Employing ProteoWizard to Convert Raw Mass Spectrometry Data

Current Protocols in Bioinformatics - Tập 46 Số 1 - 2014
Jerry D. Holman1, David L. Tabb1, Parag Mallick2
1*Department of Biomedical Informatics, Vanderbilt University School of Medicine, Nashville, Tennessee
2Department of Radiology, Stanford School of Medicine, Palo Alto, California

Tóm tắt

AbstractAfter raw data have been captured by mass spectrometers in biological LC‐MS/MS experiments, they must be converted from vendor‐specific binary files to open‐format files for manipulation by most software. This protocol details the use of ProteoWizard software for this conversion, taking format features, coding options, and vendor particularities into account. This protocol will aid researchers in preparing their data for analysis by database search engines and other bioinformatics tools. Curr. Protoc. Bioinform. 46:13.24.1‐13.24.9. © 2014 by John Wiley & Sons, Inc.

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Tài liệu tham khảo

10.1038/nbt.2377

10.1016/1044-0305(94)80016-2

10.1002/pmic.201200439

10.1093/bioinformatics/btn323

10.1074/mcp.R110.000133

10.1038/nbt1031

10.1074/mcp.O111.011379

Chamberset al. 2012. See above.

http://proteowizard.sourceforge.net/

http://www.absciex.com/downloads/software‐downloads

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Current Protocols in Bioinformatics

Tập 46 Số 1

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