Fishing impact in Mediterranean ecosystems: an EcoTroph modeling approach

Bianchi, 2000, Marine biodiversity of the Mediterranean Sea: situation, problems and prospects for future research, Mar. Pollut. Bull., 40, 367, 10.1016/S0025-326X(00)00027-8 Bosc, 2004, Seasonal and interannual variability in algal biomass and primary production in the Mediterranean Sea, as derived from 4 years of SeaWiFS observations, Glob. Biogeochem. Cycles, 18, 1005, 10.1029/2003GB002034 Christensen, 2000, Indicators for marine ecosystems affected by fisheries, Mar. Freshw. Res., 51, 447, 10.1071/MF99085 Christensen, 2004, Ecopath with Ecosim: methods, capabilities and limitations, Ecol. Model., 172, 109, 10.1016/j.ecolmodel.2003.09.003 Coll, 2012, Contributions of food web modelling to the ecosystem approach to marine resource management in the Mediterranean Sea: ecosystem approach in the Mediterranean Sea, Fish Fish., 13, 60, 10.1111/j.1467-2979.2011.00420.x Coll, 2006, Trophic flows, ecosystem structure and fishing impacts in the South Catalan Sea, Northwestern Mediterranean, J. Mar. Syst., 59, 63, 10.1016/j.jmarsys.2005.09.001 Coll, 2007, An ecological model of the Northern and Central Adriatic Sea: analysis of ecosystem structure and fishing impacts, J. Mar. Syst., 67, 119, 10.1016/j.jmarsys.2006.10.002 Coll, 2008, Food-web dynamics in the South Catalan Sea ecosystem (NW Mediterranean) for 1978–2003, Ecol. Model., 217, 95, 10.1016/j.ecolmodel.2008.06.013 Coll, 2009, Decadal changes in a NW Mediterranean Sea food web in relation to fishing exploitation, Ecol. Model., 220, 2088, 10.1016/j.ecolmodel.2009.04.049 Coll, 2010, The biodiversity of the Mediterranean Sea: estimates, patterns, and threats, PLoS ONE, 5, e11842, 10.1371/journal.pone.0011842 Coll, 2012, The Mediterranean Sea under siege: spatial overlap between marine biodiversity, cumulative threats and marine reserves: the Mediterranean Sea under siege, Glob. Ecol. Biogeogr., 21, 465, 10.1111/j.1466-8238.2011.00697.x Colléter, 2013, An introduction to the EcoTroph R package: analyzing aquatic ecosystem trophic networks, 98 Colléter, 2014, Fishing inside or outside? A case studies analysis of potential spillover effect from marine protected areas, using food web models, J. Mar. Syst., 139, 383, 10.1016/j.jmarsys.2014.07.023 Cury, 2008, Ecosystem oceanography for global change in fisheries, Trends Ecol. Evol., 23, 338, 10.1016/j.tree.2008.02.005 Cury, 2011, Global seabird response to forage fish depletion—one-third for the birds, Science, 334, 1703, 10.1126/science.1212928 Daskalov, 2002, Overfishing drives a trophic cascade in the Black Sea, Mar. Ecol. Prog. Ser., 225, 53, 10.3354/meps225053 Daskalov, 2007, Trophic cascades triggered by overfishing reveal possible mechanisms of ecosystem regime shifts, Proc. Natl. Acad. Sci., 104, 10518, 10.1073/pnas.0701100104 Fulton, 2004 Gasche, 2012, Global assessment of the fishing impacts on the Southern Benguela ecosystem using an EcoTroph modelling approach, J. Mar. Syst., 90, 1, 10.1016/j.jmarsys.2011.07.012 Gascuel, 2005, The trophic-level based model: a theoretical approach of fishing effects on marine ecosystems, Ecol. Model., 189, 315, 10.1016/j.ecolmodel.2005.03.019 Gascuel, 2009, EcoTroph: modelling marine ecosystem functioning and impact of fishing, Ecol. Model., 220, 2885, 10.1016/j.ecolmodel.2009.07.031 Gascuel, 2008, Trophic flow kinetics in marine ecosystems: toward a theoretical approach to ecosystem functioning, Ecol. Model., 217, 33, 10.1016/j.ecolmodel.2008.05.012 Gascuel, 2009, EcoTroph (ET): a trophic level based software for assessing