Dynamics of DNA in vitro evolution
Tài liệu tham khảo
Darwin, 1859
Bishop, 1967, The mechanism of replication: a novel polarity reversal in the in vitro synthesis of Q-beta-RNA and its complement, Proc Natl Acad Sci USA, 58, 1790, 10.1073/pnas.58.4.1790
Tuerk, 1990, Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase, Science, 249, 505, 10.1126/science.2200121
He, 1996, In vitro evolution of the DNA binding sites of Escherichia coli methionine repressor, MetJ J Mol Biol, 255, 55, 10.1006/jmbi.1996.0006
Hanes, 1997, In vitro selection and evolution functional proteins by using ribosome display, Proc Natl Acad Sci USA, 94, 4937, 10.1073/pnas.94.10.4937
Keefe, 2001, Functional proteins from a random-sequence library, Nature, 410, 715, 10.1038/35070613
Matsuura, 2006, In vitro evolution of proteins, J Biosci Bioeng, 101, 449, 10.1263/jbb.101.449
Joyce, 2004, Directed evolution of nucleic acid enzymes, Annu Rev Biochem, 73, 791, 10.1146/annurev.biochem.73.011303.073717
Bartel, 1993, Isolation of new ribozymes from a large pool of random sequences, Science, 261, 1411, 10.1126/science.7690155
Schlosser, 2005, Diverse evolutionary trajectories characterize a community of RNA-cleaving deoxyribozymes: a case study into the population dynamics of in vitro selection, J Mol Evol, 61, 192, 10.1007/s00239-004-0346-7
Dubertret, 2001, Dynamics of DNA-protein interaction deduced from in vitro DNA evolution, Phys Rev Lett, 86, 6022, 10.1103/PhysRevLett.86.6022
Yang, 2003, Dynamics of DNA in vitro evolution with Mnt-repressor: simulations and analysis, Phys Rev E, 68, 0319031, 10.1103/PhysRevE.68.031903
von Hippel, 2004, Completing the view of transcriptional regulation, Science, 305, 350, 10.1126/science.1101270
Spolar, 1994, Coupling of local folding to site-specific binding of proteins to DNA, Science, 263, 777, 10.1126/science.8303294
Lesser, 1990, The energetic basis of specificity in the Eco RI endonuclease – DNA interaction, Science, 250, 776, 10.1126/science.2237428
Peng, 2003, Dynamics of competitive evolution on a smooth landscape, Phys Rev Lett, 90, 0881031, 10.1103/PhysRevLett.90.088103
Fisher, 1999
Kloster, 2004, Simulation and analysis of in vitro DNA evolution, Phys Rev Lett, 92, 038101, 10.1103/PhysRevLett.92.038101