Evaluation of self-sustaining cyanobacterial biofilms for technical applications

Biofilm - Tập 4 - Trang 100073 - 2022
Mahir Bozan1, Andreas Schmid1, Katja Bühler1
1Department of Solar Materials, Helmholtz-Centre for Environmental Research (UFZ), Permoserstrasse 15, 04318, Leipzig, Germany

Tài liệu tham khảo

Angermayr, 2015, Metabolic engineering of cyanobacteria for the synthesis of commodity products, Trends Biotechnol, 33, 352, 10.1016/j.tibtech.2015.03.009 Gharaie Fathabad, 2019, Augmenting Fremyella diplosiphon cellular lipid content and unsaturated fatty acid methyl esters via sterol desaturase gene overexpression, Appl Biochem Biotechnol, 189, 1127, 10.1007/s12010-019-03055-5 Jones, 2012, Algae biofuels: versatility for the future of bioenergy, Curr Opin Biotechnol, 23, 346, 10.1016/j.copbio.2011.10.013 Garlapati, 2019, Role of cyanobacteria in agricultural and industrial sectors: an outlook on economically important byproducts, Appl Microbiol Biotechnol, 103, 4709, 10.1007/s00253-019-09811-1 Posten, 2009, Design principles of photo-bioreactors for cultivation of microalgae, Eng Life Sci, 9, 165, 10.1002/elsc.200900003 Hoschek, 2019, Mixed-species biofilms for high-cell-density application of Synechocystis sp. PCC 6803 in capillary reactors for continuous cyclohexane oxidation to cyclohexanol, Bioresour Technol, 282, 171, 10.1016/j.biortech.2019.02.093 Flemming, 2010, The biofilm matrix, Nat Rev Microbiol, 8, 623, 10.1038/nrmicro2415 Halan, 2012, Biofilms as living catalysts in continuous chemical syntheses, Trends Biotechnol, 30, 453, 10.1016/j.tibtech.2012.05.003 Bolhuis, 2014, Molecular ecology of microbial mats, FEMS Microbiol Ecol, 90, 335 Bharti, 2017, Phototrophic biofilms: diversity, ecology and applications, J Appl Phycol, 29, 2729, 10.1007/s10811-017-1172-9 Gaysina, 2019, Cyanobacteria in diverse habitats, 1 Di Pippo, 2013, Characterization of exopolysaccharides produced by seven biofilm-forming cyanobacterial strains for biotechnological applications, J Appl Phycol, 25, 1697, 10.1007/s10811-013-0028-1 Buglioni, 2022, Technological innovations in photochemistry for organic synthesis: flow chemistry, high-throughput experimentation, scale-up, and photoelectrochemistry, Chem Rev, 122, 2752, 10.1021/acs.chemrev.1c00332 Heuschkel, 2020, The impact of glass material on growth and biocatalytic performance of mixed-species biofilms in capillary reactors for continuous cyclohexanol production, Front Bioeng Biotechnol, 8, 1, 10.3389/fbioe.2020.588729 Rippka, 1979, Generic assignments, strain histories and properties of pure cultures of cyanobacteria, Microbiology, 111, 1, 10.1099/00221287-111-1-1 Min, 2010, Hydrogen production by the unicellular, diazotrophic cyanobacterium Cyanothece sp. strain ATCC 51142 under conditions of continuous light, Appl Environ Microbiol, 76, 4293, 10.1128/AEM.00146-10 Christman, 2011, Global transcription profiles of the nitrogen stress response resulting in heterocyst or hormogonium development in Nostoc punctiforme, J Bacteriol, 193, 6874, 10.1128/JB.05999-11 Meeks, 2002, Cellular differentiation in the cyanobacterium Nostoc punctiforme, Arch Microbiol, 178, 395, 10.1007/s00203-002-0476-5 Velu, 2020, Bioproduct potential of outdoor cultures of Tolypothrix sp.: effect of carbon dioxide and metal-rich wastewater, Front Bioeng Biotechnol, 8, 1, 10.3389/fbioe.2020.00051 Schipper, 2020, Production of phycocyanin by Leptolyngbya sp. in desert environments, Algal Res, 47, 101875, 10.1016/j.algal.2020.101875 Yu, 2015, Synechococcus elongatus UTEX 2973, a fast growing cyanobacterial chassis for