Emerging phylogeographical patterns of plants and terrestrial vertebrates from Patagonia

Biological Journal of the Linnean Society - Tập 103 Số 2 - Trang 475-494 - 2011
Alicia N. Sérsic1, Andrea Cosacov1, Andrea A. Cocucci1, Leigh A. Johnson2, Raúl Pozner3, Luciano Javier Ávila4, Jack W. Sites3, Mariana Morando4
1Laboratorio de Biología Floral, Instituto Multidisciplinario de Biología Vegetal (IMBIV), CONICET‐Universidad Nacional de Córdoba, Casilla de Correo 495, 5000 Córdoba, Argentina
2Department of Biology and Bean Life Science Museum, 401 WIDB, Brigham Young University, Provo, UT 84602, USA
3Instituto de Botánica Darwinion, Casilla de Correo 22, B1642HYD San Isidro, Prov. de Buenos Aires, Argentina
4Centro Nacional Patagónico – CONICET, Boulevard Almirante Brown 2915, U9120ACD, Puerto Madryn, Chubut, Argentina

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Acosta, 2010, Evidence of chloroplast capture in South American Nothofagus (subgenus Nothofagus, Nothofagaceae), Molecular Phylogenetics and Evolution, 54, 235, 10.1016/j.ympev.2009.08.008

Allnutt, 1999, Genetic variation in Fitzroya cupressoides (alerce), a threatened South American conifer, Molecular Ecology, 8, 975, 10.1046/j.1365-294x.1999.00650.x

Arana, 2010, High genetic variation in marginal fragmented populations at extreme clima conditions of the Patagonian cypress Austrocedrus chilensis, Molecular Phylogenetics and Evolution, 54, 941, 10.1016/j.ympev.2009.11.007

Avila, 2006, Congeneric phylogeography: hypothesizing species limits and evolutionary processes in Patagonian lizards of the Liolaemus boulengeri group (Squamata: Liolaemini), Biological Journal of the Linnean Society, 89, 241, 10.1111/j.1095-8312.2006.00666.x

Azpilicueta, 2009, The effects of Quaternary glaciations in Patagonia as evidenced by chloroplast DNA phylogeography of Southern beech Nothofagus obliqua, Tree Genetics & Genomes, 5, 561, 10.1007/s11295-009-0209-x

Barreda, 2008, The late Cenozoic of Patagonia and Tierra del Fuego, 343, 10.1016/S1571-0866(07)10016-6

Beheregaray, 2008, Twenty years of phylogeography: the state of the field and the challenges for the Southern Hemisphere, Molecular Ecology, 17, 3754, 10.1111/j.1365-294X.2008.03857.x

Bekessy, 2002, Genetic variation in the vulnerable and endemic monkey puzzle tree, detected using RAPDs, Heredity, 88, 243, 10.1038/sj.hdy.6800033

Bermingham, 1998, Comparative phylogeography: concepts and applications, Molecular Ecology, 7, 367, 10.1046/j.1365-294x.1998.00424.x

Breitman, 2011, Lizards from the end of the world: Phylogenetic relationships of the Liolaemus lineomaculatus section (Squamata: Iguania: Liolaemini), Molecular Phylogenetics and Evolution, 10.1016/j.ympev.2011.02.008

Cañón, 2010, Phylogeography of Loxodontomys micropus with comments on the alpha taxonomy of Loxodontomys (Cricetidae: Sigmodontinae), Journal of Mammalogy, 91, 1449, 10.1644/10-MAMM-A-027.1

Carstens, 2007, Integrating coalescent and ecological niche modeling in comparative phylogeography, Evolution, 61, 1439, 10.1111/j.1558-5646.2007.00117.x

Coronato, 2008, The late Cenozoic of Patagonia and Tierra del Fuego, 13, 10.1016/S1571-0866(07)10003-8

