Epigenetic clock analysis of diet, exercise, education, and lifestyle factors
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Freund, 2012, The health benefits of dietary fiber: beyond the usual suspects of type 2 diabetes mellitus, cardiovascular disease and colon cancer., Metabolism, 6, 1058, 10.1016/j.metabol.2012.01.017
Appel, 2002, Fish consumption, fish oil, omega-3 fatty acids, and cardiovascular disease., Circulation, 10, 2747, 10.1161/01.CIR.0000038493.65177.94
Kok, 2000, Fruits and vegetables in the prevention of cancer and cardiovascular disease., Public Health Nutr, 3, 103, 10.1017/S1368980000000136
Esposito, 2006, The effects of diet on inflammation: emphasis on the metabolic syndrome., J Am Coll Cardiol, 4, 677, 10.1016/j.jacc.2006.03.052
Mozaffarian. Dietary and Policy Priorities for Cardiovascular Disease, Diabetes, and Obesity. 2016; 133:187–225.
Smith, 2009, Harmonizing the metabolic syndrome: a joint interim statement of the International Diabetes Federation Task Force on Epidemiology and Prevention; National Heart, Lung, and Blood Institute; American Heart Association; World Heart Federation; International Atherosclerosis Society; and International Association for the Study of Obesity., Circulation, 12, 1640, 10.1161/CIRCULATIONAHA.109.192644
Costa, 2005, Diagnosis and management of the metabolic syndrome: an American Heart Association/National Heart, Lung, and Blood Institute Scientific Statement., Circulation, 11, 2735, 10.1161/CIRCULATIONAHA.105.169404
Meigs, 2005, Metabolic syndrome as a precursor of cardiovascular disease and type 2 diabetes mellitus., Circulation, 11, 3066, 10.1161/CIRCULATIONAHA.105.539528
Doll, 1997, Alcohol consumption and mortality among middle-aged and elderly U.S. adults., N Engl J Med, 33, 1705, 10.1056/NEJM199712113372401
Stampfer, 1999, Moderate alcohol intake and lower risk of coronary heart disease: meta-analysis of effects on lipids and haemostatic factors., BMJ, 31, 1523, 10.1136/bmj.319.7224.1523
Bredin, 2006, Health benefits of physical activity: the evidence., CMAJ, 17, 801, 10.1503/cmaj.051351
Calero, 1998, Relationship between socioeconomic status and ischaemic heart disease in cohort and case-control studies: 1960-1993., Int J Epidemiol, 2, 350, 10.1093/ije/27.3.350
Osler, 2010, Does educational status impact adult mortality in Denmark? A twin approach., Am J Epidemiol, 17, 225, 10.1093/aje/kwq072
Currie J. Healthy, Wealthy, and Wise: Socioeconomic Status, Poor Health in Childhood, and Human Capital Development. National Bureau of Economic Research Working Paper Series. 2008; No. 13987.
Lleras-Muney, 2010, Understanding differences in health behaviors by education., J Health Econ, 2, 1, 10.1016/j.jhealeco.2009.10.003
Savage, 2009, The association between leukocyte telomere length and cigarette smoking, dietary and physical variables, and risk of prostate cancer., Aging Cell, 8, 405, 10.1111/j.1474-9726.2009.00485.x
Paolisso, 2013, Mediterranean diet, telomere maintenance and health status among elderly., PLoS One, 8, e62781, 10.1371/journal.pone.0062781
Marti, 2014, Longitudinal association of telomere length and obesity indices in an intervention study with a Mediterranean diet: the PREDIMED-NAVARRA trial., Int J Obes, 3, 177, 10.1038/ijo.2013.68
Samani, 2007, Telomere length, risk of coronary heart disease, and statin treatment in the West of Scotland Primary Prevention Study: a nested case-control study., Lancet, 36, 107, 10.1016/S0140-6736(07)60071-3
Blackburn, 2013, Omega-3 fatty acids, oxidative stress, and leukocyte telomere length: A randomized controlled trial., Brain Behav Immun, 2, 16, 10.1016/j.bbi.2012.09.004
Rimm, 2010, Associations between diet, lifestyle factors, and telomere length in women., Am J Clin Nutr, 9, 1273, 10.3945/ajcn.2009.28947
King, 2016, The Influence of Alcohol Consumption, Cigarette Smoking, and Physical Activity on Leukocyte Telomere Length., Cancer Epidemiol Biomarkers Prev, 2, 374, 10.1158/1055-9965.EPI-14-1364
