Drought stress-mediated alterations in secondary metabolites and biosynthetic gene expression in cumin plants: Insights from gene-specific and metabolite-level analyses

Plant Stress - Tập 10 - Trang 100241 - 2023
Sepideh Ghasemi1, Hassan Hassani Kumleh1, Mojtaba Kordrostami2, Mohammad Hossein Rezadoost1
1Department of Agricultural Biotechnology, Faculty of Agricultural Sciences, University of Guilan, Rasht, Iran
2Department of Plant Breeding, Nuclear Agriculture Research School, Nuclear Science and Technology Research Institute (NSTRI), Karaj, Iran

Tài liệu tham khảo

Adhikari, 2018, System of crop intensification for more productive, resource-conserving, climate-resilient, and sustainable agriculture: experience with diverse crops in varying agroecologies, Int. J. Agric. Sustain., 16, 1, 10.1080/14735903.2017.1402504 Agati, 2007, Chloroplast-located flavonoids can scavenge singlet oxygen, New Phytol., 174, 77, 10.1111/j.1469-8137.2007.01986.x Ahmed, 2021, Responses of a hot spring cyanobacterium under ultraviolet and photosynthetically active radiation: photosynthetic performance, antioxidative enzymes, mycosporine-like amino acid profiling and its antioxidative potentials, 3 Biotech, 11, 10, 10.1007/s13205-020-02562-1 Akhi, 2021, Role of secondary metabolites to attenuate stress damages in plants AlKahtani, 2021, Evaluation of silicon and proline application on the oxidative machinery in drought-stressed sugar beet, Antioxidants,, 10, 398, 10.3390/antiox10030398 Babaee, 2010, Water deficit effect on morphology, prolin content and thymol percentage of Thyme (Thymus vulgaris L.), Iran. J. Med. Aromat. Plants Res., 26, 239 Baghizadeh, 2021, Screening of Iranian Cumin (Cuminum cyminum L.) ecotypes under normal moisture and drought conditions using tolerance indices, Ethno Pharm. Prod., 2, 17 Barton, 2017, Future directions in the ontogeny of plant defence: understanding the evolutionary causes and consequences, Ecol. Lett., 20, 403, 10.1111/ele.12744 Basyuni, 2009, Expression of terpenoid synthase mRNA and terpenoid content in salt stressed mangrove, J. Plant Physiol., 166, 1786, 10.1016/j.jplph.2009.05.008 Bettaieb, 2011, Essential oils and fatty acids composition of Tunisian and Indian cumin (Cuminum cyminum L.) seeds: a comparative study, J. Sci. Food Agric., 91, 2100, 10.1002/jsfa.4513 Bhargava, 2013, Drought stress adaptation: metabolic adjustment and regulation of gene expression, Plant Breed., 132, 21, 10.1111/pbr.12004 Blokhina, 2003, Antioxidants, oxidative damage and oxygen deprivation stress: a review, Ann. Bot., 91, 179, 10.1093/aob/mcf118 Bodaghi, 2016, Comparison the essential oil of two local ecotypes of Cuminum cyminum L. under drought stress Breeze, 2011, High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation, Plant Cell, 23, 873, 10.1105/tpc.111.083345 Chen, 2014, In vitro comparison of antioxidant capacity of cumin (Cuminum cyminum L.) oils and their main components, LWT Food Sci. Technol., 55, 632, 10.1016/j.lwt.2013.09.017 Chun, 2003, Superoxide radical scavenging activity of the major polyphenols in fresh plums, J. Agric. Food Chem., 51, 8067, 10.1021/jf034740d Chunyan, 2022, Ionomic and metabolic responses of wheat seedlings to PEG-6000-simulated drought stress under two phosphorus levels, PLoS One, 17, 10.1371/journal.pone.0274915 Collins, 2022, Tomatoes: an extensive review of the associated health impacts of tomatoes and factors that can affect their cultivation, Biology, 11, 239, 10.3390/biology11020239 Crocoll, 2011 Danilevskaya, 2019, Developmental and transcriptional responses of maize to drought stress under field conditions, Plant Direct, 3, e00129, 10.1002/pld3.129 Darriet, 2007, Herbs, spices, and essential oils, 205 Dewanto, 2002, Thermal processing enhances the nutritional value of tomatoes by increasing total antioxidant activity, J. Agric. Food Chem., 50, 3010, 10.1021/jf0115589 Do, 2023, Impact of