Evidence of strong population bottleneck in genetics of endangered Brazilian Merganser (Mergus octosetaceus)

Journal of Ornithology - Tập 161 Số 2 - Trang 521-527 - 2020
Thais Augusta Maia1, Davidson P. Campos2, L. R. Silva2, Lívia Vanucci Lins3, Felipe Ribeiro3, Fabiane Sebaio4, Francisca Rodrigues2, Giovana Dantas1
1Programa de Pós-Graduação em Biologia de Vertebrados, PUC Minas, Belo Horizonte, Brazil
2Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
3Instituto Terra Brasilis, Belo Horizonte, Brazil
4Cervivo-Associação Cerrado Vivo, Patrocínio, Brazil

Tóm tắt

Từ khóa


Tài liệu tham khảo

Arden SL, Lambert DM (1997) Is the black Robin in genetic peril? Mol Ecol 6:21–28

Barbosa MO, Almeida ML (2010) Novas observações e dados reprodutivos do pato-mergulhão Mergus octosetaceus na região do Jalapão, Tocantins, Brasil. Cotinga 32:40–45

Bartmann W (1988) New observations on the Brazilian Merganser. Wildfowl 39:7–14

Bianchi CA, Brant S, Brandão RA, Brito BF (2005) New records of Brazilian Merganser Mergus octosetaceus in the rio das Pedras, Chapada dos Veadeiros, Brazil. Cotinga 24:72–74

BirdLife International (2016) Mergus octosetaceus. The IUCN red list of threatened species 2016: e.T22680482A92863947. Accessed 07 June 2017.

Braz V, Abreu TLS, Lopes LE, Leite LO, França FGR, Vasconcellos MM, Balbino SF (2003) Brazilian Merganser Mergus octosetaceus discovered in Jalapão State Park, Tocantins, Brazil. Cotinga 20:68–71

Bristol RM, Tucker R, Dawson DA, Horsbugh G, Jones RP, Frantz AC, Krupa A, Shah NJ, Burke T, Groombridfe JJ (2013) Comparison of historical bottleneck effects and genetic consequences of re-introduction in a critically endangered island passerine. Mol Ecol 22:4644–4662

Clark WS, Witt CC (2006) First known specimen of a hybrid Buteo: Swainson’s Hawk (Buteo swainsoni) Rough-legged Hawk (B. Lagopus) from Louisiana. Wilson J Ornithol 118:42–52

Dantas GPM, Meyer D, Godinho R, Ferrand N, Morgante JS (2012) Genetic variability in mitochondrial and nuclear genes of Larus dominicanus (Charadriiformes, Laridae) from the Brazilian coast. Genet Mol Biol 35:874–885

Earl D, Vondholdt B (2012) STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method. Cons Genet Res 4:359–361

Frankham R, Ballou JD, Bricoe DA (2008) Introduction to conservation genetic. Cambridge University Press, Cambridge

Frankham R (2002) Population viability analysis. Nature 419:18–19

Funk WC, Forsman ED, Johnson M, Mullins TD, Haig SM (2010) Evidence for recent population bottlenecks in northern spotted owls (Strix occidentalis caurina) Conserv Genet 11:1013–1021

Gandolfi A, Crestanello B, Fagotti A, Simoncelli F, Chiesa S, Girardi M, Giovagnoli E, Marongoni C, Di Roza I, Lucentini L (2017) New evidences of mitochondrial DNA heteroplasmy by putative paternal leakage between the rock partridge (Alectoris graeca) and the Chukar Partridge (Alectoris chukar). PLoS ONE 12(1):e0170507. https://doi.org/10.1371/journal.pone.0170507

Goossens BT, Chikhi L, Ancrenaz M, Lackman-Ancrenaz I, Andau P, Bruford MW (2006) Genetic signature of anthropogenic population collapse in Orangutans. PLoS Biol 4:e25

Grativol AD, Ballou JD, Fleischer RC (2001) Microsatellite variation within and among recently fragmented populations of the golden lion tamarin (Leontopithecus rosalia). Conserv Genet 2:1–9

Hefti-Gautschi B, Pfunder M, Jenni L, Keller V, Ellegren H (2009) Identification of conservation utits in the European Mergus merganser based on nuclear and mitochondrial DNA markers. Conserv Genet 10:87–99

Hogan SM, Gaggiotti OE, Bertorelle G (2012) The number of markers and samples needed for detecting bottlenecks under realistic scenarios, with and without recovery: a simulation-based study. Mol Ecol 22:3444–3450

Hughes B, Dugger B, Cunha H.J, Lamas I, Goerck J, Lins L, Silveira LF, Andrade R, Bruno SF, Rigueira S, Barros YM (2006) Action plan for the conservation of the Brazilian Merganser Mergus octosetaceus. Brasília: Ibama. (Threatened Species Series, 3).

