Effect of reproductive tract environment following controlled ovarian hyperstimulation treatment on embryo development and global transcriptome profile of blastocysts: implications for animal breeding and human assisted reproduction

Achard, 2005, Optimization of artificial inseminations with donor semen: a four-year experience, Gynecol Obstet Fertil, 33, 877, 10.1016/j.gyobfe.2005.07.040

Amieux, 2002, Increased basal cAMP-dependent protein kinase activity inhibits the formation of mesoderm-derived structures in the developing mouse embryo, J Biol Chem, 277, 27294, 10.1074/jbc.M200302200

Andersen, 2007, Assisted reproductive technology in Europe, 2003. Results generated from European registers by ESHRE, Hum Reprod, 22, 1513, 10.1093/humrep/dem053

Ashworth, 1989, Evidence of an association between the survival of embryos and the periovulatory plasma progesterone concentration in the ewe, J Reprod Fertil, 87, 23, 10.1530/jrf.0.0870023

Baart, 2009, Ovarian stimulation and embryo quality, Reprod Biomed Online, 18, 45, 10.1016/S1472-6483(10)60448-8

Bauersachs, 2006, Embryo-induced transcriptome changes in bovine endometrium reveal species-specific and common molecular markers of uterine receptivity, Reproduction, 132, 319, 10.1530/rep.1.00996

Besenfelder, 1998, Tubal transfer of bovine embryos: a simple endoscopic method reducing long-term exposure of in vitro produced embryos, Theriogenology, 50, 739, 10.1016/S0093-691X(98)00179-4

Besenfelder, 2001, Collection of tubal stage bovine embryos by means of endoscopy. A technique report, Theriogenology, 55, 837, 10.1016/S0093-691X(01)00447-2

Besenfelder, 2008, Endoscopic recovery of early preimplantation bovine embryos: effect of hormonal stimulation, embryo kinetics and repeated collection, Reprod Domest Anim, 43, 566, 10.1111/j.1439-0531.2007.00953.x

Besenfelder, 2010, Endoscopic approaches to manage in vitro and in vivo embryo development: use of the bovine oviduct, Theriogenology, 73, 768, 10.1016/j.theriogenology.2009.07.003

Betts, 2001, Genetic regulation of embryo death and senescence, Theriogenology, 55, 171, 10.1016/S0093-691X(00)00453-2

Bó, 2008, Alternative approaches to setting up donor cows for superstimulation, Theriogenology, 69, 81, 10.1016/j.theriogenology.2007.09.005

Brison, 1991, Energy metabolism in late preimplantation rat embryos, J Reprod Fertil, 93, 245, 10.1530/jrf.0.0930245

Büchler, 1988, Catalytic subunit of cAMP-dependent protein kinase is essential for cAMP-mediated mammalian gene expression, FEBS Letter, 228, 27, 10.1016/0014-5793(88)80577-5

Burton, 2003, Oxygen, early embryonic metabolism and free radical-mediated embryopathies, Reprod Biomed Online, 6, 84, 10.1016/S1472-6483(10)62060-3

Carney, 1990, Effects of superovulation, embryo recovery, culture system and embryo transfer on development of rabbit embryos in vivo and in vitro, J Reprod Fertil, 89, 543, 10.1530/jrf.0.0890543

Carter, 2008, Effect of increasing progesterone concentration from Day 3 of pregnancy on subsequent embryo survival and development in beef heifers, Reprod Fertil Dev, 20, 368, 10.1071/RD07204

Carter, 2010, Effect of elevated circulating progesterone concentration on bovine blastocyst development and global transcriptome following endoscopic transfer of in vitro produced embryos to the bovine oviduct, Biol Reprod, 83, 707, 10.1095/biolreprod.109.082354

Check, 1992, Comparison of pregnancy rates following in vitro fertilization-embryo transfer between the donors and the recipients in a donor oocyte program, J Assist Reprod Genet, 9, 248, 10.1007/BF01203822

Clemente, 2009, Progesterone and conceptus elongation in cattle: a direct effect on the embryo or an indirect effect via the endometrium?, Reproduction, 138, 507, 10.1530/REP-09-0152

Diskin, 2008, Embryonic and early foetal losses in cattle and other ruminants, Reprod Domest Anim, 43, 260, 10.1111/j.1439-0531.2008.01171.x

Diskin, 2006, Embryo survival in dairy cows managed under pastoral conditions, Anim Reprod Sci, 96, 297, 10.1016/j.anireprosci.2006.08.008

Enright, 2000, Culture of in vitro produced bovine zygotes in vitro vs in vivo: implications for early embryo development and quality, Theriogenology, 54, 659, 10.1016/S0093-691X(00)00381-2

Ertzeid, 1992, Adverse effects of gonadotrophin treatment on pre- and postimplantation development in mice, J Reprod Fertil, 96, 649, 10.1530/jrf.0.0960649