Aviv, 2008, The association between physical activity in leisure time and leukocyte telomere length., Arch Intern Med, 16, 154, 10.1001/archinternmed.2007.39
Epel, 2013, Educational attainment and late life telomere length in the Health, Aging and Body Composition Study., Brain Behav Immun, 2, 15, 10.1016/j.bbi.2012.08.014
Kelsey, 2009, Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context., PLoS Genet, 5, e1000602, 10.1371/journal.pgen.1000602
Baccarelli, 2009, Decline in genomic DNA methylation through aging in a cohort of elderly subjects., Mech Ageing Dev, 13, 234, 10.1016/j.mad.2008.12.003
Spector, 2010, Human aging-associated DNA hypermethylation occurs preferentially at bivalent chromatin domains., Genome Res, 2, 434, 10.1101/gr.103101.109
Marth, 2010, Age-dependent DNA methylation of genes that are suppressed in stem cells is a hallmark of cancer., Genome Res, 2, 440, 10.1101/gr.103606.109
Ophoff, 2012, Aging effects on DNA methylation modules in human brain and blood tissue., Genome Biol, 1, R97, 10.1186/gb-2012-13-10-r97
Lipska, 2012, DNA methylation signatures in development and aging of the human prefrontal cortex., Am J Hum Genet, 9, 260, 10.1016/j.ajhg.2011.12.020
Warren, 2012, Age-associated DNA methylation in pediatric populations., Genome Res, 2, 623, 10.1101/gr.125187.111
Gyllensten, 2013, Continuous Aging of the Human DNA Methylome Throughout the Human Lifespan., PLoS One, 8, e67378, 10.1371/journal.pone.0067378
Absher, 2013, Differential DNA methylation with age displays both common and dynamic features across human tissues that are influenced by CpG landscape., Genome Biol, 1, R102, 10.1186/gb-2013-14-9-r102
Capri, 2012, Methylation of ELOVL2 gene as a new epigenetic marker of age., Aging Cell, 1, 1132, 10.1111/acel.12005
Rajapakse, 2013, Genome-wide methylation profiles reveal quantitative views of human aging rates., Mol Cell, 4, 359, 10.1016/j.molcel.2012.10.016
Horvath, 2013, DNA methylation age of human tissues and cell types., Genome Biol, 1, R115, 10.1186/gb-2013-14-10-r115
Wagner, 2016, DNA methylation levels at individual age-associated CpG sites can be indicative for life expectancy., Aging (Albany NY), 8, 394, 10.18632/aging.100908
Murphy, 2015, DNA methylation age of blood predicts all-cause mortality in later life., Genome Biol, 1, 25, 10.1186/s13059-015-0584-6
Christensen, 2015, DNA methylation age is associated with mortality in a longitudinal Danish twin study., Aging Cell
Brenner, 2016, Epigenetic age acceleration predicts cancer, cardiovascular, and all-cause mortality in a German case cohort., Clin Epigenetics, 8, 64, 10.1186/s13148-016-0228-z
Studenski, 2016, DNA methylation-based measures of biological age: meta-analysis predicting time to death., Aging (Albany NY), 8, 1844
Brenner, 2016, Frailty is associated with the epigenetic clock but not with telomere length in a German cohort., Clin Epigenetics, 8, 21, 10.1186/s13148-016-0186-5
Horvath, 2015, DNA methylation age of blood predicts future onset of lung cancer in the women’s health initiative., Aging (Albany NY), 7, 690, 10.18632/aging.100809
Murphy, 2015, The epigenetic clock is correlated with physical and cognitive fitness in the Lothian Birth Cohort 1936., Int J Epidemiol, 4, 1388, 10.1093/ije/dyu277
Giuliani, 2015, Decreased epigenetic age of PBMCs from Italian semi-supercentenarians and their offspring., Aging (Albany NY), 7, 1159, 10.18632/aging.100861
Horvath, 2015, Epigenetic age of the pre-frontal cortex is associated with neuritic plaques, amyloid load, and Alzheimer’s disease related cognitive functioning., Aging (Albany NY), 7, 1198, 10.18632/aging.100864
Coles, 2015, The cerebellum ages slowly according to the epigenetic clock., Aging (Albany NY), 7, 294, 10.18632/aging.100742
Horvath, 2015, Epigenetic age analysis of children who seem to evade aging., Aging (Albany NY), 7, 334, 10.18632/aging.100744
Franceschi, 2015, Accelerated epigenetic aging in Down syndrome., Aging Cell, 1, 491, 10.1111/acel.12325