light and dark treatment on phenylpropanoid pathway genes, primary and secondary metabolites in Agastache rugosa transgenic hairy root cultures by overexpressing Arabidopsis transcription factor AtMYB12, Life, 13, 1042, 10.3390/life13041042 Estrada, 1999, Pungency level in fruits of the Padrón pepper with different water supply, Sci. Hortic., 81, 385, 10.1016/S0304-4238(99)00029-1 Facchini, 2001, Alkaloid biosynthesis in plants: biochemistry, cell biology, molecular regulation, and metabolic engineering applications, Annu. Rev. Plant Biol., 52, 29, 10.1146/annurev.arplant.52.1.29 Facchini, 2006, Regulation of alkaloid biosynthesis in plants, 63, 1 Fan, 2016, Molecular cloning and expression of 1-deoxy-d-xylulose-5-phosphate synthase and 1-deoxy-d-xylulose-5-phosphate reductoisomerase in Dendrobium officinale, Plant Cell Tissue Organ Cult. (PCTOC), 125, 381, 10.1007/s11240-016-0945-1 Ghasemi, 2019, Changes in the expression of some genes involved in the biosynthesis of secondary metabolites in Cuminum cyminum L. under UV stress, Protoplasma, 256, 279, 10.1007/s00709-018-1297-y Ghissing, 2020, Biology of floral scent volatiles in ornamental plants Ghorbanli, 2011, Effect of water deficit and its interaction with ascorbate on proline, soluble sugars, catalase and glutathione peroxidase amounts in Nigella sativa L, Iran. J. Med. Aromat. Plants, 26, 466 Giusti, 2001, Characterization and measurement of anthocyanins by UV-visible spectroscopy, Curr. Protoc. Food Anal. Chem., 1 Goldfinger, 2023, Metabolic engineering of the shikimate pathway in Amycolatopsis strains for optimized glycopeptide antibiotic production, Metab. Eng., 78, 84, 10.1016/j.ymben.2023.05.005 Gong, 2022, The central circadian clock protein TaCCA1 regulates seedling growth and spike development in wheat (Triticum aestivum L.), Front. Plant Sci., 13, 10.3389/fpls.2022.946213 Gowtham, 2022, Insight into recent progress and perspectives in improvement of antioxidant machinery upon PGPR augmentation in plants under drought stress: a review, Antioxidants, 11, 1763, 10.3390/antiox11091763 Gupta, 2021, Biosynthesis and extraction of high-value carotenoid from algae, Front. Biosci. Landmark, 26, 171, 10.52586/4932 Hanano, 2008, A systematic survey in Arabidopsis thaliana of transcription factors that modulate circadian parameters, BMC Genom., 9, 1, 10.1186/1471-2164-9-182 Hasanuzzaman, 2020, Reactive oxygen species and antioxidant defense in plants under abiotic stress: revisiting the crucial role of a universal defense regulator, Antioxidants, 9, 681, 10.3390/antiox9080681 Herrmann, 1999, The shikimate pathway, Annu. Rev. Plant Biol., 50, 473, 10.1146/annurev.arplant.50.1.473 Homer, 1994, Cultivation of sweet marjoram, Marjorana hortensis, in newly reclaimed lands of Egypt, J. Herbs Spices Med. Plants, 2, 9, 10.1300/J044v02n02_03 Indumathi, 2014, Estimation of terpenoid content and its antimicrobial property in Enicostemma litorrale, Int. J. ChemTech Res., 6, 4264 Jafarzadeh, 2014, The study of drought stress and Bio fertilizer of nitrogen on some biochemical traits of Marigold medicinal plant (Calendula officinalis L.), J. Plant Res. Iran. J. Biol., 27, 180 Kordrostami, 2019, Oxidative stress in plants: production, metabolism, and biological roles of reactive oxygen species, 85 Kumari, 2023, Strategies for conservation and production of bioactive phytoconstituents in commercially important ocimum species: a review Liu, 2017, Antibacterial and antifungal activities of spices, Int. J. Mol. Sci., 18, 1283, 10.3390/ijms18061283 Livak, 2001, Analysis of relative gene expression data using real-time quantitative PCR and the 2− ΔΔCT method, Methods, 25, 402, 10.1006/meth.2001.1262 Lyu, 2022, Biotechnological advances for improving natural pigment production: a state-of-the-art review, Bioresour. Bioprocess., 9, 1, 10.1186/s40643-022-00497-4 Mabou, 2021, Terpenes: structural classification and