Environmental toxicology and omics: A question of sex

Journal of Proteomics - Tập 172 - Trang 152-164 - 2018
Xuefang Liang1,2, April Feswick3, Denina Simmons4, Christopher J. Martyniuk2
1School of Ecology and Environment, Inner Mongolia University, Hohhot 010021, China
2Department of Physiological Sciences and Center for Environmental and Human Toxicology, UF Genetics Institute, College of Veterinary Medicine, University of Florida, Gainesville, FL 32611, USA
3Department of Molecular Genetics and Microbiology, College of Medicine, University of Florida, Gainesville, FL, USA
4Department of Chemistry, McMaster University, Hamilton, Ontario, Canada.

Tài liệu tham khảo

Grimm, 2016, Alzheimer, mitochondria and gender, Neurosci. Biobehav. Rev., 67, 89, 10.1016/j.neubiorev.2016.04.012 Seeman, 2002, The role of sex hormones in psychopathology: focus on schizophrenia, Prim. Care, 29, 171, 10.1016/S0095-4543(03)00080-0 Regitz-Zagrosek, 2012, Sex and gender differences in clinical medicine, Handb. Exp. Pharmacol., 3 Rando, 2011 Hall, 2014, Sex differences in the genome-wide DNA methylation pattern and impact on gene expression, microRNA levels and insulin secretion in human pancreatic islets, Genome Biol., 15, 522, 10.1186/s13059-014-0522-z Shen, 2016, Factors affecting arsenic methylation in arsenic-exposed humans: a systematic review and meta-analysis, Int. J. Environ. Res. Public Health, 13, 205, 10.3390/ijerph13020205 Kippler, 2013, Sex-specific effects of early life cadmium exposure on DNA methylation and implications for birth weight, Epigenetics, 8, 494, 10.4161/epi.24401 Chatziioannou, 2017, Blood-based omic profiling supports female susceptibility to tobacco smoke-induced cardiovascular diseases, Sci Rep, 7, 42870, 10.1038/srep42870 Uhl, 2007, Females in clinical studies: where are we going?, Clin. Pharmacol. Ther., 81, 600 Geller, 2011, Inclusion, analysis, and reporting of sex and race/ethnicity in clinical trials: have we made progress?, J. Women's Health (Larchmt), 20, 315, 10.1089/jwh.2010.2469 Mennecozzi, 2015, Sex differences in liver toxicity-do female and male human primary hepatocytes react differently to toxicants in vitro?, PLoS One, 10, 10.1371/journal.pone.0122786 Kho, 2016, Age, sexual dimorphism, and disease associations in the developing human fetal lung transcriptome, Am. J. Respir. Cell Mol. Biol., 54, 814, 10.1165/rcmb.2015-0326OC Richardson, 2015, Opinion: focus on preclinical sex differences will not address women's and men's health disparities, Proc. Natl. Acad. Sci. U. S. A., 112, 13419, 10.1073/pnas.1516958112 Sumner, 2009, Metabolomics in the assessment of chemical-induced reproductive and developmental outcomes using non-invasive biological fluids: application to the study of butylbenzyl phthalate, J. Appl. Toxicol., 29, 703, 10.1002/jat.1462 Strauss, 2009, Influence of strain and sex on the metabolic profile of rats in repeated dose toxicological studies, Toxicol. Lett., 191, 88, 10.1016/j.toxlet.2009.08.004 Kanther, 2011, Microbial colonization induces dynamic temporal and spatial patterns of NF-kappaB activation in the zebrafish digestive tract, Gastroenterology, 141, 197, 10.1053/j.gastro.2011.03.042 2013 EU, 2013 Bahamonde, 2016, Defining the role of omics in assessing ecosystem health: perspectives from the Canadian environmental monitoring program, Environ. Toxicol. Chem., 35, 20, 10.1002/etc.3218 Sheng, 2015, Proteomic analysis of three gonad types of swamp eel