Ertzeid, 2001, The impact of ovarian stimulation on implantation and fetal development in mice, Hum Reprod, 16, 221, 10.1093/humrep/16.2.221

Fatemi, 2009, The luteal phase after 3 decades of IVF: what do we know?, Reprod Biomed Online, 19, 4331, 10.1016/S1472-6483(10)61065-6

Fauque, 2007, Assisted reproductive technology affects developmental kinetics, H19 imprinting control region methylation and H19 gene expression in individual mouse embryos, BMC Dev Biol, 7, 116, 10.1186/1471-213X-7-116

Fauser, 2003, Reproductive biology and IVF: ovarian stimulation and luteal phase consequences, Trends Endocrinol Metab, 14, 236, 10.1016/S1043-2760(03)00075-4

Ferrara, 2002, Intrauterine insemination with frozen donor sperm. Pregnancy outcome in relation to age and ovarian stimulation regime, Hum Reprod, 17, 2320, 10.1093/humrep/17.9.2320

Fischer, 1993, Oxygen tension in the oviduct and uterus of rhesus monkeys, hamsters and rabbits, J Reprod Fertil, 99, 673, 10.1530/jrf.0.0990673

Forde, 2009, Progesterone-regulated changes in endometrial gene expression contribute to advanced conceptus development in cattle, Biol Reprod, 81, 784, 10.1095/biolreprod.108.074336

Garrett, 1988, Effect of exogenous progesterone on prostaglandin F2 alpha release and the interestrous interval in the bovine, Prostaglandins, 36, 85, 10.1016/0090-6980(88)90104-9

Gott, 1990, Non-invasive measurement of pyruvate and glucose uptake and lactate production by single human preimplantation embryos, Hum Reprod, 5, 104, 10.1093/oxfordjournals.humrep.a137028

Greve, 2001, Rendez-vous in the oviduct: implications for superovulation and embryo transfer, Reprod Nutr Dev, 41, 451, 10.1051/rnd:2001144

Harvey, 2004, Oxygen-regulated gene expression in bovine blastocysts, Biol Reprod, 71, 1108, 10.1095/biolreprod.104.028639

Hugentobler, 2007, Ion concentrations in oviduct and uterine fluid and blood serum during the estrous cycle in the bovine, Theriogenology, 68, 538, 10.1016/j.theriogenology.2007.04.049

Hugentobler, 2008, Energy substrates in bovine oviduct and uterine fluid and blood plasma during the oestrous cycle, Mol Reprod Dev, 75, 496, 10.1002/mrd.20760

Hugentobler, 2010, Effects of changes in the concentration of systemic progesterone on ions, amino acids and energy substrates in cattle oviduct and uterine fluid and blood, Reprod Fertil Dev, 22, 684, 10.1071/RD09129

Hyttel, 1989, Ultrastructure of oocyte maturation and fertilization in superovulated cattle, Prog Clin Biol Res, 296, 287

Inskeep, 2004, Preovulatory, postovulatory, and postmaternal recognition effects of concentrations of progesterone on embryonic survival in the cow, J Anim Sci, 82, E24, 10.2527/2004.8213_supplE24x

Killian, 2004, Evidence for the role of oviduct secretions in sperm function, fertilization and embryo development, Anim Reprod Sci, 82–83, 141, 10.1016/j.anireprosci.2004.04.028

Leese, 1995, Metabolic control during preimplantation mammalian development, Hum Reprod Update, 1, 63, 10.1093/humupd/1.1.63

Leese, 2002, Quiet please, do not disturb: a hypothesis of embryo metabolism and viability, Bioessays, 24, 845, 10.1002/bies.10137

Leese, 2007, Embryo viability and metabolism: obeying the quiet rules, Hum Reprod, 22, 3047, 10.1093/humrep/dem253

Leese, 2008, Metabolism of the viable mammalian embryo: quietness revisited, Mol Hum Reprod, 14, 667, 10.1093/molehr/gan065

Levy, 2001, Genetic regulation of preimplantation embryo survival, Int Rev Cytol, 210, 1, 10.1016/S0074-7696(01)10002-1

Lim, 1997, Multiple female reproductive failures in cyclooxygenase 2-deficient mice, Cell, 91, 197, 10.1016/S0092-8674(00)80402-X

Lonergan, Embryonic loss in cattle: a cow or embryo-induced phenomenon?, 119

Lonergan, 2011, Multiple ovulation and embryo transfer, Encyclopedia of Dairy Sciences, 10.1016/B978-0-12-374407-4.00201-6

Lonergan, 2003, Effect of culture environment on embryo quality and gene expression—experience from animal studies, Reprod Biomed Online, 7, 657, 10.1016/S1472-6483(10)62088-3

Looney, 2010, Practical applications of new research information in the practice of bovine embryo transfer, Reprod Fertil Dev, 22, 145, 10.1071/RD09223

Mann, 2001, Relationship between maternal endocrine environment, early embryo development and inhibition of the luteolytic mechanism in cows, Reproduction, 121, 175, 10.1530/rep.0.1210175