Cosacov, 2010, Molecular evidence of ice-age refugia in the Patagonia steppe and post-glacial colonisation of the Andes slopes: insights from the endemic species Calceolaria polyrhiza (Calceolariaceae), Journal of Biogeography, 37, 1463, 10.1111/j.1365-2699.2010.02307.x

Cussac, 2004, The distribution of South American galaxiid fishes: the role of biological traits and post-glacial history, Journal of Biogeography, 31, 103, 10.1046/j.0305-0270.2003.01000.x

Excoffier, 2005, Arlequin version 3.01: an integrated software package for population genetics data analysis, Evolutionary Bioinformatics Online, 1, 47

Ezcurra, 2002, Phylogeny, morphology and biogeography of Chuquiraga, an Andean-Patagonian genus of Asteraceae-Barnadesioideae. In: Young KR, Ulloa Ulloa C, Luteyn JL, Knapp S, eds. Plant evolution and endemism in Andean South America, Botanical Review, 68, 153, 10.1663/0006-8101(2002)068[0153:PMABOC]2.0.CO;2

Fu, 1997, Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection, Genetics, 147, 915, 10.1093/genetics/147.2.915

Hernández, 2008, The late Cenozoic of Patagonia and Tierra del Fuego, 497, 10.1016/S1571-0866(07)10024-5

Heusser, 1999, Paleoecology of the Southern Chilean Lake District-Isla Grande de Chiloé during middle-late Llanquihue glaciation and deglaciation, Geografiska Annaler, 81, 231, 10.1111/j.0435-3676.1999.00058.x

Hewitt, 1996, Some genetic consequences of ice ages, and their role in divergence and speciation, Biological Journal of the Linnean Society, 58, 247, 10.1111/j.1095-8312.1996.tb01434.x

Hewitt, 2004, Genetic consequences of climatic oscillations in the Quaternary, Proceedings of the Royal Society of London Series B, Biological Sciences, 359, 183, 10.1098/rstb.2003.1388

Hickerson, 2010, Phylogeography's past, present, and future: 10 years after Avise, 2000, Molecular Phylogenetics and Evolution, 54, 291, 10.1016/j.ympev.2009.09.016

Hijmans, 2001, Computer tools for spatial analysis of plant genetic resources data: 1. DIVA-GIS, Plant Genetic Resources Newsletter, 127, 15

Himes, 2008, Historical biogeography and post-glacial recolonization of South American temperate rain forest by the relictual marsupial Dromiciops gliroides, Journal of Biogeography, 35, 1415, 10.1111/j.1365-2699.2008.01895.x

Holderegger, 2009, A discussion of different types of glacial refugia used in mountain biogeography and phylogeography, Journal of Biogeography, 36, 476, 10.1111/j.1365-2699.2008.02027.x

Huck, 2009, Range-wide phylogeography of the European temperatemontane herbaceous plant Meum athamanticum Jacq: evidence for periglacial persistence, Journal of Biogeography, 36, 1588, 10.1111/j.1365-2699.2009.02096.x

Jakob, 2006, A chloroplast genealogy of Hordeum (Poaceae): long-term persisting haplotypes, incomplete lineage sorting, regional extinction, and the consequences for phylogenetic inference, Molecular Biology and Evolution, 23, 1602, 10.1093/molbev/msl018

Jakob, 2009, Phylogeographic analyses and paleodistribution modeling indicate Pleistocene in situ survival of Hordeum species (Poaceae) in southern Patagonia without genetic or spatial restriction, Molecular Biology and Evolution, 26, 907, 10.1093/molbev/msp012

Kim, 1998, Habitat islands, genetic diversity, and gene flow in a Patagonian rodent, Molecular Ecology, 7, 667, 10.1046/j.1365-294x.1998.00369.x

Knowles, 2004, The burgeoning field of stastical phylogeography, Journal of Evolutionary Biology, 17, 1, 10.1046/j.1420-9101.2003.00644.x

Knowles, 2007, Estimating a geographically explicit model of population divergence for statistical phylogeography, Evolution, 61, 477, 10.1111/j.1558-5646.2007.00043.x

