Diversity, resource utilization, and phenology of fruiting bodies of litter-decomposing macrofungi in subtropical, temperate, and subalpine forests

Arnold AE, Lutzoni F (2007) Diversity and host range of foliar endophytes: are tropical leaves biodiversity hotspots? Ecology 88:541–549 Bağci E, Diğrak M (1996) Antimicrobial activity of essential oils of some Abies (Fir) species from Turkey. Flavour Fragr J 11:251–256 Berg B (1986) Nutrient release from litter and humus in coniferous forest soils—a mini review. Scand J For Res 1:359–369 Brunner I, Brunner F, Laursen GA (1992) Characterization and comparison of macrofungal communities in an Alnus tenuifolia and an Alnus crispa forest in Alaska. Can J Bot 70:1247–1258 Camacho C, Coulouris G, Avagyan V, Ma N, Papadopoulos J, Bealer K, Madden TL (2009) BLAST+: architecture and applications. BMC Bioinf 10:421 Cowell RK, Coddington JA (1994) Estimating terrestrial biodiversity through extrapolation. Phil Trans R Soc B 345:101–118 Fukasawa Y, Katsumata S, Mori AS, Osono T, Takeda H (2014) Accumulation and decay dynamics of coarse woody debris in a Japanese old-growth subalpine coniferous forest. Ecol Res 29:257–269 Gates GM, Mohammed C, Wardlaw T, Davidson NJ, Ratkowsky DA (2011) Diversity and phenology of the macrofungal assemblages supported by litter in a tall, wet Eucalyptus obliqua forest in southern Tasmania, Australia. Fungal Ecol 4:68–75 Gómez-Hernández M, Williams-Linera G, Guevara R, Lodge DJ (2012) Patterns of macromycete community assemblage along an elevation gradient: options for fungal gradient and metacommunity analyses. Biodivers Conserv 21:2247–2268 Hansen PA, Tyler G (1992) Statistical evaluation of tree species affinity and soil preference of the macrofungal flora in south Swedish beech, oak and hornbeam forest. Crypt Bot 2:355–361 Hintikka V (1988) On the macromycete flora in oligotrophic pine forests of different ages in south Finland. Acta Bot Fennica 136:89–94 Hirose D, Osono T (2006) Development and seasonal variations of Lophodermium populations on Pinus thunbergii needle litter. Mycoscience 47:242–247 Hongo T (1994) Fungi. Yama to KeikokuSha, Tokyo (in Japanese) Hyodo F, Tayasu I, Wada E (2006) Estimation of the longevity of C in terrestrial detrital food webs using radiocarbon (14C): how old are diets in termites? Funct Ecol 20:385–393 Ikeda A, Matsuoka S, Masuya H, Mori AS, Hirose D, Osono T (2014) Comparison of the diversity, composition, and host recurrence of xylariaceous endophytes in subtropical, cool temperate, and subboreal regions in Japan. Popul Ecol 56:289–300 Imazeki R, Hongo T (1987) Colored illustration of Mushrooms of Japan, vol I. Hoikusha, Tokyo (in Japanese) Imazeki R, Hongo T (1989) Colored illustration of Mushrooms of Japan, vol II. Hoikusha, Tokyo (in Japanese) Imazeki R, Otani Y, Hongo T (1988) Fungi of Japan. Yama to KeikokuSha, Tokyo (in Japanese) Lange M (1993) Maromycetes under twelve tree species in ten plantations on various soil types in Denmark. Oper Bot 120:1–53 Levin I, Kromer B (1997) Twenty years of atmospheric 14CO2 observations at Schauinsland station, Germany. Radiocarbon 39:205–218 López-Quintero CA, Straatsma G, Franco-Molano AE, Boekhout T (2012) Macrofungal diversity in Colombian Amazon forests varies with regions and regimes of disturbance. Biodivers Conserv 21:2221–2243 Miyamoto T, Igarashi T, Takahashi K (2000) Lignin-degrading ability of litter-decomposing basidiomycetes from Picea forests of Hokkaido. Mycoscience 41:105–110 Mori A, Takeda H (2004) Functional relationships between crown morphology and within-crown characteristics of understory saplings of three codominant conifers in a subalpine forest in central Japan. Tree Physiol 24:661–670 Mueller GM, Schmit JP, Leacock PR, Buyck B, Cifuentes J, Desjardin DE, Halling RE, Hjortstam K, Iturriaga T, Larsson KH, Lodge DJ, May TW, Minter D, Rajchenberg M, Redhead SA, Ryvarden L, Trappe JM, Watling R, Wu Q (2007) Global diversity and distribution of macrofungi. Biodivers Conserv 16:37–48 Murakami Y (1989) Spatial changes of species composition and seasonal fruiting of the Agaricales in Castanopsis cuspidata forest. Trans Mycol Soc Jpn 30:89–103 O’Donnell K (1993) Fusarium and its near relatives. In: Reynolds DR, Taylor JW (eds) The fungal holomorph: mitotic, meiotic and pleomorphic speciation in fungal systematics. CAB International, Wallingford, pp 225–233 O’Hanlon R, Harrington TJ (2012) Macrofungal diversity and ecology in four Irish forest type. Fungal Ecol 5:499–508 Okabe H (1983) Mycosociological research of Agaricales in natural forests (II) seasonal changes on each stand and life form. Bull Kyoto Univ For 53:20–32 (in Japanese with English abstract) Okabe H (1986) Ecological study of distribution of fungi within forests. PhD thesis, Kyoto University, Kyoto (in Japanese) Oksanen J (2013) Multivariate analysis of ecological communities in R: vegan