biological activities, IOSR J Pharm Biol Sci, 16, 25 Mafakheri, 2020, Role of molecular tools and biotechnology in climate-resilient agriculture //Hasanuzzaman Mirza, 491 Mafakheri, 2021, Plant abiotic stress tolerance mechanisms, Nanobiotechnology, 29, 10.1007/978-3-030-73606-4_2 Mahdavi, 2020, Variation in terpene profiles of Thymus vulgaris in water deficit stress response, Molecules, 25, 1091, 10.3390/molecules25051091 Méteignier, 2023, Emerging mechanistic insights into the regulation of specialized metabolism in plants, Nat. Plants, 9, 22, 10.1038/s41477-022-01288-7 Milborrow, 2001, The pathway of biosynthesis of abscisic acid in vascular plants: a review of the present state of knowledge of ABA biosynthesis, J. Exp. Bot., 52, 1145, 10.1093/jexbot/52.359.1145 Mohammadpour, 2015, Effects of drought stress and biofertilizers inoculation on growth, essential oil yield and constituents of thyme (Thymus vulgaris L.), J. AgroEcol., 7, 237 Morelló, 2005, Evaluation of l-phenylalanine ammonia-lyase activity and phenolic profile in olive drupe (Olea europaea L.) from fruit setting period to harvesting time, Plant Sci., 168, 65, 10.1016/j.plantsci.2004.07.013 Motamedi-Mirhosseini, 2021, A study of response of Cumin (Cuminum cyminum L.) Landraces to drought stress, Afr. J. Agric. Econ. Rural Dev. ISSN, 9, 001 Mutlu-Ingok, 2020, Antibacterial, antifungal, antimycotoxigenic, and antioxidant activities of essential oils: an updated review, Molecules, 25, 4711, 10.3390/molecules25204711 Nabhan, 2014 Nagata, 1992, Simple method for simultaneous determination of chlorophyll and carotenoids in tomato fruit, Nippon Shokuhin Kogyo Gakkaishi, 39, 925, 10.3136/nskkk1962.39.925 Nandy, 2022, Role of polyamines in molecular regulation and cross-talks against drought tolerance in plants, J. Plant Growth Regul., 42, 4901, 10.1007/s00344-022-10802-2 Nassan, 2015, Effect of clove and cinnamon extracts on experimental model of acute hematogenous pyelonephritis in albino rats: immunopathological and antimicrobial study, Int. J. Immunopathol. Pharmacol., 28, 60, 10.1177/0394632015572075 Omer, 1999, Response of wild Egyptian oregano to nitrogen fertilization in a sandy soil, J. Plant Nutr., 22, 103, 10.1080/01904169909365610 Paeizi, 2018, Changes in medicinal alkaloids production and expression of related regulatory and biosynthetic genes in response to silver nitrate combined with methyl jasmonate in Catharanthus roseus in vitro propagated shoots, Plant Physiol. Biochem., 132, 623, 10.1016/j.plaphy.2018.10.015 Pandey, 2016, In planta transformed cumin (Cuminum cyminum L.) plants, overexpressing the SbNHX1 gene showed enhanced salt endurance, PLoS One, 11, 10.1371/journal.pone.0159349 Parker, 1987, Turnover of HMG CoA reductase is influenced by phosphorylation, 9 Patel, 2015, Spectrophotometric method for the estimation of total alkaloids in the Tinospora cordifolia M. and its herbal formulations, Int. J. Pharm. Pharm. Sci., 7, 249 Qiao, 2021, An update on the function, biosynthesis and regulation of floral volatile terpenoids, Horticulturae, 7, 451, 10.3390/horticulturae7110451 Rahimi, 2021, Antioxidant gene expression analysis and evaluation of total phenol content and oxygen-scavenging system in tea accessions under normal and drought stress conditions, BMC Plant Biol., 21, 1, 10.1186/s12870-021-03275-0 Rahimi, 2019, Evaluation of tea (Camellia sinensis L.) biochemical traits in normal and drought stress conditions to identify drought tolerant clones, Physiol. Mol. Biol. Plants, 25, 59, 10.1007/s12298-018-0564-x Ramak, 2014, Biosynthesis, regulation and properties of plant monoterpenoids, J. Med. Plants Res., 8, 983, 10.5897/JMPR2012.387 Rana, 2022, Health benefits of polyphenols: a concise review, J. Food Biochem., 46, e14264, 10.1111/jfbc.14264 Riaz, 2021, A comprehensive review on emerging importance and economical potential of medicinal and aromatic plants (MAPs) in