Effects of Bacillus amyloliquefaciens FZB42 on Lettuce Growth and Health under Pathogen Pressure and Its Impact on the Rhizosphere Bacterial Community
Tóm tắt
Từ khóa
Tài liệu tham khảo
V González-García, 2006, Review. Biology and Systematics of the form genus <italic>Rhizoctonia</italic>, Span J Agric Res, 4, 55, 10.5424/sjar/2006041-178
FN Martin, 2003, Development of alternative strategies for management of soilborne pathogens currently controlled with methyl bromide, Ann Review Phytopathol, 41, 325, 10.1146/annurev.phyto.41.052002.095514
AO Adesemoye, 2009, Plant-microbes interactions in enhanced fertilizer-use efficiency, Appl Microbiol Biotechnol, 85, 1, 10.1007/s00253-009-2196-0
R Grosch, 2005, Effectiveness of 3 antagonistic bacterial isolates to control <italic>Rhizoctonia solani</italic> Kühn on lettuce and potato, Can J Microbiol, 51, 345, 10.1139/w05-002
M Ongena, 2005, <italic>Bacillus subtilis</italic> M4 decreases plant susceptibility toward fungal pathogens by increasing host resistance associated with differential gene expression, Appl Microb Cell Physiol, 67, 692
MF Adesina, 2009, In vitro antagonists of <italic>Rhizoctonia solani</italic> tested on lettuce: rhizosphere competence, biocontrol efficiency and rhizosphere microbial community response, FEMS Microbiol Ecol, 69, 67, 10.1111/j.1574-6941.2009.00685.x
H Müller, 2009, Quorum-sensing effects in the antagonistic rhizosphere bacterium <italic>Serratia plymuthica</italic> HRO-C48, FEMS Microbiol Ecol, 67, 468, 10.1111/j.1574-6941.2008.00635.x
J Hallmann, 1999, Chitin-mediated changes in bacterial communities of the soil, rhizosphere and within roots of cotton in relation to nematode control, Soil Biol Biochem, 31, 551, 10.1016/S0038-0717(98)00146-1
PJ Piggot, 2004, Sporulation of <italic>Bacillus subtilis</italic>, Curr Opin Microbiol, 7, 579, 10.1016/j.mib.2004.10.001
I Tiago, 2004, Metabolic and genetic diversity of mesophilic and thermophilic bacteria isolated from composted municipal sludge on poly-epsilon-caprolactones, Curr Microbiol, 49, 407, 10.1007/s00284-004-4353-0
LA Silo-Suh, 1998, Target range of zwittermicin A, an aminopolyol antibiotic from <italic>Bacillus cereus</italic>, Curr Microbiol, 37, 6, 10.1007/s002849900328
R Borriss, 2011, Relationship of <italic>Bacillus amyloliquefaciens</italic> clades associated 1 with strains DSM 7T and FZB42: a proposal for <italic>Bacillus amyloliquefaciens</italic> subsp. <italic>amyloliquefaciens</italic> subsp. nov. and <italic>Bacillus amyloliquefaciens</italic> subsp. <italic>plantarum</italic> subsp. nov. based on their discriminating complete genome sequences, Int J Sys Evol Microbiol, 61, 1786, 10.1099/ijs.0.023267-0
XH Chen, 2007, Comparative analysis of the complete genome sequence of the plant growth-promoting bacterium <italic>Bacillus amyloliquefaciens</italic> FZB42, Nat Biotechnol, 25, 1007, 10.1038/nbt1325
A Koumoutsi, 2004, Structural and functional characterization of gene clusters directing nonribosomal synthesis of bioactive cyclic lipopeptides in <italic>Bacillus amyloliquefaciens</italic> strain FZB42, J Bacteriol, 186, 1084, 10.1128/JB.186.4.1084-1096.2004
XH Chen, 2006, Structural and functional characterization of three polyketide synthase gene clusters in <italic>Bacillus amyloliquefaciens</italic> FZB 42, J Bacteriol, 188, 4024, 10.1128/JB.00052-06
B Fan, 2011, Efficient colonization of plant roots by the plant growth promoting bacterium <italic>Bacillus amyloliquefaciens</italic> FZB42, engineered to express green fluorescent protein, J Biotech, 151, 303, 10.1016/j.jbiotec.2010.12.022
R Grosch, 1999, Use of <italic>Bacillus subtilis</italic> as a biocontrol agent. III. Influence of <italic>Bacillus subtilis</italic> on fungal root diseases and on yield in soilless culture, J Plant Dis Protec, 106, 568
EE Idriss, 2004, Use of <italic>Bacillus subtilis</italic> as biocontrol agent. VI. Phytohormone-like action of culture filtrates prepared from plant growth-promoting <italic>Bacillus amyloliquefaciens</italic> FZB24, FZB42, FZB45 and <italic>Bacillus subtilis</italic> FZB37, J Plant Dis Protec, 111, 583
AV Yao, 2006, Effect of FZB24 <italic>Bacillus subtilis</italic> as a biofertilizer on cotton yields in field tests, Arch Phytopathol Plant Prot, 39, 1
A Guel, 2008, Effects of nutrition and <italic>Bacillus amyloliquefaciens</italic> on tomato (<italic>Solarium lycopersicum</italic> L.) growing in perlite, Span J Agric Res, 6, 422, 10.5424/sjar/2008063-335
R Scholz, 2011, Plantazolicin, a Novel Microcin B17/Streptolysin S-Like Natural. Product from <italic>Bacillus amyloliquefaciens</italic> FZB42, J Bact, 193, 215, 10.1128/JB.00784-10
Davis RM., Subbarao KV, Raid RN, Kurtz EA (1997) Compendium of lettuce diseases. APS Press, 15–16pp.
