Flexible Bayesian Modelling for Survival Data

Springer Science and Business Media LLC - Tập 4 - Trang 281-299 - 1998
Paul Gustafson1
1Department of Statistics, University of British Columbia, Vancouver, Canada

Tóm tắt

The analysis of failure time data often involves two strong assumptions. The proportional hazards assumption postulates that hazard rates corresponding to different levels of explanatory variables are proportional. The additive effects assumption specifies that the effect associated with a particular explanatory variable does not depend on the levels of other explanatory variables. A hierarchical Bayes model is presented, under which both assumptions are relaxed. In particular, time-dependent covariate effects are explicitly modelled, and the additivity of effects is relaxed through the use of a modified neural network structure. The hierarchical nature of the model is useful in that it parsimoniously penalizes violations of the two assumptions, with the strength of the penalty being determined by the data.

Tài liệu tham khảo

Besag, J., Green, P., Higdon, D., and Mengersen, K., “Bayesian computation and stochastic systems (with discussion),” Statistical Science, vol 10 pp. 3–36, 1995. Cox, D.R., “Regression models and life tables (with discussion),” Journal of the Royal Statistical Society, Series B, vol 34 pp. 187–220, 1972. Faraggi, D. and Simon, R., “A neural network model for survival data,” Statistics in Medicine, vol 14 pp. 73–82, 1995. Gamerman, D., “Dynamic Bayesian models for survival data,” Applied Statistics, vol 40 pp. 63–79, 1991. Gelman, A. and Rubin, D.B., “Inference from iterative simulation using multiple sequences (with discussion),” Statistical Science, vol 7 pp. 457–472, 1992. Gelman, A., Roberts, G.O., and Gilks, W.R., “Efficient Metropolis Jumping Rules,” in Bayesian Statistics 5 (eds. J.M. Bernardo, J.O. Berger, A.P. Dawid, and A.F.M. Smith), Oxford University Press, 1996. Gray, R.J., “Flexible methods for analyzing survival data using splines, with applications to breast cancer prognosis,” Journal of the American Statistical Association, vol 87 pp. 942–951, 1992. Hastings, W.K.,“Monte Carlo sampling methods using Markov chains and their applications,” Biometrika, vol 57 pp. 97–109, 1970. Horowitz, A.M., “A generalized guided Monte Carlo algorithm,” Physics Letters B, vol 268 pp. 247–252, 1991. Kooperberg, C., Stone, C.J., and Truong, Y.K., “Hazard regression,” Journal of the American Statistical Association, vol 90 pp. 78–94, 1995. LeBlanc, M., and Crowley, J., “Step-function covariate effects in the proportional hazards model,” Canadian Journal of Statistics, vol 23 pp. 109–129, 1995. Liestol, K., Andersen, P.K., and Andersen, U., “Survival analysis and neural nets,” Statistics in Medicine, vol 13 pp. 1189–1200, 1994. Metropolis, N., Rosenbluth, A.W., Rosenbluth, M.N., Teller, A.H., and Teller, E., “Equation of state calculations by fast computing machines,” Journal of Chemical Physics, vol 21 pp. 1087–1092, 1953. Morris, C.N., Norton, E.C., and Zhou, X.H., “Parametric duration analysis of nursing home usage,” in Case Studies in Biometry (eds N. Lange, L. Ryan, L. Billard, D. Brillinger, L. Conquest, and J. Greenhouse), Wiley: New York, 1994. Neal, R.M., “Bayesian learning via stochastic dynamics,” in Advances in Neural Information Processing Systems 5 (eds. C.L. Giles, S.J. Hanson, and J.D. Cowan), Morgan Kaufmann, 1993a. Neal, R.M., “Probabilistic inference using Markov chain Monte Carlo methods,” Technical Report CRG-TR–93-1, Department of Statistics, University of Toronto, 1993b. Neal, R.M., “Bayesian learning for neural networks,” unpublished Ph.D. thesis, Department of Computer Science, University of Toronto, 1995. Ripley, B., “Neural networks and related methods for classification,” Journal of the Royal Statistical Society, Series B, vol 56 pp. 409–456, 1994. Smith, A.F.M., and Gelfand, A.E., “Bayesian statistics without tears: a sampling-resampling perspective,” American Statistician, vol 88 pp. 84–88, 1992. Smith, A.F.M., and Roberts, G.O., “Bayesian computation via the Gibbs sampler and related Markov chain Monte Carlo methods (with discussion),” Journal of the Royal Statistical Society, Series B, vol 55 pp. 3–23, 1993. Tierney, L., “Markov chains for exploring posterior distributions (with discussion),” Annals of Statistics, vol 22, pp. 1701–1762, 1994.