Edaphic factors but not plant characteristics mainly alter soil microbial properties along a restoration chronosequence of Pinus tabulaeformis stands on Mt. Ziwuling, China
Tài liệu tham khảo
Aanderud, 2011, Validation of heavy-water stable isotope probing for the characterization of rapidly responding soil bacteria, Appl. Environ. Microbiol., 77, 4589, 10.1128/AEM.02735-10
Abarenkov, 2010, The UNITE database for molecular identification of fungi–recent updates and future perspectives, New Phytol., 186, 281, 10.1111/j.1469-8137.2009.03160.x
Bao, 2000
Barak, 1997, Effects of long-term soil acidification due to nitrogen fertilizer inputs in Wisconsin, Plant Soil, 197, 61, 10.1023/A:1004297607070
Biddle, 2008, Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment, Proc. Natl. Acad. Sci. U. S. A., 105, 10583, 10.1073/pnas.0709942105
Bowles, 2014, Soil enzyme activities, microbial communities, and carbon and nitrogen availability in organic agroecosystems across an intensively-managed agricultural landscape, Soil Biol. Biochem., 68, 252, 10.1016/j.soilbio.2013.10.004
Bremner, 1982, Nitrogen-total, 595
Brookes, 1984, Phosphorus in the soil microbial biomass, Soil Biol. Biochem., 16, 169, 10.1016/0038-0717(84)90108-1
Brookes, 1985, Chloroform fumigation and the release of soil nitrogen: a rapid direct extraction method to measure microbial biomass nitrogen in soil, Soil Biol. Biochem., 17, 837, 10.1016/0038-0717(85)90144-0
Caporaso, 2010, QIIME allows analysis of high-throughput community sequencing data, Nat. Methods, 7, 335, 10.1038/nmeth.f.303
Cassman, 2016, Plant and soil fungal but not soil bacterial communities are linked in long-term fertilized grassland, Sci. Rep., 6, 10.1038/srep23680
Chapin, 2003, Nitrogen, phosphorus, and carbon mineralization in response to nutrient and lime additions in peatlands, Soil Sci., 168, 409, 10.1097/01.ss.0000075286.87447.5d
Chen, 2003, Soil microbial biomass during the early establishment of hoop pine plantation: seasonal variation and impacts of site preparation, For. Ecol. Manag., 186, 213, 10.1016/S0378-1127(03)00275-5
Chen, 2016, Patterns and drivers of soil microbial communities in Tibetan alpine and global terrestrial ecosystems, J. Biogeogr., 43, 2027, 10.1111/jbi.12806
Clemmensen, 2013, Roots and associated fungi drive long-term carbon sequestration in boreal forest, Science, 339, 1615, 10.1126/science.1231923
De Deyn, 2008, Plant functional traits and soil carbon sequestration in contrasting biomes, Ecol. Lett., 11, 516, 10.1111/j.1461-0248.2008.01164.x
Edgar, 2010, Search and clustering orders of magnitude faster than BLAST, Bioinformatics, 26, 2460, 10.1093/bioinformatics/btq461
FAO, 1972, FAO-UNESCO soil map of the world, 1:5000000
Fu, 2010, Soil organic carbon and total nitrogen as affected by vegetation types in Northern Loess Plateau of China, Geoderma, 155, 31, 10.1016/j.geoderma.2009.11.020
Geisseler, 2010, Pathways of nitrogen utilization by soil microorganisms–a review, Soil Biol. Biochem., 42, 2058, 10.1016/j.soilbio.2010.08.021
Guan, 1986
Hannula, 2012, 13C pulse-labeling assessment of the community structure of active fungi in the rhizosphere of a genetically starch-modified potato (Solanum tuberosum) cultivar and its parental isoline, New Phytol., 194, 784, 10.1111/j.1469-8137.2012.04089.x
Ho, 2017, Revisiting life strategy concepts in environmental microbial ecology, FEMS Microbiol. Ecol., 93
Jackson, 1989, Short-term partitioning of ammonium and nitrate between plants and microbes in an annual grassland, Soil Biol. Biochem., 21, 409, 10.1016/0038-0717(89)90152-1
Kang, 2014, Population structure and spatial pattern of main tree species in secondary Betula platyphylla forest in Ziwuling Mountains, China, Sci. Rep., 4, 6873, 10.1038/srep06873
Kardol, 2006, Temporal variation in plant-soil feedback controls succession, Ecol. Lett., 9, 1080, 10.1111/j.1461-0248.2006.00953.x
Kivlin, 2014, Environmental filtering affects soil fungal community composition more than dispersal limitation at regional scales, Fungal Ecol., 12, 14, 10.1016/j.funeco.2014.04.004
Kou, 2016, The effect of Robinia pseudoacacia afforestation on soil and vegetation properties in the Loess Plateau (China): a chronosequence approach, For. Ecol. Manag., 375, 146, 10.1016/j.foreco.2016.05.025
Kyaschenko, 2017, Shift in fungal communities and associated enzyme activities along an age gradient of managed Pinus sylvestris stands, ISME J., 11, 863, 10.1038/ismej.2016.184
Lange, 2015, Plant diversity increases soil microbial activity and soil carbon storage, Nat. Commun., 6, 6707, 10.1038/ncomms7707
Lauber, 2009, Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale, Appl. Environ. Microbiol., 75, 5111, 10.1128/AEM.00335-09