current scenario, Pak. J. Agric. Res., 34, 381 Sairam, 2000, Oxidative stress and antioxidants in wheat genotypes: possible mechanism of water stress tolerance, J. Agro. Crop Sci., 184, 55, 10.1046/j.1439-037x.2000.00358.x Selmar, 2013, Influencing the product quality by deliberately applying drought stress during the cultivation of medicinal plants, Ind. Crops Prod., 42, 558, 10.1016/j.indcrop.2012.06.020 Seyoum, 2006, Structure–radical scavenging activity relationships of flavonoids, Phytochemistry, 67, 2058, 10.1016/j.phytochem.2006.07.002 Shariat, 2018, Metabolite profiling and molecular responses in a drought-tolerant savory, Satureja rechingeri exposed to water deficit, 3 Biotech, 8, 1, 10.1007/s13205-018-1491-9 Simioni, 2018, Oxidative stress: role of physical exercise and antioxidant nutraceuticals in adulthood and aging, Oncotarget, 9, 17181, 10.18632/oncotarget.24729 Singh, 2017, Cuminum cyminum–A popular spice: an updated review, Pharmacogn. J., 9, 292, 10.5530/pj.2017.3.51 Sperdouli, 2012, Interaction of proline, sugars, and anthocyanins during photosynthetic acclimation of Arabidopsis thaliana to drought stress, J. Plant Physiol., 169, 577, 10.1016/j.jplph.2011.12.015 Tahkokorpi, 2010, Anthocyanins under drought and drought-related stresses in bilberry (Vaccinium myrtillus L.), Acta Universitatis Ouluensis: A Scientiae Rerum Naturalium, 556, 1 Tang, 2022, Physio-morphological, biochemical and transcriptomic analyses provide insights into drought stress responses in Mesona chinensis Benth, Front. Plant Sci., 13 Tátrai, 2016, Morphological and physiological plant responses to drought stress in Thymus citriodorus, Int. J. Agron., 2016, 10.1155/2016/4165750 Tohge, 2013, The evolution of phenylpropanoid metabolism in the green lineage, Crit. Rev. Biochem. Mol. Biol., 48, 123, 10.3109/10409238.2012.758083 Tsormpatsidis, 2010, The influence of ultraviolet radiation on growth, photosynthesis and phenolic levels of green and red lettuce: potential for exploiting effects of ultraviolet radiation in a production system, Ann. Appl. Biol., 156, 357, 10.1111/j.1744-7348.2010.00393.x Türkan, 2005, Differential responses of lipid peroxidation and antioxidants in the leaves of drought-tolerant P. acutifolius Gray and drought-sensitive P. vulgaris L. subjected to polyethylene glycol mediated water stress, Plant Sci., 168, 223, 10.1016/j.plantsci.2004.07.032 Turtola, 2003, Drought stress alters the concentration of wood terpenoids in Scots pine and Norway spruce seedlings, J. Chem. Ecol., 29, 1981, 10.1023/A:1025674116183 Tzin, 2010, New insights into the shikimate and aromatic amino acids biosynthesis pathways in plants, Mol. Plant, 3, 956, 10.1093/mp/ssq048 Wahab, 2022, Plants’ physio-biochemical and phyto-hormonal responses to alleviate the adverse effects of drought stress: a comprehensive review, Plants, 11, 1620, 10.3390/plants11131620 Waterman, 2019, Extrinsic factors influencing production of secondary metabolites in plants, 107 Watkinson, 2006, Accessions of Solanum tuberosum ssp. andigena show differences in photosynthetic recovery after drought stress as reflected in gene expression profiles, Plant Sci., 171, 745, 10.1016/j.plantsci.2006.07.010 Weaver, 1997, Dynamics of the shikimate pathway in plants, Trends Plant Sci., 2, 346, 10.1016/S1360-1385(97)84622-5 Wei, 2019, Overexpression of PtDXS enhances stress resistance in Poplars, Int. J. Mol. Sci., 20, 1669, 10.3390/ijms20071669 Windram, 2012, Arabidopsis defense against Botrytis cinerea: chronology and regulation deciphered by high-resolution temporal transcriptomic analysis, Plant Cell, 24, 3530, 10.1105/tpc.112.102046 Wrolstad, 1993, Color and pigment analyses in fruit products. Oregon St, Univ Agric Exp Stn Bull, 624, 1 Zhishen, 1999, The determination of flavonoid contents in mulberry and their scavenging effects on superoxide radicals, Food Chem., 64, 555, 10.1016/S0308-8146(98)00102-2