Lessa, 2010, Genetic footprints of late Quaternary climate change in the diversity of Patagonian-Fueguian rodents, Molecular Ecology, 19, 3031, 10.1111/j.1365-294X.2010.04734.x

Mancini, 2005, Mid-Holocene climatic variability reconstruction from pollen records (32-52°S, Argentina), Quaternary International, 132, 47, 10.1016/j.quaint.2004.07.013

Marchelli, 2001, Genetic diversity and differentiation in a southern beech subjected to introgressive hybridization, Heredity, 87, 284, 10.1046/j.1365-2540.2001.00882.x

Marchelli, 2004, The combined role of glaciation and hybridization in shaping the distribution of genetic variation in a Patagonian southern beech, Journal of Biogeography, 31, 451, 10.1046/j.0305-0270.2003.01008.x

Marchelli, 2006, Multiple ice-age refugia in a southern beech of South America as evidenced by chloroplast DNA markers, Conservation Genetics, 7, 591, 10.1007/s10592-005-9069-6

Marchelli, 1998, Chloroplast DNA markers reveal a geographical divide across Argentinean southern beech Nothofagus nervosa (Phil.) Dim. et Mil. distribution area, Theoretical and Applied Genetics, 97, 642, 10.1007/s001220050940

Markgraf, 1983, Late and postglacial vegetational and paleoclimatic changes in subantarctic, temperate, and arid environments in Argentina, Palynology, 7, 43, 10.1080/01916122.1983.9989252

Martínez, 2011, The ‘Rodados Patagónicos’ (Patagonian Shingle Formation) of eastern Patagonia: environmental conditions of gravel sedimantation, Biological Journal of the Linnean Society, 103, 336, 10.1111/j.1095-8312.2011.01651.x

Mathiasen, 2010, Out in the cold: genetic variation of Nothofagus pumilio (Nothofagaceae) provides evidence for latitudinally distinct evolutionary histories in austral South America, Molecular Ecology, 19, 371, 10.1111/j.1365-294X.2009.04456.x

McCulloch, 2000, Climatic inferences from glacial and paleoecological evidence at the last glacial termination, southern South America, Journal of Quaternary Science, 15, 409, 10.1002/1099-1417(200005)15:4<409::AID-JQS539>3.0.CO;2-#

Morando, 2003, Sampling strategies for delimiting species: genes, individuals, and populations in the Liolaemus elongatus-kriegi complex (Squamata: Liolaemidae) in Andean-Patagonian South America, Systematic Biology, 52, 159, 10.1080/10635150390192717

Morando, 2004, Phylogeny and phylogeography of the Liolaemus darwinii complex (Squamata: Liolaemidae): evidence for introgression and incomplete lineage sorting, Evolution, 58, 842, 10.1111/j.0014-3820.2004.tb00416.x

Morando, 2007, Molecular evidence for a species complex in the patagonian lizard Liolaemus bibronii and phylogeography of the closely related Liolaemus gracilis (Squamata: Liolaemini), Molecular Phylogenetics and Evolution, 43, 952, 10.1016/j.ympev.2006.09.012

Moritz, 2002, Strategies to protect biological diversity and the processes that sustain it, Systematic Biology, 51, 238, 10.1080/10635150252899752

Mraz, 2007, Genetic structure of Hypochaeris uniflora (Asteraceae) suggests vicariance in the Carpathians and rapid post-glacial colonization of the Alps from an eastern Alpine refugium, Journal of Biogeography, 34, 2100, 10.1111/j.1365-2699.2007.01765.x

Muellner, 2005, Pleistocene refugia and recolonization routes in the southern Andes: insights from Hypochaeris palustris (Astraceae, Lactuceae), Molecular Ecology, 14, 203, 10.1111/j.1365-294X.2004.02386.x

Nuñez, 2011, Amphibian phylogeography in the Antipodes: refugia and postglacial colonization explain mitochondrial haplotype distribution in the Patagonian frog Eupsophus calcaratus (Cycloramphidae), Molecular Phylogenetics and Evolution, 58, 343, 10.1016/j.ympev.2010.11.026

