Endophytic bacteria of Sphagnum mosses as promising objects of agricultural microbiology
Tóm tắt
Từ khóa
Tài liệu tham khảo
Kloepper, J.W., Leong, J., Teintz, M., and Schroth, M.N., Enhanced plant growth by siderophores produced by plant growth-promoting rhizobacteria, Nature, 1980, vol. 286, p. 665.
Baldani, V., Baldani, J., and Dobereiner, J., Inoculation of rice plants with the endophytic diazotrophs Herbaspirillum seropedicae and Burkholderia spp., Biol. Fertil. Soil, 2000, vol. 30, pp. 485–491.
Okunishi, S., Sako, K., Mano, H., Imamura, A., and Morisaki, H., Bacterial flora of endophytes in the maturing seeds of cultivated rice (Oryza sativa), Microbes and Environments, 2005, vol. 20, pp. 168–177.
McInroy, J. and Kloepper, J., Survey of indigenous bacterial endophytes from cotton and sweet corn, Plant Soil, 1995, vol. 73, pp. 337–342.
Rijavec, T., Lapanje, A., and Rupnik, M., Isolation of bacterial endophytes from germinated maize kernels, Can. J. Microbiol., 2007, vol. 53, pp. 802–808.
Misaghi, I.J. and Donndelinger, C.R., Endophytic bacteria in symptom-free cotton plants, Phytopathology, 1990, vol. 80, pp. 808–811.
Sturz, A.V., Christie, B.R., and Matheson, B.G., Associations of bacterial endophyte populations from red clover and potato crops with potential foe beneficial allelopathy, Can. J. Microbiol., 1998, vol. 44, pp. 162–167.
Krechel, A., Faupel, A., Hallmann, J., Ulrich, A., and Berg, G., Potato-associated bacteria and their antagonistic potential towards plant-pathogenic fungi and the plant-parasitic nematode Meloidogyne incognita (Kofoid & White) Chitwood, Can. J. Microbiol, 2002, vol. 48, pp. 772–786.
Rennie, R.J., Freitas, J.R.D., Ruschel, A.P., and Vose, P.B., Isolation and identification of N2-fixing bacteria associated with sugarcane (Saccharum sp.), Can. J. Microbiol., 1982, vol. 28, pp. 462–467.
Holliday, P., A Dictionary of Plant Pathology, Cambridge: Cambridge Univ. Press, 1989.
Schulz, B. and Boyle, C., What are endophytes? in Microbial Root Endophytes, Boyle, C.J.C. and Sieber, T.N., Eds., Berlin: Springer, 2006, pp. 191–206.
Opelt, K. and Berg, G., Diversity and antagonistic potential of bacteria associated with bryophytes from nutrient-poor habitats of the Baltic Sea coast, Appl. Environ. Microbiol., 2004, vol. 70, no. 11, pp. 6569–6579.
Opelt, K., Berg, C., Schonmann, S., Eberl, L., and Berg, G., High specificity but contrasting biodiversity of Sphagnum-associated bacterial and plant communities in bog ecosystems independent of the geographical region, ISME J., 2007, vol. 1, pp. 502–516.
Bragina, A., Berg, C., Cardinale, M., Shcherbakov, A., Chebotar, V., and Berg, G., Sphagnum mosses harbour highly specific bacterial diversity during their whole lifecycle, ISME J., 2012, vol. 6, no. 4, pp. 802–813.
Raghoebarsing, A.A., Smolders, A.J.P., Schmid, M.C., Rijpstra, W.I.C., Wolters-Arts, M., and Derksen, J.M., Methanotrophic symbionts provide carbon for photosynthesis in peat bogs, Nature, vol. 436, pp. 1153–1156.
Ignatov, M.S., Afonina, O.M., Ignatova, E.A., et al., Check-list of mosses of East Europe and North Asia, Arctoa, 2006, vol. 15, pp. 1–130.
Sambrook, J. and Rassell, D.W., Molecular Cloning: A laboratory Manual, 3rd ed., New York: Cold Spring Harbor Laboratory, 2001.
Grube, M., Cardinale, M., Vieira de Castro, J., Jr., Müller, H., and Berg, G., Species-specific structural and functional diversity of bacterial communities in lichen symbiosis, ISME Journal, 2009, vol. 3, pp. 1105–1115.
Amann, R.I., Binder, B.J., Olson, R.J., Chisholm, S.W., Devereux, R., and Stahl, D.A., Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations, Appl. Environ. Microbiol., 1990, vol. 56, pp. 1919–1925.
Daims, H., Bruhl, A., Amann, R., Schleifer, K.H., and Wagner, M., The domain-specific probe EUB338 is insufficient for the detection of all bacteria: development and evaluation of a more comprehensive probe set, Syst. Appl. Microbiol., 1999, vol. 22, pp. 434–444.
