Diversity and interaction of common bacterial blight disease-causing bacteria (Xanthomonas spp.) with Phaseolus vulgaris L.

Buruchara, 2011, Development and delivery of bean varieties in Africa: the Pan-African Bean Research Alliance (PABRA) model, Afr. Crop. Sci. J., 19, 227 Boersma, 2015, Impact of common bacterial blight on the yield, seed weight and seed discoloration of different market classes of dry beans (Phaseolus vulgaris L.), Can. J. Plant Sci., 95, 703, 10.4141/cjps-2014-399 Miklas, 2017, Common bacterial blight resistance QTL BC420 and SU91 effect on seed yield, Crop Sci., 57, 802, 10.2135/cropsci2016.06.0557 Rodríguez De Luque, 2015, Major constraints and trends for common bean production and commercialization; establishing priorities for future research, Agron. Colomb., 32, 423, 10.15446/agron.colomb.v32n3.46052 Akhavan, 2013, Bean common bacterial blight: pathogen epiphytic life and effect of irrigation practices, Springerplus, 2, 41, 10.1186/2193-1801-2-41 Darrasse, 2007, Contamination of bean seeds by Xanthomonas axonopodis pv. phaseoli associated with low bacterial densities in the phyllosphere under field and greenhouse conditions, Eur. J. Plant Pathol., 119, 203, 10.1007/s10658-007-9164-2 Opio, 1992, Assessment of yield losses caused by common bacterial blight of beans in Uganda, vol. 35, 113 EFSA Panel on Plant Health (PLH), 2014, Scientific opinion on the pest categorisation of Xanthomonas axonopodis pv. phaseoli and Xanthomonas fuscans subsp. fuscans, EFSA J., 12, 3856, 10.2903/j.efsa.2014.3856 Darrasse, 2013, Genome sequence of Xanthomonas fuscans subsp. fuscans strain 4834-R reveals that flagellar motility is not a general feature of Xanthomonads, BMC Genomics, 14, 761, 10.1186/1471-2164-14-761 Vauterin, 1995, Reclassification of Xanthomonas, Int. J. Syst. Bacteriol., 45, 472, 10.1099/00207713-45-3-472 Alavi, 2008, Appl. Environ. Microbiol., 74, 3295, 10.1128/AEM.02507-07 Zamani, 2011, Genetic diversity of the common bacterial blight pathogen of bean, Xanthomonas axonopodis pv. phaseoli in Iran revealed by rep-PCR, World J. Microbiol. Biotechnol., 27, 2371, 10.1007/s11274-011-0705-7 López, 2006, Phenotypic and genetic diversity in strains of common blight bacteria (Xanthomonas campestris pv. phaseoli and X. campestris pv. phaseoli var. fuscans) in a secondary center of diversity of the common bean host suggests multiple introduction events, Phytopathology, 96, 1204, 10.1094/PHYTO-96-1204 Duncan, 2011, Interaction of common bacterial blight bacteria with disease resistance quantitative trait loci in common bean, Phytopathology, 101, 425, 10.1094/PHYTO-03-10-0095 Aritua, 2015, Genome sequencing reveals a new lineage associated with lablab bean and genetic exchange between Xanthomonas axonopodis pv. phaseoli and Xanthomonas fuscans subsp. fuscans, Front. Microbiol., 6, 1080, 10.3389/fmicb.2015.01080 Constantin, 2016, Genetic characterisation of strains named as Xanthomonas axonopodis pv. dieffenbachiae leads to a taxonomic revision of Xanthomonas genus, Plant Pathol., 65, 792, 10.1111/ppa.12461 Ryan, 2011, Pathogenomics of Xanthomonas: understanding bacterium–plant interactions, Nat. Rev. Microbiol., 9, 344, 10.1038/nrmicro2558 Garavaglia, 2010, A plant natriuretic peptide-like molecule of the pathogen Xanthomonas axonopodis pv. citri causes rapid changes in the proteome of its citrus host, BMC Plant Biol., 10, 51, 10.1186/1471-2229-10-51 Aritua, 2013, Transcriptional and microscopic analyses of citrus stem and root responses to Candidatus Liberibacter asiaticus infection, PLoS One, 8, 