Functional genomics of plant photosynthesis in the fast lane using Chlamydomonas reinhardtii

Trends in Plant Science - Tập 6 Số 8 - Trang 364-371 - 2001
Rachel M. Dent1, Miehie Han1, Krishna Niyogi1
1Department of Plant & Microbial Biology, University of California, Berkeley, CA 94720-3102, USA

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Rochaix, 1998

Hippler, 1998, Chlamydomonas genetics, a tool for the study of bioenergetic pathways, Biochim. Biophys. Acta Mol. Cell Res., 1367, 1, 10.1016/S0005-2728(98)00136-4

Lefebvre, 1999, Chlamydomonas: the cell and its genomes, Genetics, 151, 9, 10.1093/genetics/151.1.9

Grossman, 2000, Chlamydomonas reinhardtii and photosynthesis: genetics to genomics, Curr. Opin. Plant Biol., 3, 132, 10.1016/S1369-5266(99)00053-9

Nickelsen, 2000, The unicellular green alga Chlamydomonas reinhardtii as an experimental system to study chloroplast RNA metabolism, Naturwissenschaften, 87, 97, 10.1007/s001140050686

Rochaix, 2000, Chloroplast site-directed mutagenesis of photosystem I in Chlamydomonas: electron transfer reactions and light sensitivity, Biochimie, 82, 635, 10.1016/S0300-9084(00)00604-0

Harris, 2001, Chlamydomonas as a model organism, Annu. Rev. Plant Physiol. Plant Mol. Biol., 52, 363, 10.1146/annurev.arplant.52.1.363

Kaneko, 1996, Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions, DNA Res., 3, 109, 10.1093/dnares/3.3.109

Sikdar, 1998, Plastid transformation of Arabidopsis thaliana, Plant Cell Rep., 18, 20, 10.1007/s002990050525

Svab, 1993, High-frequency plastid transformation in tobacco by selection for a chimeric aadA gene, Proc. Natl. Acad. Sci. U. S. A., 90, 913, 10.1073/pnas.90.3.913

Goldschmidt-Clermont, 1991, Transgenic expression of aminoglycoside adenine transferase in the chloroplast: a selectable marker for site-directed transformation of Chlamydomonas, Nucleic Acids Res., 19, 4083, 10.1093/nar/19.15.4083

Bateman, 2000, Tools for chloroplast transformation in Chlamydomonas: expression vectors and a new dominant selectable marker, Mol. Gen. Genet., 263, 404, 10.1007/s004380051184

Vermaas, 1998, Gene modifications and mutation mapping to study the function of photosystem II, Methods Enzymol., 297, 293, 10.1016/S0076-6879(98)97022-7

Lumbreras, 1998, Efficient foreign gene expression in Chlamydomonas reinhardtii mediated by an endogenous intron, Plant J., 14, 441, 10.1046/j.1365-313X.1998.00145.x

Zabawinski, 2001, Starchless mutants of Chlamydomonas reinhardtii lack the small subunit of a heterotetrameric ADP-glucose pyrophosphorylase, J. Bacteriol., 183, 1069, 10.1128/JB.183.3.1069-1077.2001

Barkan, 2000, Participation of nuclear genes in chloroplast gene expression, Biochimie, 82, 559, 10.1016/S0300-9084(00)00602-7

Kuchka, 1989, Mutation at the Chlamydomonas nuclear NAC2 locus specifically affects stability of the chloroplast psbD transcript encoding polypeptide D2 of PSII, Cell, 58, 869, 10.1016/0092-8674(89)90939-2

Nickelsen, 1999, Identification of cis-acting RNA leader elements required for chloroplast psbD gene expression in Chlamydomonas, Plant Cell, 11, 957, 10.1105/tpc.11.5.957

Ossenbühl, 2000, cis- and trans-acting determinants for translation of psbD mRNA in Chlamydomonas reinhardtii, Mol. Cell. Biol., 20, 8134, 10.1128/MCB.20.21.8134-8142.2000

Boudreau, 2000, The Nac2 gene of Chlamydomonas encodes a chloroplast TPR-like protein involved in psbD mRNA stability, EMBO J., 19, 3366, 10.1093/emboj/19.13.3366

Nickelsen, 2000, Mutations at three different nuclear loci of Chlamydomonas suppress a defect in chloroplast psbD mRNA accumulation, Curr. Genet., 37, 136, 10.1007/s002940050020

Vaistij, 2000, Characterization of Mbb1, a nucleus-encoded tetratricopeptide-like repeat protein required for expression of the chloroplast psbB/psbT/psbH gene cluster in Chlamydomonas reinhardtii, Proc. Natl. Acad. Sci. U. S. A., 97, 14813, 10.1073/pnas.97.26.14813