B Lugtenberg, 2009, Plant-growth-promoting rhizobacteria, Ann Rev Microbiol, 63, 541, 10.1146/annurev.micro.62.081307.162918
N Zhang, 2011, A new bioorganic fertilizer can effectively control banana wilt by strong colonization with <italic>Bacillus subtilis</italic> N11, Plant Soil, 344, 87, 10.1007/s11104-011-0729-7
D Haas, 2005, Biological control of soil-borne pathogens by fluorescent pseudomonads, Nat Rev Microbiol, 3, 307, 10.1038/nrmicro1129
JM Raaijmakers, 2009, The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms, Plant Soil, 321, 341, 10.1007/s11104-008-9568-6
M Götz, 2006, Survival of gfp-tagged antagonistic bacteria in the rhizosphere of tomato plants and their effects on the indigenous bacterial community, FEMS Microbiol Ecol, 56, 207, 10.1111/j.1574-6941.2006.00093.x
R Grosch, 2012, Biocontrol of <italic>Rhizoctonia solani</italic>: complex interaction of biocontrol strains, pathogen and indigenous microbial community in the rhizosphere of lettuce shown by molecular methods, Plant Soil, 360, 343, 10.1007/s11104-012-1239-y
CA Osborne, 2010, Detection of a reproducible, single-member shift in soil bacterial communities exposed to low levels of hydrogen, Appl Environ Microbiol, 76, 1471, 10.1128/AEM.02072-09
N Ling, 2010, Development of a mode of application of bioorganic fertilizer for improving the biocontrol efficacy to Fusarium wilt, Biocontrol, 55, 673, 10.1007/s10526-010-9290-1
R Grosch, 2004, Characterisation of <italic>Rhizoctonia solani</italic> anastomosis groups causing bottom rot in field grown lettuce in Germany, Eur J Plant Path, 110, 53, 10.1023/B:EJPP.0000010137.69498.10
B Gutezeit, 1993, Das Beregnungsbedarfssystem für Freilandgemüse, Gemüse, 29, 106
A Kofoet, 2001, Kopfsalatsorten und ihre Anfälligkeit gegenüber bodenbürtigen Pathogenen, Gemüse, 37, 10
U Edwards, 1989, Isolation and direct complete nucleotide determination of entire genes. Characterization of a gene coding for 16S ribosomal RNA, Nucl Acids Res, 17, 7843, 10.1093/nar/17.19.7843
DJ Lane, 1985, Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses, Proc Natl Acad Sci USA, 82, 6955, 10.1073/pnas.82.20.6955
AM Osborn, 2000, An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics, Environ Microbiol, 2, 39, 10.1046/j.1462-2920.2000.00081.x
SW Culman, 2009, T-REX: Software for the Processing and Analysis of T-RFLP data, BMC Bioinformatics, 10, 171, 10.1186/1471-2105-10-171
SW Culman, 2008, Analysis of TRFLP data using analysis of variance and ordination methods:a comparative study, J Microbiol Meth, 75, 55, 10.1016/j.mimet.2008.04.011
Ø Hammer, 2001, PAST: Paleontological statistics software package for education and data analysis, Palaeontol Electron, 4, 9p
KR Clarke, 1993, Non-parametric multivariate analysis of changes in community structure, Aust J Ecol, 18, 117, 10.1111/j.1442-9993.1993.tb00438.x
Clarke KR, Gorley RN (2001) Primer v5: User manual/tutorial, Primer-E. Plymouth UK, 91.
A Ramette, 2007, Multivariate analyses in microbial ecology, FEMS Microbiol Ecol, 62, 142, 10.1111/j.1574-6941.2007.00375.x
RL Berendsen, 2012, The rhizosphere microbiome and plant health, Trends Plant Sci, 17, 478, 10.1016/j.tplants.2012.04.001
V Nihorimbere, 2012, Impact of rhizosphere factors on cyclic lipopeptide signature from the plant beneficial strain <italic>Bacillus amyloliquefaciens</italic> S499, FEMS Microbiol Ecol, 79, 176, 10.1111/j.1574-6941.2011.01208.x
JW Kloepper, 2004, Induced systemic resistance and promotion of plant growth by <italic>Bacillus</italic> spp, Phytopathol, 94, 1259, 10.1094/PHYTO.2004.94.11.1259
McCune B, Grace JB (2002) Analysis of ecological communities, MjM Software Design, Gleneden Beach, OR.
P Legendre, 2001, Ecologically meaningful transformations for ordination of species data, Oecologia, 129, 271, 10.1007/s004420100716
OS Correa, 2009, <italic>Bacillus amyloliquefaciens</italic> BNM122, a potential microbial biocontrol agent applied on soybean seeds, causes a minor impact on rhizosphere and soil microbial communities, Appl Soil Ecol, 41, 185, 10.1016/j.apsoil.2008.10.007
K Scherwinski, 2008, Effect of bacterial antagonists on lettuce: active biocontrol of <italic>Rhizoctonia solani</italic> and negligible, short –term effects on nontarget microorganisms, FEMS Microbiol Ecol, 64, 106, 10.1111/j.1574-6941.2007.00421.x
R Grosch, 2006, Fungal antagonists of the plant pathogen <italic>Rhizoctonia solani</italic>: selection, control efficacy and influence on the indigenous microbial community, Mycol Res, 110, 1464, 10.1016/j.mycres.2006.09.014
A Hartmann, 2009, Plant-driven selection of microbes, Plant Soil, 321, 235, 10.1007/s11104-008-9814-y
B Lee, 2012, Foliar aphid feeding recruits rhizosphere bacteria and primes plant immunity against pathogenic and non-pathogenic bacteria in pepper, Ann Bot, 110, 281, 10.1093/aob/mcs055