GENECLASS2: A Software for Genetic Assignment and First-Generation Migrant Detection
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Baudouin L and Lebrun P, 2000. An operational bayesian approach for the identification of sexually reproduced cross-fertilized populations using molecular markers. In: Proceedings of the International Symposium on Molecular Markers for Characterizing Genotypes and Identifying Cultivars in Horticulture, Montpellier, France, March 6–9, 2000 (Doré C, Dosba F and Baril C, eds). Leuven, Belgium: International Society for Horticultural Science; 81–93.
Belkhir K, Borsa P, Chikhi L, Raufaste N, and Bonhomme F, 1996. GENETIX 4.02, logiciel sous Windows TM pour la génétique des populations, Laboratoire Génome, Populations, Interactions; CNRS UMR 5000; Université Montpellier II, Montpellier, France.
Cavalli-Sforza LL and Edwards AWF, 1967. Phylogenetic analysis: models and estimation procedures. Am J Hum Genet19:233–257.
Cornuet JM, Piry S, Luikart G, Estoup A, and Solignac M, 1999. New methods employing multilocus genotypes to select or exclude populations as origins of individuals. Genetics153:1989–2000.
Efron B, 1983. Estimating the error rate of a prediction rule: improvement on cross-validation. J Am Stat Assoc78:316–331.
Estoup A and Angers B, 1998. Microsatellites and minisatellites for molecular ecology: theoretical and empirical considerations. In: Advances in molecular ecology (Carvalho G, ed). Amsterdam: IOS Press; 55–86.
Estoup A, Rousset F, Michalakis Y, Cornuet JM, Adriamanga M, and Guyomard R, 1998. Comparative analysis of microsatellite and allozyme markers: a case study investigating microgeographic differentiation in brown trout (Salmo trutta). Mol Ecol7:339–353.
Goldstein DB, Ruiz Linares A, Cavalli-Sforza LL, and Feldman MW, 1995. Genetic absolute dating based on microsatellites and the origin of modern humans. Proc Natl Acad Sci USA92:6723–6727.
Nei M, Tajima F, and Tateno Y, 1983. Accuracy of estimated phylogenetic trees from molecular data. J Mol Evol19:153–170.
Paetkau D, Calvert W, Stirling I, and Strobeck C, 1995. Microsatellite analysis of population structure in Canadian polar bears. Mol Ecol4:347–354.
Paetkau D, Slade R, Burden M, and Estoup A, 2004. Genetic assignment methods for the direct, real-time estimation of migration rate: a simulation-based exploration of accuracy and power. Mol Ecol13:55–65.
Rannala B and Mountain JL, 1997. Detecting immigration by using multilocus genotypes. Proc Natl Acad Sci USA94:9197–9201.
Raymond M and Rousset F, 1995. GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. J Hered86:248–249.
Stephens JC, Briscoe D, and O'Brien SJ, 1994. Mapping by admixture linkage disequilibrium in human populations: limits and guidelines. Am J Hum Genet55:809–824.