Levine, 2015, HIV-1 infection accelerates age according to the epigenetic clock., J Infect Dis, 21, 1563, 10.1093/infdis/jiv277
Vinters, 2016, Huntington’s disease accelerates epigenetic aging of human brain and disrupts DNA methylation levels., Aging (Albany NY), 8, 1485, 10.18632/aging.101005
Sipos, 2014, Obesity accelerates epigenetic aging of human liver., Proc Natl Acad Sci USA, 11, 15538, 10.1073/pnas.1412759111
Brückl, 2015, Lifetime stress accelerates epigenetic aging in an urban, African American cohort: relevance of glucocorticoid signaling., Genome Biol, 1, 266, 10.1186/s13059-015-0828-5
Wong, 2016, Menopause accelerates biological aging., Proc Natl Acad Sci USA, 11, 9327, 10.1073/pnas.1604558113
Gonzalez, 2016, Specific increase of methylation age in osteoarthritis cartilage., Osteoarthritis Cartilage, 2, S63, 10.1016/j.joca.2016.01.140
Ritz, 2015, Increased epigenetic age and granulocyte counts in the blood of Parkinson’s disease patients., Aging (Albany NY), 7, 1130, 10.18632/aging.100859
Li, 2016, An epigenetic clock analysis of race/ethnicity, sex, and coronary heart disease., Genome Biol, 1, 171, 10.1186/s13059-016-1030-0
McGuire S. US Department of Agriculture and US Department of Health and Human Services, Dietary Guidelines for Americans, 2010. Washington, DC: US Government Printing Office, January 2011. Advances in Nutrition: An International Review Journal. 2011; 2(3):293-294.
Committee DGA. Scientific Report of the 2015 Dietary Guidelines Advisory Committee. Washington (DC): USDA and US Department of Health and Human Services. 2015.
Horvath, 2016, Genetic variants near MLST8 and DHX57 affect the epigenetic age of the cerebellum., Nat Commun, 7, 10561, 10.1038/ncomms10561
Soveral, 2014, The immune system and aging: a review., Gynecol Endocrinol, 3, 16, 10.3109/09513590.2013.852531
Finch, 2010, Evolution in health and medicine Sackler colloquium: Evolution of the human lifespan and diseases of aging: roles of infection, inflammation, and nutrition., Proc Natl Acad Sci USA, 10, 1718, 10.1073/pnas.0909606106
Franco, 2012, Association between fish consumption, long chain omega 3 fatty acids, and risk of cerebrovascular disease: systematic review and meta-analysis., BMJ, 34, e6698, 10.1136/bmj.e6698
Li, 2013, Intake of fish and marine n-3 polyunsaturated fatty acids and risk of breast cancer: meta-analysis of data from 21 independent prospective cohort studies., BMJ, 34, f3706, 10.1136/bmj.f3706
Tucker, 2011, Protective effects of fish intake and interactive effects of long-chain polyunsaturated fatty acid intakes on hip bone mineral density in older adults: the Framingham Osteoporosis Study., Am J Clin Nutr, 9, 1142, 10.3945/ajcn.110.005926
Serhan, 2005, Molecular circuits of resolution: formation and actions of resolvins and protectins., J Immunol, 17, 4345, 10.4049/jimmunol.174.7.4345
Rifai, 2003, C-reactive protein, the metabolic syndrome, and risk of incident cardiovascular events: an 8-year follow-up of 14 719 initially healthy American women., Circulation, 10, 391, 10.1161/01.CIR.0000055014.62083.05
Vokonas, 1992, Alcohol consumption and mortality in an American male population: recovering the U-shaped curve--findings from the normative Aging Study., J Stud Alcohol, 5, 25, 10.15288/jsa.1992.53.25
Biddulph, 2015, All cause mortality and the case for age specific alcohol consumption guidelines: pooled analyses of up to 10 population based cohorts., BMJ, 35, h384, 10.1136/bmj.h384
Philibert, 2015, Methylomic Aging as a Window onto the Influence of Lifestyle: Tobacco and Alcohol Use Alter the Rate of Biological Aging., J Am Geriatr Soc, 6, 2519, 10.1111/jgs.13830
Sørensen, 2000, Type of alcohol consumed and mortality from all causes, coronary heart disease, and cancer., Ann Intern Med, 13, 411, 10.7326/0003-4819-133-6-200009190-00008
