Evaluation of the analytical performance of the new Abbott RealTime RT-PCRs for the quantitative detection of HCV and HIV-1 RNA

Journal of Clinical Virology - Tập 40 - Trang 99-104 - 2007
M. Schutten1, E. Fries1, C. Burghoorn-Maas1, H.G.M. Niesters1
1Erasmus MC, Department of Virology, s-Gravendijkwal 230, 3015 CE Rotterdam, The Netherlands

Tài liệu tham khảo

Abbott, 1988, Enzymatic gene amplification: qualitative and quantitative methods for detecting proviral DNA amplified in vitro, J Infect Dis, 158, 1158, 10.1093/infdis/158.6.1158 Compton, 1991, Nucleic acid sequence-based amplification, Nature, 350, 91, 10.1038/350091a0 de Baar, 2001, Single rapid RealTime monitored isothermal RNA amplification assay for quantification of human immunodeficiency virus type 1 isolates from groups M, N, and O, J Clin Microbiol, 39, 1378, 10.1128/JCM.39.4.1378-1384.2001 Dewar, 1994, Application of branched DNA signal amplification to monitor human immunodeficiency virus type 1 burden in human plasma, J Infect Dis, 170, 1172, 10.1093/infdis/170.5.1172 European guidelines for the clinical management and treatment of HIV-infected adults in Europe. AIDS 2003;17 Suppl 2:S3-26. Garcia-Diaz, 2006, Comparative evaluation of the performance of the Abbott RealTime human immunodeficiency virus type 1 (HIV-1) assay for measurement of HIV-1 plasma viral load following automated specimen preparation, J Clin Microbiol, 44, 1788, 10.1128/JCM.44.5.1788-1791.2006 Gavier, 1997, Viremia after one month of interferon therapy predicts treatment outcome in patients with chronic hepatitis C, Gastroenterology, 113, 1647, 10.1053/gast.1997.v113.pm9352868 Hammer, 2006, Treatment for adult HIV infection: 2006 recommendations of the International AIDS Society, USA panel, Top HIV Med, 14, 827 Heid, 1996, RealTime quantitative PCR, Genome Res, 6, 986, 10.1101/gr.6.10.986 Holmes HC, Davis CL, Heath AB. Report of an international collaborative study to evaluate a WHO HIV-1 RNA genotype reference panel 2003. World Health Organization. http://www.who.int/bloodproducts/cs/031961.pdf accessed 7 Mar. 2007. Holmes HC, Davis CL, Heath AB. Report of an international collaborative study to establish a replacement WHO international standard for HIV-1 RNA NAT assays 2005. World Health Organization. http://www.who.int/bloodproducts/cs/052021.pdf accessed 7 Mar. 2007. Hong, 2004, Quantitative RealTime PCR with automated sample preparation for diagnosis and monitoring of cytomegalovirus infection in bone marrow transplant patients, Clin Chem, 50, 846, 10.1373/clinchem.2003.026484 Kievits, 1991, NASBA isothermal enzymatic in vitro nucleic acid amplification optimized for the diagnosis of HIV-1 infection, J Virol Methods, 35, 273, 10.1016/0166-0934(91)90069-C Lau, 1993, Significance of serum hepatitis C virus RNA levels in chronic hepatitis C, Lancet, 341, 1501, 10.1016/0140-6736(93)90635-T Menzo, 1992, Absolute quantitation of viremia in human immunodeficiency virus infection by competitive reverse transcription and polymerase chain reaction, J Clin Microbiol, 30, 1752, 10.1128/JCM.30.7.1752-1757.1992 Murphy, 2000, Multicenter comparison of Roche COBAS AMPLICOR MONITOR version 1.5, Organon Teknika NucliSens QT with Extractor, and Bayer Quantiplex version 30 for quantification of human immunodeficiency virus type 1 RNA in plasma, J Clin Microbiol, 38, 4034, 10.1128/JCM.38.11.4034-4041.2000 Ross, 2002, Quantitation of hepatitis C virus RNA by third generation branched DNA-based signal amplification assay, J Virol Methods, 101, 159, 10.1016/S0166-0934(01)00433-5 Sabato MF, Shiffman ML, Langley MR, Wilkinson DS, Ferreira-Gonzalez A. Comparison of the performance characteristics of three RealTime RT-PCR test, systems for detection and quantification of hepatitis C virus. J Clin Microbiol 2007. Saldanha J, Heath AB, Aberham C, Albrecht J, Gentili G, Gessner M, Pisani G. WHO collaborative study to establish a replacement WHO international standard for HCV RNA NAT assays 2003. World Health Organization. http://www.who.int/bloodproducts/cs/031958.pdf accessed 7 March 2007. Schutten, 2001, Clinical utility of viral quantification as a tool for disease monitoring, Expert Rev Mol Diagn, 1, 153, 10.1586/14737159.1.2.153 Swanson, 2006, Performance of the automated Abbott RealTime HIV-1 assay on a genetically diverse panel of specimens from Brazil, J Virol Methods, 134, 237, 10.1016/j.jviromet.2006.01.012 Tong, 1997, Prediction of response during interferon alfa 2b therapy in chronic hepatitis C patients using viral and biochemical characteristics: a comparison, Hepatology, 26, 1640, 10.1002/hep.510260637