tutorial. http://cc.oulu.fi/~jarioksa/opetus/metodi/vegantutor.pdf. Accessed 14 May 2014 Osono T (2007) Ecology of ligninolytic fungi associated with leaf litter decomposition. Ecol Res 22:955–974 Osono T (2011) Diversity and functioning of fungi associated with leaf litter decomposition in Asian forests of different climatic regions. Fungal Ecol 4:375–385 Osono T (2014) Hyphal length in the forest floor and soil of subtropical, temperate, and subalpine forests. J For Res (accepted for publication) Osono T, Hobara S, Fujiwara S, Koba K, Kameda K (2002) Abundance, diversity, and species composition of fungal communities in a temperate forest affected by excreta of the Great Cormorant Phalacrocorax carbo. Soil Biol Biochem 34:1537–1547 Osono T, Ono Y, Takeda H (2003) Fungal ingrowth on forest floor and decomposing needle litter of Chamaecyparis obtusa in relation to resource availability and moisture condition. Soil Biol Biochem 35:1423–1431 Osono T, Hobara S, Hishinuma T, Azuma JI (2011a) Selective lignin decomposition and nitrogen mineralization in forest litter colonized by Clitocybe sp. Eur J Soil Biol 47:114–121 Osono T, To-Anun C, Hagiwara Y, Hirose D (2011b) Decomposition of wood, petiole and leaf litter by Xylaria species from northern Thailand. Fungal Ecol 4:210–218 Outerbridge RAM (2002) Macrofungus ecology and diversity under different conifer monocultures on southern Vancouver Island. PhD thesis, University of Victoria Peterson SW (2000) Phylogenetic analysis of Penicillium species based on ITS and lsu-rDNA nucleotide sequences. In: Samson RA, Pitt JI (eds) Integration of modern taxonomic methods for Penicillium and Aspergillus classification. Harwood, Amsterdam, pp 163–178 Rastin N, Schlechte G, Hüttermann A (1990) Soil macrofungi and some soil biological, biochemical and chemical investigations on the upper and lower slope of a spruce forest. Soil Biol Biochem 22:1039–1047 Richard F, Moreau PA, Selosse MA, Gardes M (2004) Diversity and fruiting patterns of ectomycorrhizal and saprobic fungi in an old-growth Mediterranean forest dominated by Quercus ilex L. Can J Bot 82:1711–1729 R Development Core Team (2009) R: a language and environment for statistical computing. http://www.r-project.org/. Accessed 14 May 2014 Såstad SM (1995) Fungi—vegetation relationships in a Pinus sylvestris forest in central Norway. Can J Bot 73:807–816 Schmit JP, Murphy JF, Mueller GM (1999) Macrofungal diversity of a temperate oak forest: a test of species richness estimators. Can J Bot 77:1014–1027 Steffen KT, Cajthaml T, Šnajdr J, Baldrian P (2007) Differential degradation of oak (Quercus petraea) leaf litter by litter-decomposing basidiomycetes. Res Microbiol 158:447–455 Straatsma G, Ayer F, Egli S (2001) Species richness, abundance, and phenology of fungal fruit bodies over 21 years in a Swiss forest plot. Mycol Res 105:515–523 Takeda H, Kaneko N (1988) Patterns of soil humus accumulation in forests. I. Mull and moder types humus in a broad-leaved forest. Bull Kyoto Univ For 60:33–45 (in Japanese with English abstract) Tian X, Takeda H, Ando T (1997) Application of a rapid thin section method for observations on decomposing litter in mor humus form in a subalpine coniferous forest. Ecol Res 12:289–300 Tsukamoto J (1996) Soil macro-invertebrates and litter disappearance in a Japanese mixed deciduous forest and comparison with European deciduous forests and tropical rainforests. Ecol Res 11:35–50 Tyler G (1985) Macrofungal flora of Swedish beech forest related to soil organic matter and acidity characteristics. For Ecol Manag 10:13–29 Valášková V, Šnajdr J, Bittner B, Cajthaml T, Merhautová V, Hofrichter M, Baldrian P (2007) Production of lignocellulose-degrading enzymes and degradation of leaf litter by saprotrophic basidiomycetes isolated from a Quercus petraea forest. Soil Biol Biochem 39:2651–2660 Van der Wal A, Geydan TD, Kuyper TW, de Boer W (2013) A thready affair: linking fungal diversity and community dynamics to terrestrial decomposition processes. FEMS Microbiol Rev 37:477–494 Villeneuve N, Grandtner MM, Fortin JA (1989) Frequency and diversity of ectomycorrhizal and saprophytic macrofungi in the Laurentide Mountains of Quebec. Can J Bot 67:2616–2629 White TJ, Bruns T, Lee S, Taylor JW (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic Press, New York, pp 315–322 Xu X, Tokashiki Y, Enoki T, Hirata E (1998a) Characteristics of nutrient accumulation in forest floor under evergreen broadleaved forests in Okinawa Island. Sci Bull Fac Agric Univ Ryukyus 45:185–193 Xu X, Enoki T, Tokashiki Y, Hirata E (1998b) Litterfall and the nutrient returns in evergreen broadleaved forests in Northern Okinawa Island. Sci Bull Fac Agric Univ Ryukyus 45:195–208 Yamashita S, Hijii N (2004) Relationships between seasonal appearance and longevity of fruit bodies of Agaricales and meteorological factors in a Japanese red pine forest. J For Res 9:165–171