Nylinder S Pfeil BE Ehrhart C Sérsic AN Cosacov A Puppo P Janssens SB Lemey P Oxelman B 2010 Phylogeny and biogeography of Caleolariaceae (Lamiales) inferred using novel continuous and discrete models for phylogeographical traits Phylogeny and biogeography of the plant family Calceolariaceae

Ojeda, 2010, Phylogeography and genetic variation in the South American rodent Tympanoctomys barrerae (Rodentia: Octodontidae), Journal of Mammalogy, 91, 302, 10.1644/09-MAMM-A-177.1

Palma, 2005, Phylogeography of Oligoryzomys longicaudatus (Rodentia: Sigmodontinae) in temperate South America, Journal of Mammalogy, 86, 191, 10.1644/1545-1542(2005)086<0191:POOLRS>2.0.CO;2

Pardiñas, 2011, The evolutionary history of sigmodontine rodents in Patagonia and Tierra del Fuego, Biological Journal of the Linnean Society, 103, 495, 10.1111/j.1095-8312.2011.01679.x

Pastorino, 2002, Quaternary evolutionary history of Austrocedrus chilensis, a cypress native to the Andean-Patagonian forest, Journal of Biogeography, 29, 1167, 10.1046/j.1365-2699.2002.00731.x

Pastorino, 2009, The effect of different glaciation patterns over the current genetic structure of the southern beech Nothofagus antarctica, Genetica, 136, 79, 10.1007/s10709-008-9314-2

Petit, 2002, Identification of refugia and post-glacial colonization routes of European white oaks based on chloroplast DNA and fossil pollen evidence, Forest Ecology and Management, 59, 49, 10.1016/S0378-1127(01)00634-X

Pinceel, 2005, Population genetics and identity of an introduced terrestrial slug: Arion subfuscus s.l. in the north-east USA (Gastropoda, Pulmonata, Arionidae), Genetica, 125, 155, 10.1007/s10709-005-5816-3

Ponce, 2011, Paleogeographic evolution of the Atlantic coast of Pampa and Patagonia since the Last Glacial Maximum to the Middle Holocene, Biological Journal of the Linnean Society, 103, 363, 10.1111/j.1095-8312.2011.01653.x

Premoli, 1998, Proceedings of an international workshop: recent advances in biotechnology for tree conservation and management, 157

Premoli, 2000, Isozyme variation and recent biogeographical history of the long-lived conifer Fitzroya cupressoides, Journal of Biogeography, 27, 251, 10.1046/j.1365-2699.2000.00402.x

Premoli, 2001, Effects of population disjunction on isozyme variation in the widespread Pilgerodendron uviferum, Heredity, 87, 337, 10.1046/j.1365-2540.2001.00906.x

Premoli, 2010, Southern-most Nothofagus trees enduring ice ages: genetic evidence and ecological niche retrodiction reveal high latitude (54°S) glacial refugia, Palaeogeography, Palaeoclimatology, Palaeoecology, 298, 247, 10.1016/j.palaeo.2010.09.030

Quiroga, 2010, Genetic structure of Podocarpus nubigena (Podocarpaceae) provides evidence of Quaternary and ancient historical events, Palaeogeography, Palaeoclimatology, Palaeoecology, 285, 186, 10.1016/j.palaeo.2009.11.010

Rabassa, 2008a, The late Cenozoic of Patagonia and Tierra del Fuego, 1, 10.1016/S1571-0866(07)10001-4

Rabassa, 2008b, The late Cenozoic of Patagonia and Tierra del Fuego, 151, 10.1016/S1571-0866(07)10008-7

Rabassa, 1990, Quaternary glaciations of the southern Andes, Quaternary Science Reviews, 9, 153, 10.1016/0277-3791(90)90016-4