reveals genes differentially expressed during sex reversal, Sci Rep, 5, 10.1038/srep10176 Bahamonde, 2013, Intersex in teleost fish: are we distinguishing endocrine disruption from natural phenomena?, Gen. Comp. Endocrinol., 192, 25, 10.1016/j.ygcen.2013.04.005 Matson, 2012, Sex and the singular DM domain: insights into sexual regulation, evolution and plasticity, Nat. Rev. Genet., 13, 163, 10.1038/nrg3161 Polanco, 2007, Sry and the hesitant beginnings of male development, Dev. Biol., 302, 13, 10.1016/j.ydbio.2006.08.049 Haqq, 1994, Molecular basis of mammalian sexual determination: activation of Mullerian inhibiting substance gene expression by SRY, Science, 266, 1494, 10.1126/science.7985018 Baron, 2007, Androgen-induced masculinization in rainbow trout results in a marked dysregulation of early gonadal gene expression profiles, BMC Genomics, 8, 10.1186/1471-2164-8-357 Fong, 2014, iTRAQ-based proteomic profiling of the marine medaka (Oryzias melastigma) gonad exposed to BDE-47, Mar. Pollut. Bull., 85, 471, 10.1016/j.marpolbul.2014.04.024 Keyvanshokooh, 2009, Comparative proteomics analysis of male and female Persian sturgeon (Acipenser persicus) gonads, Anim. Reprod. Sci., 111, 361, 10.1016/j.anireprosci.2008.03.005 Schalburg, 2005, A comprehensive survey of the genes involved in maturation and development of the rainbow trout ovary, Biol. Reprod., 72, 687, 10.1095/biolreprod.104.034967 Ji, 2016, An integrated proteomic and metabolomic study on the gender-specific responses of mussels Mytilus galloprovincialis to tetrabromobisphenol A (TBBPA), Chemosphere, 144, 527, 10.1016/j.chemosphere.2015.08.052 Ji, 2014, iTRAQ-based quantitative proteomic analyses on the gender-specific responses in mussel Mytilus galloprovincialis to tetrabromobisphenol A, Aquat. Toxicol., 157, 30, 10.1016/j.aquatox.2014.09.008 Viitaniemi, 2011, Sex-biased protein expression in Threespine Stickleback, Gasterosteus aculeatus, J. Proteome Res., 10, 4033, 10.1021/pr200234a Qiao, 2016, Deep sexual dimorphism in adult medaka fish liver highlighted by multi-omic approach, Sci Rep, 6, 10.1038/srep32459 Zupanc, 2014, Large-scale identification of proteins involved in the development of a sexually dimorphic behavior, J. Neurophysiol., 111, 1646, 10.1152/jn.00750.2013 Small, 2010, Gene expression analyses of hepatocellular adenoma and hepatocellular carcinoma from the marine flatfish Limanda limanda, Dis. Aquat. Org., 88, 127, 10.3354/dao02148 Chen, 2014, Proteomic changes in brain tissues of marine medaka (Oryzias melastigma) after chronic exposure to two antifouling compounds: butenolide and 4,5-dichloro-2-n-octy1-4-isothiazolin-3-one (DCOIT), Aquat. Toxicol., 157, 47, 10.1016/j.aquatox.2014.09.010 Chen, 2014, D.W. Au, P.Y. Qian, Comparative safety of the antifouling compound butenolide and 4,5-dichloro-2-n-octyl-4-isothiazolin-3-one (DCOIT) to the marine medaka (Oryzias melastigma), Aquat. Toxicol., 149, 116, 10.1016/j.aquatox.2014.01.023 Ribas, 2017, Inhibition of immune responses and related proteins in Rhamdia quelen exposed to diclofenac, Environ. Toxicol. Chem., 36, 2092, 10.1002/etc.3742 Liu, 2016, Sex-dependent effects of microcystin-LR on hypothalamic-pituitary-gonad axis and gametogenesis of adult zebrafish, Sci Rep, 6 Le Manach, 2016, Gender-Specific Toxicological Effects of Chronic Exposure to Pure Microcystin-LR or Complex Microcystis aeruginosa Extracts on Adult Medaka Fish, Environ. Sci. Technol., 50, 8324, 