormone, Regul. Pept., 105, 75, 10.1016/S0167-0115(02)00012-5
Williams, 1992, Cytochrome P450. Mechanisms of action and clinical implications, J. Fla. Med. Assoc., 79, 405
Wong, 1997, Expression of CD44 splice variants in colorectal cancer, Br. J. Surg., 84, 363, 10.1002/bjs.1800840328