McKiernan, 1998, Gonadotrophin stimulation of donor females decreases post-implantation viability of cultured one-cell hamster embryos, Hum Reprod, 13, 724, 10.1093/humrep/13.3.724

McNeill, 2006, Effect of systemic progesterone concentration on the expression of progesterone-responsive genes in the bovine endometrium during the early luteal phase, Reprod Fertil Dev, 18, 573, 10.1071/RD05100

Murray, 1995, Oviduct during early pregnancy: hormonal regulation and interactions with the fertilized ovum, Microsc Res Tech, 31, 497, 10.1002/jemt.1070310606

Neuer, 2000, The role of heat shock proteins in reproduction, Hum Reprod Update, 6, 149, 10.1093/humupd/6.2.149

Pinborg, 2010, Infant outcome of 957 singletons born after frozen embryo replacement: The Danish National Cohort Study 1995–2006, Fertil Steril, 94, 1320, 10.1016/j.fertnstert.2009.05.091

Rizos, 2002, Analysis of differential messenger RNA expression between bovine blastocysts produced in different culture systems: implications for blastocyst quality, Biol Reprod, 66, 589, 10.1095/biolreprod66.3.589

Rizos, 2010, Contribution of the female reproductive tract to low fertility, J Dairy Sci, 93, 1022, 10.3168/jds.2009-2605

Roesler, 1988, Cyclic AMP and the induction of eukaryotic gene transcription, J Biol Chem, 263, 9063, 10.1016/S0021-9258(19)76506-5

Rossignol, 2006, The epigenetic imprinting defect of patients with Beckwith-Wiedemann syndrome born after assisted reproductive technology is not restricted to the 11p15 region, J Med Genet, 43, 902, 10.1136/jmg.2006.042135

Sato, 2007, Aberrant DNA methylation of imprinted loci in superovulated oocytes, Hum Reprod, 22, 26, 10.1093/humrep/del316

Satterfield, 2006, Progesterone regulation of preimplantation conceptus growth and galectin 15 (LGALS15) in the ovine uterus, Biol Reprod, 75, 289, 10.1095/biolreprod.106.052944

Shih, 2008, Factors affecting low birthweight after assisted reproduction technology: difference between transfer of fresh and cryopreserved embryos suggests an adverse effect of oocyte collection, Hum Reprod, 23, 1644, 10.1093/humrep/den150

Sirard, 2006, Contribution of the oocyte to embryo quality, Theriogenology, 65, 126, 10.1016/j.theriogenology.2005.09.020

Smyth, 2005, Limma: linear models for microarray data, Bioinformatics and Computational Biology Solutions Using r and Bioconductor, 10.1007/0-387-29362-0_23

Stafford-Bell, 2001, Surrogacy in Australia: implantation rates have implications for embryo quality and uterine receptivity, Reprod Fertil Dev, 13, 99, 10.1071/RD00044

Stronge, 2005, Post-insemination milk progesterone concentration and embryo survival in dairy cows, Theriogenology, 64, 1212, 10.1016/j.theriogenology.2005.02.007

Tesfaye, 2007, Suppression of connexin 43 and E-cadherin transcripts in in vitro derived bovine embryos following culture in vitro or in vivo in the homologous bovine oviduct, Mol Reprod Dev, 74, 978, 10.1002/mrd.20678

Thompson, 1996, Oxygen uptake and carbohydrate metabolism by in vitro derived bovine embryos, J Reprod Fertil, 106, 299, 10.1530/jrf.0.1060299

Thompson, 1998, Total protein content and protein synthesis within pre-elongation stage bovine embryos, Mol Reprod Dev, 50, 139, 10.1002/(SICI)1098-2795(199806)50:2<139::AID-MRD3>3.0.CO;2-L

Thompson, 2000, Effect of inhibitors and uncouplers of oxidative phosphorylation during compaction and blastulation of bovine embryos cultured in vitro, J Reprod Fertil, 118, 47, 10.1530/reprod/118.1.47

Van der Auwera, 2001, Superovulation of female mice delays embryonic and fetal development, Hum Reprod, 16, 1237, 10.1093/humrep/16.6.1237

Van der Auwera, 1999, The influence of in-vitro culture versus stimulated and untreated oviductal environment on mouse embryo development and implantation, Hum Reprod, 14, 2570, 10.1093/humrep/14.10.2570

Vardhanabhuti, 2006, A comparison of statistical tests for detecting differential expression using Affymetrix oligonucleotide microarrays, OMICS, 10, 555, 10.1089/omi.2006.10.555

Veleva, 2009, Elective single embryo transfer with cryopreservation improves the outcome and diminishes the costs of IVF/ICSI, Hum Reprod, 24, 1632, 10.1093/humrep/dep042

Wennerholm, 2009, Children born after cryopreservation of embryos or oocytes: a systematic review of outcome data, Hum Reprod, 24, 2158, 10.1093/humrep/dep125