10.1021/acs.est.6b01903 Simmons, 2016, Plasma proteome profiles of White Sucker (Catostomus commersonii) from the Athabasca River within the oil sands deposit, Comp. Biochem. Physiol. Part D Genomics Proteomics, 19, 181, 10.1016/j.cbd.2016.03.003 Schauder, 2014, Structure of a lipid-bound extended synaptotagmin indicates a role in lipid transfer, Nature, 510, 552, 10.1038/nature13269 Sclip, 2016, Extended synaptotagmin (ESyt) triple knock-out mice are viable and fertile without obvious endoplasmic reticulum dysfunction, PLoS One, 11, 10.1371/journal.pone.0158295 Pirro, 2016, Lipid dynamics in zebrafish embryonic development observed by DESI-MS imaging and nanoelectrospray-MS, Mol. BioSyst., 12, 2069, 10.1039/C6MB00168H Lanes, 2013, Transcriptome of Atlantic cod (Gadus morhua L.) early embryos from farmed and wild broodstocks, Mar. Biotechnol., 15, 677, 10.1007/s10126-013-9527-y Shpargel, 2014, KDM6 Demethylase Independent Loss of Histone H3 Lysine 27 Trimethylation during Early Embryonic Development, PLoS Genet., 10, 10.1371/journal.pgen.1004507 NCBI, KDM6A lysine demethylase 6A [Homo sapiens (human)]. NCBI, KDM6B lysine demethylase 6B [Homo sapiens (human)]. Xiang, 2007, JMJD3 is a histone H3K27 demethylase, Cell Res., 17, 850, 10.1038/cr.2007.83 Berletch, 2013, Female bias in Rhox6 and 9 regulation by the histone demethylase KDM6A, PLoS Genet., 9, 10.1371/journal.pgen.1003489 Akerberg, 2017, Histone demethylases Kdm6ba and Kdm6bb redundantly promote cardiomyocyte proliferation during zebrafish heart ventricle maturation, Dev. Biol., 426, 84, 10.1016/j.ydbio.2017.03.030 Lindgren, 2013, Haploinsufficiency of KDM6A is associated with severe psychomotor retardation, global growth restriction, seizures and cleft palate, Hum. Genet., 132, 537, 10.1007/s00439-013-1263-x Miller, 2015, Using molecular biomarkers and traditional morphometric measurements to assess the health of slimy sculpin (Cottus cognatus) from streams with elevated selenium in North-Eastern British Columbia, Environ. Toxicol. Chem., 34, 2335, 10.1002/etc.3064 Santos, 2008, Sexually dimorphic gene expression in the brains of mature zebrafish, Comp. Biochem. Physiol. A Mol. Integr. Physiol., 149, 314, 10.1016/j.cbpa.2008.01.010 Ho, 1998, Reduced fertility in female mice lacking copper-zinc superoxide dismutase, J. Biol. Chem., 273, 7765, 10.1074/jbc.273.13.7765 Noda, 2012, Copper/zinc superoxide dismutase insufficiency impairs progesterone secretion and fertility in female mice, Biol. Reprod., 86, 10.1095/biolreprod.111.092999 Alvarez, 2017, Insights into the diversity of NOD-like receptors: identification and expression analysis of NLRC3, NLRC5 and NLRX1 in rainbow trout, Mol. Immunol., 87, 102, 10.1016/j.molimm.2017.03.010 Hou, 2017, Characterization and expression profiling of NOD-like receptor C3 (NLRC3) in mucosal tissues of turbot (Scophthalmus maximus L.) following bacterial challenge, Fish Shellfish Immunol., 66, 231, 10.1016/j.fsi.2017.05.014 Paria, 2016, Identification of Nod like receptor C3 (NLRC3) in Asian seabass, Lates calcarifer: characterisation, ontogeny and expression analysis after experimental infection and ligand stimulation, Fish Shellfish Immunol., 55, 602, 10.1016/j.fsi.2016.06.029 Zhou, 2017, A NLRC3-like gene from blunt snout bream (Megalobrama amblycephala): molecular characterization, expression and association with resistance to Aeromonas hydrophila infection, Fish Shellfish Immunol., 63, 213, 10.1016/j.fsi.2017.02.018 Liang, 2016, Toxicogenomic applications of Chinese rare minnow (Gobiocypris rarus) in aquatic toxicology, Comparative biochemistry and physiology. Part D, Genomics & Proteomics, 19, 174 Giger, 2006, Benzotriazole and tolyltriazole as aquatic contaminants. 