Manz, W., Amann, R., Ludwig, W., Wagner, M., and Schleifer, K.-H., Phylogenetic oligodeoxynucleotide probes for the major subclasses of Proteobacteria: problems and solutions, Syst. Appl. Microbiol., 1992, vol. 15, pp. 593–600.
Opelt, K., Chobot, V., Hadacek, F., Schonmann, S., Eberl, L., and Berg, G., Investigations of the structure and function of bacterial communities associated with Sphagnum mosses, Environ. Microbiol., 2007, vol. 9, no. 11, pp. 2795–2809.
Magnusson, J. and Schnurer, J., Lactobacillus coryniformis subsp. coryniformis strain Si3 produces a broadspectrum proteinaceous antifungal compound, Appl. Environ. Microbiol., 2001, vol. 67, no. 1, pp. 1–5.
Zenova, G.M., Stepanov, A.L., Likhachev, A.A., and Manucharova, N.A., Praktikum po biologii pochv (Practical Course in Soil Biology), Moscow, 2002.
Korostik, E.V., Pinaev, A.G., Akhtemova, G.A., and Andronov, E.E., Universal 16S rRNA primers for characterization of genetic diversity of soil prokaryotes, Ekol. Genet., 2006, vol. 4, no. 4, pp. 32–37.
Netrusov, A.I., Egorova, M.A., and Zakharchuk, L.M., Praktikum po mikrobiologii (Practical Course in Microbiology), Moscow: Akademiya, 2005.
Tepper, E.Z. and Shil’nikova, V.K., Praktikum po mikrobiologii (Practical Course in Microbiology), Moscow: Drofa, 2004.
Kasana, R., Salwan, R., Dhar, H., Dutt, S., and Gulati, A., A rapid and easy method for the detection of microbial cellulases on agar plates using Gram’s iodine, Curr. Microbiol., vol. 57, no. 5, pp. 503–507.
Bric, J.M., Bostock, R.M., and Silverstone, S.E., Rapid in situ assay for indoleacetic acid production by bacteria immobilized on a nitrocellulose membrane, Appl. Environ. Microbiol., 1991, vol. 57, no. 2, pp. 535–538.
Simons, M., van der Bij, A.J., Brand, I., de Weger, L.A., Wijffelman, C. A., and Lugtenberg, B.J., Gnotobiotic system for studing rhizosphere colonization by plant growth-promoting Pseudomonas bacteria, Mol. PlantMicrob. Interact., 1996, vol. 9, no. 7, pp. 600–607.
Rumyantseva, M.L., Simarov, B.V., Onishchuk, O.P., Andronov, E.E., Chizhevskaya, E.P., Belova, V.S., Kurchak, O.N., Muntyan, A.N., Rumyantseva, T.B., and Zatovskaya, T.V., Biologicheskoe raznoobrazie kluben’kovykh bakterii v ekoststemakh i agrotsenozakh. Teoreticheskie osnovy i metody (Biological Diversity of Root Nodule Bacteria in Ecosystems and Agrocenoses), St. Petersburg: ARRIAM, 2011.
Vandamme, P., Opelt, K., Knochel, N., Berg, C., Schonmann, S., Brandt, E.D., Eberl, L., Falsen, E., and Berg, G., Burkholderia bryophila sp. nov. and Burkholderia megapolitana sp. nov., moss-associated species with antifungal and plant-growth-promoting properties, Int. J. Syst. Evol. Microbiol., 2007, vol. 57, pp. 2228–2235.
Shenin, Yu.D., Kruglikova, L.F., Vasyuk, L.F., Kozhemyakov, A.P., Chebotar’, V.K., and Popova, T.A., A new metabolite with fungistatic and bacteriostatic activity produced by Flavobacterium sp. strain L-30, Antibiot. Khimioterap., 1996, vol. 41, no. 5, pp. 6–12.
Kravchenko, L.V., Makarova, N.M., Azarova, T.S., Provorov, N.A., and Tikhonovich, I.A., Isolation and phenotypic characterization of plant growth-promoting rhizobacteria with high antiphytopathogenic activity and root-colonizing ability, Microbiology, 2002, vol. 71, no. 4, pp. 444–448.
Tikhonovich, I.A., Kozhemyakov, A.P., Chebotar’, V.K., et al., Biopreparaty v sel’skom khozyaistve (Metodologiya i praktika primeneniya mikroorganizmov v rastenievodstve i kormoproizvodstve) (Biopreparations in Agriculture: Methodology and Practice of Application of Microorganisms in Plant Cultivation and Feed Production), Moscow: Rossel’khozakademiya, 2005.