Leff, 2015, Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe, Proc. Natl. Acad. Sci., 112, 10967, 10.1073/pnas.1508382112
Lesturgez, 2006, Soil acidification without pH drop under intensive cropping systems in Northeast Thailand, Agric. Ecosyst. Environ., 114, 239, 10.1016/j.agee.2005.10.020
Li, 2002, Soil bulk density effects on soil microbial populations and enzyme activities during the growth of maize (Zea mays L.) planted in large pots under field exposure, Can. J. Soil Sci., 82, 147, 10.4141/S01-026
Marzluf, 1997, Genetic regulation of nitrogen metabolism in the fungi, Microbiol. Mol. Biol. Rev., 61, 17, 10.1128/.61.1.17-32.1997
Merrick, 1995, Nitrogen control in bacteria, Microbiol. Mol. Biol. Rev., 59, 604
Millard, 2010, Does grassland vegetation drive soil microbial diversity?, Nutr. Cycl. Agroecosyst., 88, 147, 10.1007/s10705-009-9314-3
Morrissey, 2016, Phylogenetic organization of bacterial activity, ISME J., 10, 2336, 10.1038/ismej.2016.28
Mukherjee, 2014, Oral mycobiome analysis of HIV-infected patients: identification of Pichia as an antagonist of opportunistic fungi, PLoS Pathog., 10, 10.1371/journal.ppat.1003996
Nelson, 1982, Total carbon, organic carbon, and organic matter, 534
Olsen, 1982, Phosphorus, 403
Parkinson, 1975, A wet oxidation procedure suitable for the determination of nitrogen and mineral nutrients in biological material, Commun. Soil Sci. Plant Anal., 6, 1, 10.1080/00103627509366539
Pérez-Ramos, 2012, Evidence for a ‘plant community economics spectrum’driven by nutrient and water limitations in a Mediterranean rangeland of southern France, J. Ecol., 100, 1315, 10.1111/1365-2745.12000
Price, 2009, FastTree: computing large minimum evolution trees with profiles instead of a distance matrix, Mol. Biol. Evol., 26, 1641, 10.1093/molbev/msp077
Prober, 2015, Plant diversity predicts beta but not alpha diversity of soil microbes across grasslands worldwide, Ecol. Lett., 18, 85, 10.1111/ele.12381
Ren, 2017, Response of microbial diversity to C:N:P stoichiometry in fine root and microbial biomass following afforestation, Biol. Fertil. Soils, 53, 1, 10.1007/s00374-017-1197-x
Ren, 2018, Differential responses of soil microbial biomass, diversity, and compositions to altitudinal gradients depend on plant and soil characteristics, Sci. Total Environ., 61, 750, 10.1016/j.scitotenv.2017.08.110
Schloss, 2009, Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities, Appl. Environ. Microbiol., 75, 7537, 10.1128/AEM.01541-09
Siles, 2016, Abundance and diversity of bacterial, archaeal, and fungal communities along an altitudinal gradient in alpine forest soils: what are the driving factors?, Microb. Ecol., 72, 207, 10.1007/s00248-016-0748-2
Stefanowicz, 2016, Species-specific effects of plant invasions on activity, biomass, and composition of soil microbial communities, Biol. Fertil. Soils, 52, 841, 10.1007/s00374-016-1122-8
Steinauer, 2015, Plant diversity effects on soil microbial functions and enzymes are stronger than warming in a grassland experiment, Ecology, 96, 99, 10.1890/14-0088.1
Swift, 1979, 372
Talbot, 2014, Endemism and functional convergence across the North American soil mycobiome, Proc. Natl. Acad. Sci., 111, 6341, 10.1073/pnas.1402584111
van Der Heijden, 2008, The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems, Ecol. Lett., 11, 296, 10.1111/j.1461-0248.2007.01139.x
Vance, 1987, An extraction method for measuring soil microbial biomass C, Soil Biol. Biochem., 19, 703, 10.1016/0038-0717(87)90052-6
Wang, 2007, Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy, Appl. Environ. Microbiol., 73, 5261, 10.1128/AEM.00062-07
Williams, 1972, Nitrogen mineralization and organic matter decomposition in Scots pine humus, Forestry, 45, 177, 10.1093/forestry/45.2.177
Yuan, 2012, Soil microbial and enzymatic activities across a chronosequence of Chinese Pine plantation development on the loess plateau of China, Pedosphere, 22, 1, 10.1016/S1002-0160(11)60186-0
Zhang, 2016, Soil bacterial community dynamics reflect changes in plant community and soil properties during the secondary succession of abandoned farmland in the Loess Plateau, Soil Biol. Biochem., 97, 40, 10.1016/j.soilbio.2016.02.013
Zhang, 2018, Relationship between soil nutrient properties and biological activities along a restoration chronosequence of Pinus tabulaeformis plantation forests in the Ziwuling Mountains, China, Catena, 161, 85, 10.1016/j.catena.2017.10.021
Zhong, 2019, Effects of land use change on organic carbon dynamics associated with soil aggregate fractions on the Loess Plateau, China, Land Degrad. Dev., 30, 1070, 10.1002/ldr.3294