biosynthesis using light and CO₂, Sci Rep, 5, 8132, 10.1038/srep08132 Zavřel, 2015, Measurement of chlorophyll a and carotenoids concentration in cyanobacteria, Bio-Protocol, 5, 1, 10.21769/BioProtoc.1467 Mota, 2020, Cyanoflan: a cyanobacterial sulfated carbohydrate polymer with emulsifying properties, Carbohydr Polym, 229, 115525, 10.1016/j.carbpol.2019.115525 Niu, 2013, LuxS influences Escherichia coli biofilm formation through autoinducer-2-dependent and autoinducer-2-independent modalities, FEMS Microbiol Ecol, 83, 778, 10.1111/1574-6941.12034 Summerfield, 2008, Global transcriptional response of the alkali-tolerant cyanobacterium Synechocystis sp. strain PCC 6803 to a pH 10 environment, Appl Environ Microbiol, 74, 5276, 10.1128/AEM.00883-08 Fahey, 2013, Glutathione analogs in prokaryotes, Biochim Biophys Acta, 1830, 3182, 10.1016/j.bbagen.2012.10.006 De Philippis, 1998, Exocellular polysaccharides from cyanobacteria and their possible applications, FEMS Microbiol Rev, 22, 151, 10.1016/S0168-6445(98)00012-6 Jittawuttipoka, 2013, Multidisciplinary evidences that Synechocystis PCC6803 exopolysaccharides operate in cell sedimentation and protection against salt and metal stresses, PLoS One, 8, 10.1371/journal.pone.0055564 Ni, 2011, Soluble microbial products and their implications in mixed culture biotechnology, Trends Biotechnol, 29, 454, 10.1016/j.tibtech.2011.04.006 Nguyen, 2016, Electron partitioning in soluble organic products by wild-type and modified Synechocystis sp. PCC 6803, Biomass Bioenergy, 90, 237, 10.1016/j.biombioe.2016.04.016 López-Igual, 2012, A major facilitator superfamily protein, HepP, is involved in formation of the heterocyst envelope polysaccharide in the cyanobacterium Anabaena sp. strain PCC 7120, J Bacteriol, 194, 4677, 10.1128/JB.00489-12 Pereira, 2015, Phylum-wide analysis of genes/proteins related to the last steps of assembly and export of extracellular polymeric substances (EPS) in cyanobacteria, Sci Rep, 5, 14835, 10.1038/srep14835 Böhme, 1998, Regulation of nitrogen fixation in heterocyst-forming cyanobacteria, Trends Plant Sci, 3, 346, 10.1016/S1360-1385(98)01290-4 Puggioni, 2016, Distribution of hydrogenases in cyanobacteria: a phylum-wide genomic survey, Front Genet, 7, 1, 10.3389/fgene.2016.00223 Yoshino, 2007, High photobiological hydrogen production activity of a Nostoc sp. PCC 7422 uptake hydrogenase-deficient mutant with high nitrogenase activity, Mar Biotechnol, 9, 101, 10.1007/s10126-006-6035-3 Hunsucker, 2004, A preliminary investigation of the Nostoc punctiforme proteome, Biochem Biophys Res Commun, 317, 1121, 10.1016/j.bbrc.2004.03.173 Vilhauer, 2014, The exo-proteome and exo-metabolome of Nostoc punctiforme (Cyanobacteria) in the presence and absence of nitrate, Arch Microbiol, 196, 357, 10.1007/s00203-014-0974-2 Zhang, X., Sherman, D.M., Shermana, L.A., 2014. The uptake hydrogenase in the unicellular diazotrophic cyanobacterium Cyanothece sp. strain PCC 7822 protects nitrogenase from oxygen toxicity. J Bacteriol 2014;196:840–849. doi:10.1128/JB.01248-13. Kopf, 2014, Comparative genome analysis of the closely related Synechocystis strains PCC 6714 and PCC 6803, DNA Res, 21, 255, 10.1093/dnares/dst055 Jaiswal, 2018, Genome features and biochemical characteristics of a robust, fast growing and naturally transformable cyanobacterium Synechococcus elongatus PCC 11801 isolated from India, Sci Rep, 8, 1, 10.1038/s41598-018-34872-z Tan, 2018, The primary transcriptome of the fast-growing cyanobacterium Synechococcus elongatus UTEX 2973, Biotechnol Biofuels, 11, 1, 10.1186/s13068-018-1215-8