IBAMA (2014) Ministério do Meio Ambiente. Portaria n.444, de 17 de dezembro de 2014. Lista Nacional Oficial de Espécies da Fauna Ameaçadas de Extinção Diário Oficial da União, Brasília, 18 de dez. P 122, 2014

Kocher TD, Thomas W, Meyer A, Edwards SV, Paabo S, VillaBlanca FX, Wilson AC (1989) Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proc Natl A Sci 86:6196–6200

Kou CH, Janzen FJ (2004) Genetic effects of a persistent bottleneck on a natural population of ornate box turtles (Terrapene ornata). Conserv Genet 5:425–437

Kuro-o M, Yonekawa H, Saito S, Eda M, Higuchi H, Koike H, Hasegawa H (2010) Unexpectedly high genetic diversity of mtDNA control region through severe bottleneck in vulnerable albatross Phoebastria albatrus. Conserv Genet 11:127–137

Kvist L, Martens J, Nazarenko AA, Orell M (2003) Paternal Leakage of Mitochondrial DNA in the Great Tit (Parus major). Mol Biol Evol 20:243–247

Lamas IR (2006) Census of Brazilian Merganser Mergus octosetaceus in the region of Serra da Canastra National Park, Brazil, with discussion of its threats and conservation. Bird Conserv Int 16:145–154

Librado P, Rozas J (2009) DnaSP v5: A software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25:1451–1452

Lins VL, Andrade DR, Ribeiro F, Rigueira ES (2011) Distribuição e biologia reprodutiva do pato-mergulhão (Mergus octosetaceus) na região da serra da Canastra. Minas Gerais, MG BIOTA, Belo Horizonte

Lougheed SC, Freeland JR, Handford P, Boag PT (2000) A molecular phylogeny of Warbling-Finches (Poospiza): paraphyly in a Neotropical Emberizid genus. Mol Phylogenet Evol 17:367–378

Luikart G, Allendorf FW, Cournuet J-M, Shewing WB (1998) Distortion of allele frequency distributions provides a test for recent population bottlenecks. J Hered 89:238–247

Maak S, Neumann K, Von Lengerker G, Gattermann R (2000) First seven microsatellites developed for the Peking duck (Anas platyrhynchos). Anim Genet 31:233

Maia TA, Vilaça ST, Silva LR, Santos FR, Dantas GPM (2017) DNA sampling from eggshells and microsatellite genotyping in rare tropical birds: case study on Brazilian Merganser. Genet Mol Biol 40:808–812

Muñoz-Fuente V, Gyllenstrand N, Negro JJ, Green AJ, Sorenson M (2006) Population structure and loss of genetic diversity in the endangered white-headed duck, Oxyura leucocephal. Conserv Genet 6:999–1015

Paithankar KR, Prasad KSN (1991) Precipitation of DNA by polyethylene glycol and ethanol. Nucleic Acids Res 19:1346

Peakall R, Smouse PE (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 6:288–295

Pritchard JK, Stephens M, Donnely P (2000) Inference of population structure using multilocus genotype data. Genetics 15:945–959

Sambrook J, Russell DW (2001) Molecular cloning: a laboratory manual, 3rd edn. CSHL press, New York

Silveira LF, Bartmann W (2001) Natural history and conservation of the Brazilian merganser Mergus octosetaceus at Serra da Canastra National Park, Minas Gerais, Brazil. Bird Conserv Int 11:287–300

Solovyeva D, Pearce J (2011) Comparative mitochondrial genetics of North American and Eurasian merganser with an emphasis on the endangered scaly-sided merganser (Mergus squamatus). Conserv Genet 12:839–844

Van Oosterhout C, Hutchinson WF, Wills D, Shipley P (2004) Micro-checker: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4:535–538

Vilaça ST, Redondo RAF, Lins LV, Santos FR (2012) Remaining genetic diversity in Brazilian Merganser (Mergus octosetaceus). Conserv Genet 13:293–298

Yamashita C, Valle MP (1990) Ocorrência de duas aves raras no Brasil Central: Mergus octosetaceus e Tigrisoma fasciatum fasciatum. Ararajuba 1:107–109

Zhang D-X, Hewitt GM (1996) Nuclear integrations: challenges for mitochondrial DNA markers. Tree 11:247–251

Zink RM, Barrowclough GF (2008) Mitochondrial DNA under siege in avian phylogeography. Mol Ecol 17:2107–2121