1. Input and occurrence in rivers and lakes, Environ. Sci. Technol., 40, 7186, 10.1021/es061565j Liang, 2016, Brain quantitative proteomic responses reveal new insight of benzotriazole neurotoxicity in female Chinese rare minnow (Gobiocypris raruus), Aquat. Toxicol., 181, 67, 10.1016/j.aquatox.2016.10.030 Liang, 2014, Endocrine disrupting effects of benzotriazole in rare minnow (Gobiocypris rarus) in a sex-dependent manner, Chemosphere, 112, 154, 10.1016/j.chemosphere.2014.03.106 Wei, 2008, Proteomic analysis of hepatic protein profiles in rare minnow (Gobiocypris rarus) exposed to perfluorooctanoic acid, J. Proteome Res., 7, 1729, 10.1021/pr7008059 Biales, 2011, Proteomic analysis of zebrafish brain tissue following exposure to the pesticide prochloraz, Aquat. Toxicol., 105, 618, 10.1016/j.aquatox.2011.08.021 Fang, 2010, Identification of differential hepatic proteins in rare minnow (Gobiocypris rarus) exposed to pentachlorophenol (PCP) by proteomic analysis, Toxicol. Lett., 199, 69, 10.1016/j.toxlet.2010.08.008 Qiao, 2016, Deep sexual dimorphism in adult medaka fish liver highlighted by multi-omic approach, Sci Rep, 6, 32459, 10.1038/srep32459 Geter, 2014, Dose-response modeling of early molecular and cellular key events in the CAR-mediated hepatocarcinogenesis pathway, Toxicol. Sci., 138, 425, 10.1093/toxsci/kfu014 Gillette, 2014, Sexually dimorphic effects of ancestral exposure to vinclozolin on stress reactivity in rats, Endocrinology, 155, 3853, 10.1210/en.2014-1253 Dong, 2016, Toxicogenomic assessment of liver responses following subchronic exposure to furan in Fischer F344 rats, Arch. Toxicol., 90, 1351, 10.1007/s00204-015-1561-2 Walker, 2014, Dynamic postnatal developmental and sex-specific neuroendocrine effects of prenatal polychlorinated biphenyls in rats, Mol. Endocrinol., 28, 99, 10.1210/me.2013-1270 Johnson, 2017, Hypothalamic transcriptomic alterations in male and female California mice (Peromyscus californicus) developmentally exposed to bisphenol A or ethinyl estradiol, Phys. Rep., 5 Yamanobe, 2015, Sex differences in shotgun proteome analyses for chronic oral intake of cadmium in mice, PLoS One, 10, 10.1371/journal.pone.0121819 Yang, 2008, Proteomic biomarkers for prenatal bisphenol A-exposure in mouse immune organs, Environ. Mol. Mutagen., 49, 368, 10.1002/em.20394 Lee, 2015, Male and female mice show significant differences in hepatic transcriptomic response to 2,3,7,8-tetrachlorodibenzo-p-dioxin, BMC Genomics, 16, 625, 10.1186/s12864-015-1840-6 Hines, 2015, Concentrations of environmental phenols and parabens in milk, urine and serum of lactating North Carolina women, Reprod. Toxicol., 54, 120, 10.1016/j.reprotox.2014.11.006 Cao, 2012, in human placental and fetal liver tissues collected from Greater Montreal area (Quebec) during 1998–2008, Chemosphere, 89, 505, 10.1016/j.chemosphere.2012.05.003 Hochstenbach, 2012, Global gene expression analysis in cord blood reveals gender-specific differences in response to carcinogenic exposure in utero, Cancer Epidemiol. Biomark. Prev., 21, 1756, 10.1158/1055-9965.EPI-12-0304 Davis, 2017, The Comparative Toxicogenomics Database: update 2017, Nucleic Acids Res., 45, D972, 10.1093/nar/gkw838