GAEC1 mutations and copy number aberration is associated with biological aggressiveness of colorectal cancer
Tài liệu tham khảo
Cao, 2015, Three-dimensional regulation of transcription, Protein Cell, 6, 241, 10.1007/s13238-015-0135-7
Chan, 2013, Oncogene GAEC1 regulates CAPN10 expression which predicts survival in esophageal squamous cell carcinoma, World J. Gastroenterol., 19, 2772, 10.3748/wjg.v19.i18.2772
Choi, 2015, PROVEAN web server: a tool to predict the functional effect of amino acid substitutions and indels, Bioinformatics (Oxford, England), 31, 2745, 10.1093/bioinformatics/btv195
Gopalan, 2010, GAEC1 and colorectal cancer: a study of the relationships between a novel oncogene and clinicopathologic features, Hum. Pathol., 41, 1009, 10.1016/j.humpath.2009.11.014
Gopalan, 2013, Gene amplified in oesophageal cancer 1 (GAEC1) amplification in colorectal cancers and its impact on patient's survival, J. Clin. Pathol., 66, 721, 10.1136/jclinpath-2013-201459
Hamilton, 2010, Carcinoma of the colon and rectum. WHO Classification of Tumours of the Digestive System, vol. 3, 134
Hindson, 2011, High-throughput droplet digital PCR system for absolute quantitation of DNA copy number, Anal. Chem., 83, 8604, 10.1021/ac202028g
Hrdlickova, 2014, Genetic variation in the non-coding genome: involvement of micro-RNAs and long non-coding RNAs in disease, Biochim. Biophys. Acta, 1842, 1910, 10.1016/j.bbadis.2014.03.011
Iafrate, 2004, Detection of large-scale variation in the human genome, Nat. Genet., 36, 949, 10.1038/ng1416
Jovelin, 2016, Hitting two birds with one stone: the unforeseen consequences of nested gene knockouts in Caenorhabditis elegans, Worm, 5, e1156835, 10.1080/21624054.2016.1156835
Koussounadis, 2015, Relationship between differentially expressed mRNA and mRNA-protein correlations in a xenograft model system, Sci. Rep., 5, 10775, 10.1038/srep10775
Lam, 2008, p16 expression in colorectal adenocarcinoma: marker of aggressiveness and morphological types, Pathology, 40, 580, 10.1080/00313020802320713
Law, 2007, Identification of a novel tumor transforming gene GAEC1 at 7q22 which encodes a nuclear protein and is frequently amplified and overexpressed in esophageal squamous cell carcinoma, Oncogene, 26, 5877, 10.1038/sj.onc.1210390
Lee, 2013, The evolution and functional significance of nested gene structures in Drosophila melanogaster, Genome Biol. Evol., 5, 1978, 10.1093/gbe/evt149
Li, 2015, A dual model for prioritizing cancer mutations in the non-coding genome based on germline and somatic events, PLoS Comput. Biol., 11, e1004583, 10.1371/journal.pcbi.1004583
Lupski, 2007, Structural variation in the human genome, N. Engl. J. Med., 356, 1169, 10.1056/NEJMcibr067658
Maier, 2009, Correlation of mRNA and protein in complex biological samples, FEBS Lett., 583, 3966, 10.1016/j.febslet.2009.10.036
McDermott, 2013, Multiplexed target detection using DNA-binding dye chemistry in droplet digital PCR, Anal. Chem., 85, 11619, 10.1021/ac403061n
Milburn, 2017, Colon and rectum, 251
Pinheiro, 2012, Evaluation of a droplet digital polymerase chain reaction format for DNA copy number quantification, Anal. Chem., 84, 1003, 10.1021/ac202578x
Polychronakos, 2012, Gene expression as a quantitative trait: what about translation?, J. Med. Genet., 49, 554, 10.1136/jmedgenet-2012-101199
Rosenbloom, 2015, The UCSC genome browser database: 2015 update, Nucleic Acids Res., 43, D670, 10.1093/nar/gku1177
Schwarz, 2014, MutationTaster2: mutation prediction for the deep-sequencing age, Nat. Methods, 11, 361, 10.1038/nmeth.2890
Tang, 2001, Detection of genetic alterations in esophageal squamous cell carcinomas and adjacent normal epithelia by comparative DNA fingerprinting using inter-simple sequence repeat PCR, Clin. Cancer Res., 7, 1539
Wahab, 2017, Cellular expression, in-vitro and in-vivo confirmation of GAEC1 oncogenic properties in colon cancer, Eur. J. Cell Biol., 96, 487, 10.1016/j.ejcb.2017.07.003
Zhang, 2011, International cancer genome consortium data portal–a one-stop shop for cancer genomics data, Database, 10.1093/database/bar026