Harris, 2004, Relationship of alcohol intake with inflammatory markers and plasminogen activator inhibitor-1 in well-functioning older adults: the Health, Aging, and Body Composition study., Circulation, 10, 607, 10.1161/01.CIR.0000109503.13955.00
Bostrom, 2006, Moderate alcohol use and reduced mortality risk: systematic error in prospective studies., Addict Res Theory, 1, 101, 10.1080/16066350500497983
Ghali, 2011, Effect of alcohol consumption on biological markers associated with risk of coronary heart disease: systematic review and meta-analysis of interventional studies., BMJ, 34, d636, 10.1136/bmj.d636
Dallongeville, 2006, Fruit and vegetable consumption and risk of coronary heart disease: a meta-analysis of cohort studies., J Nutr, 13, 2588
MacGregor, 2007, Increased consumption of fruit and vegetables is related to a reduced risk of coronary heart disease: meta-analysis of cohort studies., J Hum Hypertens, 2, 717, 10.1038/sj.jhh.1002212
MacGregor, 2006, Fruit and vegetable consumption and stroke: meta-analysis of cohort studies., Lancet, 36, 320, 10.1016/S0140-6736(06)68069-0
Davies, 2010, Fruit and vegetable intake and incidence of type 2 diabetes mellitus: systematic review and meta-analysis., BMJ, 34, c4229, 10.1136/bmj.c4229
Boyle, 2000, Meta-analysis of studies on breast cancer risk and diet: the role of fruit and vegetable consumption and the intake of associated micronutrients., Eur J Cancer, 3, 636, 10.1016/S0959-8049(00)00022-8
Hu, 2014, Fruit and vegetable consumption and mortality from all causes, cardiovascular disease, and cancer: systematic review and dose-response meta-analysis of prospective cohort studies., BMJ, 34, g4490, 10.1136/bmj.g4490
Sinaiko, 2009, Fruit and vegetable consumption and its relation to markers of inflammation and oxidative stress in adolescents., J Am Diet Assoc, 10, 414, 10.1016/j.jada.2008.11.036
Willett, 2006, Fruit and vegetable intakes, C-reactive protein, and the metabolic syndrome., Am J Clin Nutr, 8, 1489
Chainani-Wu, 2013, Effect of comprehensive lifestyle changes on telomerase activity and telomere length in men with biopsy-proven low-risk prostate cancer: 5-year follow-up of a descriptive pilot study., Lancet Oncol, 1, 1112, 10.1016/S1470-2045(13)70366-8
Whooley, 2010, Association of marine omega-3 fatty acid levels with telomeric aging in patients with coronary heart disease., JAMA, 30, 250, 10.1001/jama.2009.2008
Espeland, 2016, Metformin as a Tool to Target Aging., Cell Metab, 2, 1060, 10.1016/j.cmet.2016.05.011
Doubal, 2006, A new approach to the concept and computation of biological age., Mech Ageing Dev, 12, 240, 10.1016/j.mad.2005.10.004
The Women’s Health Initiative Study Group, 1998, Design of the Women’s Health Initiative clinical trial and observational study., Control Clin Trials, 1, 61, 10.1016/S0197-2456(97)00078-0
Agurs-Collins, 1999, Measurement characteristics of the Women’s Health Initiative food frequency questionnaire., Ann Epidemiol, 9, 178, 10.1016/S1047-2797(98)00055-6
Kelsey, 2012, DNA methylation arrays as surrogate measures of cell mixture distribution., BMC Bioinformatics, 1, 86, 10.1186/1471-2105-13-86
Li, 2016, An epigenetic clock analysis of race/ethnicity, sex, and coronary heart disease., Genome Biol, 1, 171, 10.1186/s13059-016-1030-0
Whitsel EA, Baccarelli A, Hou L. Epigenetic Mechanisms of PM-Mediated CVD. Research Portfo-lio Online Reporting Tools. National Institutes of Health: U.S. Department of Health and Human Services: https://projectreporter.nih.gov/project_info_description.cfm?aid=8369149&icde=27485446).
Rabinovic, 2007, Adjusting batch effects in microarray expression data using empirical Bayes methods., Biostatistics, 8, 118, 10.1093/biostatistics/kxj037
Berrino, 1997, Relative validity and reproducibility of a food frequency dietary questionnaire for use in the Italian EPIC centres., Int J Epidemiol, 2, S152, 10.1093/ije/26.suppl_1.S152
Ferrucci, 2006, Low nutrient intake is an essential component of frailty in older persons., J Gerontol A Biol Sci Med Sci, 6, 589, 10.1093/gerona/61.6.589