Diversity and antibiotic-producing potential of cultivable marine-derived actinomycetes from coastal sediments of Turkey

Springer Science and Business Media LLC - Tập 13 Số 8 - Trang 1493-1501 - 2013
Kadriye Özcan1, Semiha Çetinel Aksoy1, Şaban Orçun Kalkan1, Ataç Uzel1, E. Esin Hameş‐Kocabaş1, Erdal Bedіr1
1Ege University

Tóm tắt

Từ khóa


Tài liệu tham khảo

Anzai K, Nakashima T, Kuwahara N, Suzuki R, Ohfuku Y, Takeshita S, Ando K (2008) Actinomycete bacteria isolated from the sediments at coastal and offshore area of Nagasaki Prefecture, Japan: diversity and biological activity. J Biosci Bioeng 106:215–217

Alvan G, Edlund C, Heddini A (2011) The global need for effective antibiotics—a summary of plenary presentations. Drug Resist Update 14:70–76

Bérdy J (2005) Bioactive microbial metabolites. J Antibiot 58:1–26

Bredholdt H, Galatenko OA, Engelhardt K, Tjaervik E, Terekhova LP, Zotchev SB (2007) Rare actinomycete bacteria from the shallow water sediments of the Trondheim fjord, Norway: isolation, diversity and biological activity. Environ Microbiol 9:2756–2764

Bredholdt H, Tjaervik E, Johnsen G, Zotchev SB (2008) Actinomycetes from sediments in the Trondheim fjord, Norway: diversity and biological activity. Mar Drugs 6:12–24

Bull AT, Stach JEM (2007) Marine actinobacteria: new opportunities for natural product search and discovery. Trends Microbiol 15:491–499

CLSI (Clinical and Laboratory Standards) (2007) Performance standards for antimicrobial susceptibility testing. 17th Informational Supplement, M100-S17, 27:1

Eccleston GP, Brooks PR, Kurtböke DI (2008) The occurrence of bioactive Micromonosporae in aquatic habitats of the Sunshine Coast in Australia. Mar Drugs 6:243–261

Fenical W (2006) Developing a new resource for drug discovery: marine actinomycete bacteria. Nature 2:666–673

Goodfellow M, Williams ST (1983) Ecology of actinomycetes. Annu Rev Microbiol 37:189–216

Hames-Kocabas EE, Uzel A (2007) Alkaline protease production by an actinomycete MA1-1 isolated from marine sediments. Ann Microbiol 57:71–75

Hames-Kocabas EE, Uzel A (2012) Isolation strategies of marine-derived actinomycetes from sponge and sediment samples. J Microbiol Meth 88:342–347

Holt JG (ed) (1994) Bergey’s manual of determinative bacteriology, 9th edn. Williams & Wilkins, New York. ISBN 0-683-00603-7

Jensen PR, Dwight R, Fenical W (1991) Distribution of actinomycetes in near-shore tropical marine sediments. Appl Environ Microbiol 57:1102–1108

Jensen PR, Gontang E, Mafnas C, Mincer TJ, Fenical W (2005a) Culturable marine actinomycete diversity from tropical Pacific Ocean sediments. Environ Microbiol 7:1039–1048

Jensen PR, Mincer TJ, Williams PG, Fenical W (2005b) Marine actinomycete diversity and natural product discovery. Antonie Leeuwenhoek 87:43–48

Kim TK, Garson MJ, Fuerst JA (2005) Marine actinomycetes related to the “Salinispora” group from the Great Barrier Reef sponge Pseudoceratina clavata. Environ Microbiol 7:509–519

McCarthy AJ, Williams ST (1992) Actinomycetes as agents of biodegradation in the environment—a review. Gene 115:189–192

Meyers N, Mittermeier RA, Mittermeier CG, da Fonseca GAB, Kent J (2000) Biodiversity hotspots for conservation priorities. Nature 403:853–858

Mincer TJ, Jensen PR, Kauffman CA, Fenical W (2002) Widespread and persistent populations of a major new marine actinomycete taxon in ocean sediments. Appl Environ Microbiol 68:5005–5011

Moran MA, Rutherford LT, Hodson RE (1995) Evidence for indigenous streptomyces populations in a marine environment determined with a 16S rRNA probe. Appl Environ Microbiol 61:3695–3700

Mukku VJ, Speitling M, Laatsch H, Helmke E (2000) New butenolides from two marine Streptomycetes. J Nat Prod 63:1570–1572

Pukall R, Kramer I, Rohde M, Stackebrandt E (2001) Microbial diversity of cultivatable bacteria associated with the North Sea bryozoan Flustra foliacea. Syst Appl Microbiol 24:623–633

Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425

Tamura K, Nei M, Kumar S (2004) Prospects for inferring very large phylogenies by using the neighbor-joining method. PNAS (USA) 101:11030–11035

Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: Molecular Evolutionary Genetics Analysis [MEGA] software version 4.0. Mol Biol Evol 24:1596–1599

Wilkins K (1996) Volatile metabolites from actinomycetes. Chemosphere 32:1427–1434

Williams PG (2008) Panning for chemical gold: marine bacteria as a source of new therapeutics. Trends Biotechnol 27:45–52

You JL, Cao LX, Liu GF, Zhou SN, Tan HM, Lin YC (2005) Isolation and characterization of actinomycetes antagonistic to pathogenic Vibrio spp. from nearshore marine sediments. World J Microb Biot 21:679–682