Functional characterization of alternatively spliced GSN in head and neck squamous cell carcinoma
Tài liệu tham khảo
Banister, 2017, Identification and characterization of HPV-independent cervical cancers, Oncotarget, 8, 13375, 10.18632/oncotarget.14533
Guo, 2017, A novel functional splice variant of AKT3 defined by analysis of alternative splice expression in HPV-positive oropharyngeal cancers, Cancer Res, 77, 5248, 10.1158/0008-5472.CAN-16-3106
R, 2014, Expression microarray analysis reveals alternative splicing of LAMA3 and DST genes in head and neck squamous cell carcinoma, PLoS One, 9, e91263, 10.1371/journal.pone.0091263
Körner, 2009, Alternative splicing of pre-mRNA in cancer: focus on G protein-coupled peptide hormone receptors, Am J Pathol, 175, 461, 10.2353/ajpath.2009.081135
2015, Comprehensive genomic characterization of head and neck squamous cell carcinomas, Nature, 517, 576, 10.1038/nature14129
Boscolo-Rizzo, 2013, New insights into human papillomavirus-associated head and neck squamous cell carcinoma, Acta Otorhinolaryngol Ital, 33, 77
Suresh, 2017, The emerging role of immunotherapy in head and neck squamous cell cancer, AJHO, 13, 20
Cognetti, 2008, Head and neck cancer: an evolving treatment paradigm, Cancer, 113, 1911, 10.1002/cncr.23654
2016
Ran, 2017, Inhibitors of the PD-1/PD-L1 axis for the treatment of head and neck cancer: current status and future perspectives, Drug Des Dev Ther, 11, 2007, 10.2147/DDDT.S140687
Ochs, 2014, Outlier analysis and top scoring pair for integrated data analysis and biomarker discovery, IEEE/ACM Trans Comput Biol Bioinform, 11, 520, 10.1109/TCBB.2013.153
MacDonald, 2006, COPA–cancer outlier profile analysis, Bioinformatics, 22, 2950, 10.1093/bioinformatics/btl433
Guo, 2016, Characterization of functionally active gene fusions in human papillomavirus related oropharyngeal squamous cell carcinoma, Int J Cancer, 139, 373, 10.1002/ijc.30081
Sebestyen, 2015, Detection of recurrent alternative splicing switches in tumor samples reveals novel signatures of cancer, Nucleic Acids Res, 43, 1345, 10.1093/nar/gku1392
Fujita, 1995, Functions of [His321]gelsolin isolated from a flat revertant of ras-transformed cells, Eur J Biochem, 229, 615, 10.1111/j.1432-1033.1995.tb20505.x
Kothakota, 1997, Caspase-3-generated fragment of gelsolin: effector of morphological change in apoptosis, Science (New York, NY), 278, 294, 10.1126/science.278.5336.294
Hanahan, 2011, Hallmarks of cancer: the next generation, Cell, 144, 646, 10.1016/j.cell.2011.02.013
Winston, 2001, Downregulation of gelsolin correlates with the progression to breast carcinoma, Breast Cancer Res Treat, 65, 11, 10.1023/A:1006446108411
Hatakeyama, 2010, Regulation of heparin-binding EGF-like growth factor by miR-212 and acquired cetuximab-resistance in head and neck squamous cell carcinoma, PLoS One, 5, e12702, 10.1371/journal.pone.0012702
Gaykalova, 2012, Dose-dependent activation of putative oncogene SBSN by BORIS, PLoS One, 7, e40389, 10.1371/journal.pone.0040389
Ahmed, 1994, A new rapid and simple non-radioactive assay to monitor and determine the proliferation of lymphocytes: an alternative to [3H]thymidine incorporation assay, J Immunol Methods, 170, 211, 10.1016/0022-1759(94)90396-4
Magro A. apoptotic events in glioma activate metalloproteinases and enhance invasiveness, Fairmont, WV, USA, 2013 [updated Feb 27].
Livaka, 2001, Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔCT method, Methods, 25, 402, 10.1006/meth.2001.1262
Pierce, 2003
Gaykalova, 2017, Integrative computational analysis of transcriptional and epigenetic alterations implicates DTX1 as a putative tumor suppressor gene in HNSCC, Oncotarget, 8, 15349, 10.18632/oncotarget.14856
Kent, 2002, The human genome browser at UCSC, Genome Res, 12, 996, 10.1101/gr.229102
Lv, 2014, Single-molecule force spectroscopy reveals force-enhanced binding of calcium ions by gelsolin, Nat Commun, 5, 4623, 10.1038/ncomms5623
dos Remedios, 2003, Actin binding proteins: regulation of cytoskeletal microfilaments, Physiol Rev, 83, 433, 10.1152/physrev.00026.2002
Jones, 2014, InterProScan 5: genome-scale protein function classification, Bioinformatics, 30, 1236, 10.1093/bioinformatics/btu031
GH, 2010, Multifunctional roles of gelsolin in health and disease, Med Res Rev, 32, 999
Fujita, 2001, Gelsolin functions as a metastasis suppressor in B16-BL6 mouse melanoma cells and requirement of the carboxyl-terminus for its effect, Int J Cancer, 93, 773, 10.1002/ijc.1413
Molinolo, 2009, Dysregulated molecular networks in head and neck carcinogenesis, Oral Oncol, 45, 324, 10.1016/j.oraloncology.2008.07.011
Dosaka-Akita, 1998, Frequent loss of gelsolin expression in non-small cell lung cancers of heavy smokers, Cancer Res, 58, 322
Liao, 2011, Overexpression of gelsolin in human cervical carcinoma and its clinicopathological significance, Gynecol Oncol, 120, 135, 10.1016/j.ygyno.2010.10.005
Deng, 2015, Role of gelsolin in cell proliferation and invasion of human hepatocellular carcinoma cells, Gene, 571, 292, 10.1016/j.gene.2015.06.083
Zhuo, 2012, Gelsolin induces colorectal tumor cell invasion via modulation of the urokinase-type plasminogen activator cascade, PLoS One, 7, e43594, 10.1371/journal.pone.0043594
Guo, 2018, Gelsolin regulates proliferation, apoptosis and invasion in natural killer/T-cell lymphoma cells, Biol Open, 7, bio027557, 10.1242/bio.027557
Ma, 2016, Gelsolin promotes cell growth and invasion through the upregulation of p-AKT and p-P38 pathway in osteosarcoma, Tumour Biol, 37, 7165, 10.1007/s13277-015-4565-x
Yeh, 2016, Hypoxia augments increased HIF-1α and reduced survival protein p-Akt in gelsolin (GSN)-dependent cardiomyoblast cell apoptosis, Cell Biochem Biophys, 74, 221, 10.1007/s12013-016-0729-6
Bordeleau, 2015, Tissue stiffness regulates serine/arginine-rich protein-mediated splicing of the extra domain B-fibronectin isoform in tumors, Proc Natl Acad Sci USA, 112, 8314, 10.1073/pnas.1505421112
Song, 2013, CLASS: constrained transcript assembly of RNA-seq reads, BMC Bioinform, 14, S14, 10.1186/1471-2105-14-S5-S14
Song, 2016, CLASS2: accurate and efficient splice variant annotation from RNA-seq reads, Nucleic Acids Res, 44, e98, 10.1093/nar/gkw158
Alamancos, 2015, Leveraging transcript quantification for fast computation of alternative splicing profiles, RNA, 21, 1521, 10.1261/rna.051557.115
Singhi, 2012, High-risk human papillomavirus in nasopharyngeal carcinoma, Head Neck, 34, 213, 10.1002/hed.21714