Vaistij, 2000, Stability determinants in the chloroplast psbB/T/H mRNAs of Chlamydomonas reinhardtii, Plant J., 21, 469, 10.1046/j.1365-313x.2000.00700.x

Fisk, 1999, Molecular cloning of the maize gene crp1 reveals similarity between regulators of mitochondrial and chloroplast gene expression, EMBO J., 18, 2621, 10.1093/emboj/18.9.2621

Rhee, 1998, Three-dimensional structure of the plant photosystem II reaction centre at 8 Å resolution, Nature, 396, 283, 10.1038/24421

Farah, 1995, Isolation of a psaF-deficient mutant of Chlamydomonas reinhardtii: efficient interaction of plastocyanin with the photosystem I reaction center is mediated by the PsaF subunit, EMBO J., 14, 4976, 10.1002/j.1460-2075.1995.tb00180.x

Hippler, 1998, The N-terminal domain of PsaF: precise recognition site for binding and fast electron transfer from cytochrome c6 and plastocyanin to photosystem I of Chlamydomonas reinhardtii, Proc. Natl. Acad. Sci. U. S. A., 95, 7339, 10.1073/pnas.95.13.7339

Fischer, 1999, A large fraction of PsaF is nonfunctional in photosystem I complexes lacking the PsaJ subunit, Biochemistry, 38, 5546, 10.1021/bi982821a

Redding, 1998, A systematic survey of conserved histidines in the core subunits of photosystem I by site-directed mutagenesis reveals the likely axial ligands of P700, EMBO J., 17, 50, 10.1093/emboj/17.1.50

Guergova-Kuras, 2001, Evidence for two active branches for electron transfer in photosystem I, Proc. Natl. Acad. Sci. U. S. A., 44, 4437, 10.1073/pnas.081078898

Niyogi, 1997, Chlamydomonas xanthophyll cycle mutants identified by video imaging of chlorophyll fluorescence quenching, Plant Cell, 9, 1369, 10.1105/tpc.9.8.1369

Niyogi, 1997, The roles of specific xanthophylls in photoprotection, Proc. Natl. Acad. Sci. U. S. A., 94, 14162, 10.1073/pnas.94.25.14162

Zito, 1999, The Qo site of cytochrome b6f complexes controls the activation of the LHCII kinase, EMBO J., 18, 2961, 10.1093/emboj/18.11.2961

Fleischmann, 1999, Isolation and characterization of photoautotrophic mutants of Chlamydomonas reinhardtii deficient in state transition, J. Biol. Chem., 274, 30987, 10.1074/jbc.274.43.30987

Kruse, 1999, Isolation of state transition mutants of Chlamydomonas reinhardtii by fluorescence video imaging, Photosynth. Res., 61, 43, 10.1023/A:1006229308606

Moseley, 2000, The Crd1 gene encodes a putative di-iron enzyme required for photosystem I accumulation in copper deficiency and hypoxia in Chlamydomonas reinhardtii, EMBO J., 219, 2139, 10.1093/emboj/19.10.2139

Crutchfield, 1999, Cryopreservation of Chlamydomonas reinhardtii (Chlorophyta), Eur. J. Phycol., 34, 43, 10.1080/09670269910001736072

Wang, 1998, Isolation and characterization of a new transposable element in Chlamydomonas reinhardtii, Plant Mol. Biol., 38, 681, 10.1023/A:1006033126011

Funke, 1997, Intracellular carbonic anhydrase is essential to photosynthesis in Chlamydomonas reinhardtii at atmospheric levels of CO2. Demonstration via genomic complementation of the high-CO2-requiring mutant ca-1, Plant Physiol., 114, 237, 10.1104/pp.114.1.237

Gross, 1988, Extensive restriction fragment length polymorphisms in a new isolate of Chlamydomonas reinhardtii, Curr. Genet., 13, 503, 10.1007/BF02427756

Bouchez, 1998, Functional genomics in plants, Plant Physiol., 118, 725, 10.1104/pp.118.3.725

McCallum, 2000, Targeting induced local lesions in genomes (TILLING) for plant functional genomics, Plant Physiol., 123, 439, 10.1104/pp.123.2.439

Schroda, 2000, The HSP70A promoter as a tool for the improved expression of transgenes in Chlamydomonas, Plant J., 21, 121, 10.1046/j.1365-313x.2000.00652.x

Wu-Scharf, 2000, Transgene and transposon silencing in Chlamydomonas reinhardtii by a DEAH-box RNA helicase, Science, 290, 1159, 10.1126/science.290.5494.1159

Pesaresi, 2001, Functional genomics of Arabidopsis photosynthesis, Plant Physiol. Biochem., 39, 285, 10.1016/S0981-9428(01)01238-4

Wollman, 1999, The biogenesis and assembly of photosynthetic proteins in thylakoid membranes, Biochim. Biophys. Acta, 1411, 21, 10.1016/S0005-2728(99)00043-2