GRAM: A framework for geodesic registration on anatomical manifolds

Medical Image Analysis - Tập 14 - Trang 633-642 - 2010
Jihun Hamm1, Dong Hye Ye2, Ragini Verma1,2, Christos Davatzikos1,2
1Department of Radiology, University of Pennsylvania, 3600 Market Street, Suite 380, Philadelphia, PA 19104, USA
2Department of Bioengineering, 210 S. 33rd Street, Room 240 Skirkanich Hall, Philadelphia, PA 19104, USA

Tài liệu tham khảo

Avants, 2004, Geodesic estimation for large deformation anatomical shape averaging and interpolation, NeuroImage, 23, S139, 10.1016/j.neuroimage.2004.07.010 Avants, 2008, Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain, Medical Image Analysis, 12, 26, 10.1016/j.media.2007.06.004 Bajcsy, 1983, A computerized system for the elastic matching of deformed radiographic images to idealized atlas images, Journal of Computer Assisted Tomography, 7, 618, 10.1097/00004728-198308000-00008 Beg, 2005, Computing large deformation metric mappings via geodesic flows of diffeomorphisms, International Journal of Computer Vision, 61, 139, 10.1023/B:VISI.0000043755.93987.aa Blezek, 2006, Atlas stratification, MICCAI, 712 Bookstein, 1991, Thin-plate splines and the atlas problem for biomedical images, Information Processing in Medical Imaging, 511, 326, 10.1007/BFb0033763 Christensen, 1996, Deformable templates using large deformation kinematics, IEEE Transactions on Image Processing, 5, 1435, 10.1109/83.536892 Christensen, 2003, Invertibility and transitivity analysis for nonrigid image registration, SPIE Electronic Imaging, 12, 106, 10.1117/1.1526494 Davatzikos, 1997, Spatial transformation and registration of brain images using elastically deformable models, Computer Vision of Image Understanding, 66, 207, 10.1006/cviu.1997.0605 de Silva, 2002, Global versus local methods in nonlinear dimensionality reduction, Advances in Neural Information Processing Systems, 15, 705 Dupuis, 1998, Variational problems on flows of diffeomorphisms for image matching, Quarterly of Applied Mathematics, 56, 587, 10.1090/qam/1632326 Gerber, 2009, On the manifold structure of the space of brain images, MICCAI, 305 Grenander, 1993 Grenander, 1998, Computational anatomy: an emerging discipline, Quarterly of Applied Mathematics, LVI, 617, 10.1090/qam/1668732 Haber, 2007, Image registration with guaranteed displacement regularity, International Journal of Computer Vision, 71, 361, 10.1007/s11263-006-8984-4 Hamm, 2009, Efficient large deformation registration via geodesics on a learned manifold of images, MICCAI, 680 Hamm, J., Lee, D.D., Mika, S., Schölkopf, B., 2004. A kernel view of the dimensionality reduction of manifolds. In: ICML ’04: Proceedings of the Twenty-first International Conference on Machine Learning, p. 47+. Ibanez, L., Schroeder, W., Ng, L., Cates, J., 2005. The ITK Software Guide. Kitware, Inc. <http://www.itk.org/ItkSoftwareGuide.pdf>. Joshi, 2004, Unbiased diffeomorphic atlas construction for computational anatomy, NeuroImage, 23, 151, 10.1016/j.neuroimage.2004.07.068 Karaçali, 2004, Estimating topology preserving and smooth displacement fields, IEEE Transaction on Medical Imaging, 23, 868, 10.1109/TMI.2004.827963 Marcus, 2007, Open access series of imaging studies (OASIS): cross-sectional MRI data in young, middle aged, nondemented, and demented older adults, Journal of Cognitive Neuroscience, 19, 1498, 10.1162/jocn.2007.19.9.1498 Ou, 2009, Dramms: deformable registration via attribute matching and mutual-saliency weighting, Information Processing in Medical Imaging, 50, 10.1007/978-3-642-02498-6_5 Rohde, 2008, Deformation-based nuclear morphometry: capturing nuclear shape variation in hela cells, Cytometry Part A, 73A, 341, 10.1002/cyto.a.20506 Rueckert, 2006, Diffeomorphic registration using b-splines, MICCAI, 702 Rueckert, 1999, Nonrigid registration using free-form deformations: application to breast MR images, IEEE Transaction on Medical Imaging, 712, 10.1109/42.796284 Sabuncu, 2008, Discovering modes of an image population through mixture modeling, MICCAI, 11, 381 Shen, 2002, HAMMER: hierarchical attribute matching mechanism for elastic registration, IEEE Transactions on Medical Imaging, 21, 1421, 10.1109/TMI.2002.803111 Tenenbaum, 2000, A global geometric framework for nonlinear dimensionality reduction, Science, 290, 2319, 10.1126/science.290.5500.2319 Trouvé, 2005, Metamorphoses through lie group action, Foundations of Computational Mathematics, 5, 173, 10.1007/s10208-004-0128-z Vercauteren, 2007, Non-parametric diffeomorphic image registration with the demons algorithm, MICCAI, 319 Yeo, 2009, Spherical demons: fast diffeomorphic landmark-free surface registration, IEEE Transactions on Medical Imaging