the impacts of fishing on aquatic ecosystems, Fish. Cent. Res. Rep., 17, 82 Gascuel, 2011, The trophic-level-based ecosystem modelling approach: theoretical overview and practical uses, ICES J. Mar. Sci., 68, 1403, 10.1093/icesjms/fsr062 Hattab, 2013, An ecosystem model of an exploited southern Mediterranean shelf region (Gulf of Gabes, Tunisia) and a comparison with other Mediterranean ecosystem model properties, J. Mar. Syst., 128, 159, 10.1016/j.jmarsys.2013.04.017 Lassalle, 2012, An ecosystem approach for the assessment of fisheries impacts on marine top predators: the Bay of Biscay case study, ICES J. Mar. Sci., 69, 925, 10.1093/icesjms/fss049 Libralato, 2008, Novel index for quantification of ecosystem effects of fishing as removal of secondary production, Mar. Ecol. Prog. Ser., 355, 107, 10.3354/meps07224 Lindeman, 1942, The trophic–dynamic aspect of ecology, Ecology, 23, 399, 10.2307/1930126 Lotze, 2011, Historical changes in marine resources, food-web structure and ecosystem functioning in the Adriatic Sea, Mediterranean, Ecosystems, 14, 198, 10.1007/s10021-010-9404-8 Maynou, 2011, Estimating trends of population decline in long-lived marine species in the Mediterranean Sea based on fishers' perceptions, PLoS ONE, 6, e21818, 10.1371/journal.pone.0021818 Odum, 1975, Detritus-based food web of an estuarine mangrove community, Estuar. Res., 265 Palomera, 2007, Small pelagic fish in the NW Mediterranean Sea: an ecological review, Prog. Oceanogr., 74, 377, 10.1016/j.pocean.2007.04.012 Papaconstantinou, 2000, Fisheries in the Mediterranean, Mediterr. Mar. Sci., 1, 5, 10.12681/mms.2 Pauly, 2005, Background and interpretation of the “Marine Trophic Index” as a measure of biodiversity, Philos. Trans. R. Soc. B Biol. Sci., 360, 415, 10.1098/rstb.2004.1597 Pauly, 1998, Fishing down marine food webs, Science, 279, 860, 10.1126/science.279.5352.860 Pauly, 2002, Towards sustainability in world fisheries, Nature, 418, 689, 10.1038/nature01017 Piroddi, 2011, From common to rare: the case of the Mediterranean common dolphin, Biol. Conserv., 144, 2490, 10.1016/j.biocon.2011.07.003 Pitcher, 2013, Fisheries: hope or despair?, Mar. Pollut. Bull., 74, 506, 10.1016/j.marpolbul.2013.05.045 Rombouts, 2013, Food web indicators under the Marine Strategy Framework Directive: from complexity to simplicity?, Ecol. Indic., 29, 246, 10.1016/j.ecolind.2012.12.021 Shin, 2001, Exploring fish community dynamics through size-dependent trophic interactions using a spatialized individual-based model, Aquat. Living Resour., 14, 65, 10.1016/S0990-7440(01)01106-8 Shin, 2004, Using an individual-based model of fish assemblages to study the response of size spectra to changes in fishing, Can. J. Fish. Aquat. Sci., 61, 414, 10.1139/f03-154 Tortonese, 1985, Distribution and ecology of endemic elements in the Mediterranean fauna (fishes and echinoderms), 57 Travers, 2010, Spatio-temporal variability in fish-induced predation mortality on plankton: a simulation approach using a coupled trophic model of the Benguela ecosystem, Prog. Oceanogr., 84, 118, 10.1016/j.pocean.2009.09.014 Tsagarakis, 2010, Food-web traits of the North Aegean Sea ecosystem (Eastern Mediterranean) and comparison with other Mediterranean ecosystems, Estuar. Coast. Shelf Sci., 88, 233, 10.1016/j.ecss.2010.04.007 Walters, 1999, Ecospace: prediction of mesoscale spatial patterns in trophic relationships of exploited ecosystems, with emphasis on the impacts of marine protected areas, Ecosystems, 2, 539, 10.1007/s100219900101 Worm, 2009, Rebuilding global fisheries, Science, 325, 578, 10.1126/science.1173146