10.1371/journal.pone.0073742 Wang, 2012, Phytosterols play a key role in plant innate immunity against bacterial pathogens by regulating nutrient efflux into the apoplast, Plant Physiol., 158, 1789, 10.1104/pp.111.189217 Mutlu, 2008, Differential pathogenicity of Xanthomonas campestris pv. phaseoli and X. fuscans subsp. fuscans strains on bean genotypes with common blight resistance, Plant Dis., 92, 546, 10.1094/PDIS-92-4-0546 Opio, 1996, Pathogenic variation in Xanthomonas campestris pv. phaseoli, the causal agent of common bacterial blight in Phaseolus beans, Plant Pathol., 45, 1126, 10.1046/j.1365-3059.1996.d01-187.x Viteri, 2014, A new common bacterial blight resistance QTL in VAX 1 common bean and interaction of the new QTL, SAP6, and SU91 with bacterial strains, Crop Sci., 54, 1598, 10.2135/cropsci2014.01.0008 Alladassi, 2017, Inheritance of resistance to common bacterial blight in four selected common bean (Phaseolus vulgaris L.) genotypes, J. Plant Breed. Crop Sci., 9, 71 Fourie, 2011, Pathogenic and genetic variation in Xanthomonas axonopodis pv. phaseoli and its fuscans variant in Southern Africa, Afr. Crop. Sci. J., 19, 393 Vandemark, 2008, Genotyping with real-time PCR reveals recessive epistasis between independent QTL conferring resistance to common bacterial blight in dry bean, Theor. Appl. Genet., 117, 513, 10.1007/s00122-008-0795-2 Mutlu, 2005, Registration of common bacterial blight resistant pinto bean germplasm line ABCP-8, Crop Sci., 45, 806, 10.2135/cropsci2005.0806 Miklas, 2006, Registration of common bacterial blight resistant dark red kidney bean germplasm line USDK-CBB-15, Crop Sci., 46, 1005, 10.2135/cropsci2005.06-0110 Miklas, 2006, Registration of common bacterial blight resistant white kidney bean germplasm line USWK-CBB-17, Crop Sci., 46, 2338, 10.2135/cropsci2006.04.0246 Miklas, 2011, Registration of common bacterial blight resistant cranberry dry bean germplasm line USCR-CBB-20, J. Plant Regist., 5, 98, 10.3198/jpr2010.03.0124crg Viteri, 2014, Progress in breeding Andean common bean for resistance to common bacterial blight, Crop Sci., 54, 2084, 10.2135/cropsci2014.03.0177 Vandemark, 2009, Interactions between QTL SAP6 and SU91 on resistance to common bacterial blight in red kidney bean and pinto bean populations, Euphytica, 170, 371, 10.1007/s10681-009-0013-6 Rodrigues, 1999, Combining ability of Phaseolus vulgaris L. for resistance to common bacterial blight, Genet. Mol. Biol., 22, 571, 10.1590/S1415-47571999000400018 Shi, 2011, Identification of candidate genes associated with CBB resistance in common bean HR45 (Phaseolus vulgaris L.) using cDNA-AFLP, Mol. Biol. Rep., 38, 75, 10.1007/s11033-010-0079-1 Liu, 2015, UDP-Glucosyltransferase71C5, a major glucosyltransferase, mediates abscisic acid homeostasis in Arabidopsis, Plant Physiol., 167, 1659, 10.1104/pp.15.00053 Perry, 2013, A comparison of the molecular organization of genomic regions associated with resistance to common bacterial blight in two Phaseolus vulgaris genotypes, Front. Plant Sci., 4, 318, 10.3389/fpls.2013.00318 Cooper, 2015 Zhu, 2016, QTL and candidate genes associated with common bacterial blight resistance in the common bean cultivar Longyundou 5 from China, Crop J., 4, 344, 10.1016/j.cj.2016.06.009 Lobaton, 2018, Resequencing of common bean identifies regions of inter-gene pool introgression and provides comprehensive resources for molecular breeding, Plant Genomes, 11 Schmutz, 2014, A reference genome for common bean and genome-wide analysis of dual domestications, Nat. Genet., 46, 707, 10.1038/ng.3008