Rabassa, 2011, Late Cenozoic Glaciations in Patagonia and Tierra del Fuego: an updated review, Biological Journal of the Linnean Society, 103, 316, 10.1111/j.1095-8312.2011.01681.x

Ramos, 2008, The late Cenozoic of Patagonia and Tierra del Fuego, 57, 10.1016/S1571-0866(07)10004-X

Ramos, 2006, Overview of the tectonic evolution of the southern Central Andes of Mendoza and Neuquén (35°-39°S latitude), Geological Society of America Special Paper, 407, 1

Rodríguez-Serrano, 2006, Molecular phylogeography of Abrothrix olivaceus (Rodentia: Sigmodontinae), Journal of Mammalogy, 87, 971, 10.1644/05-MAMM-A-393R2.1

Rogers, 1995, Genetic evidence for a Pleistocene population explosion, Evolution, 49, 608, 10.2307/2410314

Ronikier, 2008, Phylogeography of Pulsatilla vernalis (L.) Mill. (Ranunculaceae): chloroplast DNA reveals two evolutionary lineages across central Europe and Scandinavia, Journal of Biogeography, 35, 1650, 10.1111/j.1365-2699.2008.01907.x

Ruzzante, 2006, Phylogeography of the Percichthyidae (Pisces) in Patagonia: roles of orogeny, glaciations, and volcanism, Molecular Ecology, 15, 2949, 10.1111/j.1365-294X.2006.03010.x

Ruzzante, 2008, Climate control on ancestral population dynamics: insight from Patagonian fish phylogeography, Molecular Ecology, 17, 2234, 10.1111/j.1365-294X.2008.03738.x

Smith, 2001, Testing models of diversification in mice in the Abrothrix olivaceus/xanthorhinus complex in Chile and Argentina, Molecular Ecology, 10, 397, 10.1046/j.1365-294x.2001.01183.x

Soltis, 2006, Comparative phylogeography of unglaciated eastern North America, Molecular Ecology, 15, 4261, 10.1111/j.1365-294X.2006.03061.x

Souto, 2007, Genetic variation in the widespread Embothrium coccineum (Proteaceae) endemic to Patagonia: effects of phylogeny and historical events, Australian Journal of Botany, 55, 809, 10.1071/BT06183

Suárez, 2007, A Toarcian retro-arc basin of Central Patagonia (Chubut), Argentina: middle Jurassic closure, arc migration and tectonic setting, Revista Geológica de Chile, 34, 63, 10.4067/S0716-02082007000100004

Tajima, 1989, The effect of change in population size on DNA polymorphism, Genetics, 123, 597, 10.1093/genetics/123.3.597

Templeton, 2004, Statistical phylogeography: methods of evaluating and minimizing inference errors, Molecular Ecology, 13, 789, 10.1046/j.1365-294X.2003.02041.x

Templeton, 1995, Separating population structure from population history: a cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the tiger salamander, Ambystoma tigrinum, Genetics, 140, 767, 10.1093/genetics/140.2.767

Tremetsberger, 2009, Pleistocene refugia and polytopic replacement of diploids by tetraploids in the Patagonian and Subantarctic plant Hypochaeris incana (Asteraceae, Cichorieae), Molecular Ecology, 18, 3668, 10.1111/j.1365-294X.2009.04298.x

Victoriano, 2008, Comparative phylogeography of codistributed species of Chilean Liolaemus (Squamata: Tropiduridae) from the central-southern Andean range, Molecular Ecology, 17, 2397, 10.1111/j.1365-294X.2008.03741.x

Xu, 2009, Pleistocene glaciation leaves deep signature on the freshwater crab Aegla alacalufi in Chilean Patagonia, Molecular Ecology, 18, 904, 10.1111/j.1365-294X.2008.04070.x

Zemlak, 2008, Across the southern Andes on fin: glacial refugia, drainage reversals and a secondary contact zone revealed by the phylogeographical signal of Galaxias platei in Patagonia, Molecular Ecology, 17, 5049, 10.1111/j.1365-294X.2008.03987.x