Phân bố của các gen không gây bệnh avrA và popP1 trong 22 chủng phylotype I của Ralstonia solanacearum ở Nhật Bản

Alfano JR, Collmer A (2004) Type III secretion system effector proteins: double agents in bacterial disease and plant defense. Annu Rev Phytopathol 42:385–414 Brown JR (2003) Ancient horizontal gene transfer. Nat Rev Genet 4:121–132 Carney BF, Denny TP (1990) A cloned avirulence gene from Pseudomonas solanacearum determines incompatibility on Nicotiana tabacum at the host species level. J Bacteriol 172:4836–4843 Chisholm ST, Coaker G, Day B, Staskawicz BJ (2006) Host–microbe interactions: shaping the evolution of the plant immune response. Cell 124:803–814 Dangl JL, Jones JDG (2001) Plant pathogens and integrated defence responses to infection. Nature 411:826–833 Fegan M, Prior P (2005) How complex is the “Ralstonia solanacearum species complex”? In: Allen C, Prior P, Hayward AC (eds) Bacterial wilt disease and the Ralstonia solanacearum species complex. APS Press, St. Paul, pp 449–461 Gabriel DW, Allen C, Schell M, Denny TP, Greenberg JT, Duan YP, Flores-Cruz Z, Huang Q, Clifford JM, Presting G, Gonzalez ET, Reddy J, Elphinstone J, Swanson J, Yao J, Mulholland V, Liu L, Farmerie W, Patnaikuni M, Balogh B, Norman D, Alvarez A, Castillo JA, Jones J, Saddler G, Walunas T, Zhukov A, Mikhailova N (2006) Identification of open reading frames unique to a select agent: Ralstonia solanacearum race 3 biovar 2. Mol Plant Microbe Interact 19:69–79 Genin S, Boucher C (2004) Lessons learned from the genome analysis of Ralstonia solanacearum. Annu Rev Phytopathol 42:107–134 Gillings MR, Fahy P (1994) Genomic fingerprinting: towards a unified view of the Pseudomonas solanacearum species complex. In: Hayward AC, Hartman GL (eds) Bacterial wilt: the disease and its causative agent, Pseudomonas solanacearum. CAB International, Wallingford, pp 95–112 Hacker J, Kaper JB (2000) Pathogenicity islands and the evolution of microbes. Annu Rev Microbiol 54:641–679 Hayward AC (1991) Biology and epidemiology of bacterial wilt caused by Pseudomonas solanacearum. Annu Rev Phytopathol 29:65–87 Horita M, Tsuchiya K (2001) Genetic diversity of Japanese strains of Ralstonia solanacearum. Phytopathology 91:399–407 Horita M, Yano K, Tsuchiya K (2004) PCR-based specific detection of Ralstonia solanacearum race 4 strains. J Gen Plant Pathol 70:278–283 Kanda A, Ohnishi S, Tomiyama H, Hasegawa H, Yasukohchi M, Kiba A, Ohnishi K, Okuno T, Hikichi Y (2003) Type III secretion machinery-deficient mutants of Ralstonia solanacearum lose their ability to colonize resulting in loss of pathogenicity. J Gen Plant Pathol 69:250–257 Kiba A, Tomiyama H, Takahashi H, Hamada H, Ohnishi K, Okuno T, Hikichi Y (2003) Induction of resistance and expression of defense-related genes in tobacco leaves infiltrated with Ralstonia solanacearum. Plant Cell Physiol 44:287–295 Lavie M, Shillington E, Eguiluz C, Grimsley N, Boucher C (2002) PopP1, a new member of the YopJ/AvrRxv family of type III effector proteins, acts as a host-specificity factor and modulates aggressiveness of Ralstonia solanacearum. Mol Plant Microbe Interact 15:1058–1068 Lavie M, Seunes B, Prior P, Boucher C (2004) Distribution and sequence analysis of a family of type Ill-dependent effectors correlate with the phylogeny of Ralstonia solanacearum strains. Mol Plant Microbe Interact 17:931–940 Liu Y, Kanda A, Yano K, Kiba A, Hikichi Y, Aino M, Kawaguchi A, Mizoguchi S, Nakaho K, Shiomi H, Takikawa Y, Ohnishi K (2009) Molecular typing of Japanese strains of Ralstonia solanacearum in relation to the ability to induce a hypersensitive reaction in tobacco. J Gen Plant Pathol. doi:10.1007/s10327-009-0188-7 Mukaihara T, Tamura N, Murata Y, Iwabuchi M (2004) Genetic screening of Hrp type III-related pathogenicity genes controlled by the HrpB transcriptional activator in Ralstonia solanacearum. Mol Microbiol 54:863–875 Palleroni NJ, Doudoroff M (1971) Phenotypic characterization and deoxyribonucleic acid homologies of Pseudomonas solanacearum. J Bacteriol 107:690–696 Poueymiro M, Cunnac S, Barberis P, Deslandes L, Peeters N, Cazale-Noel AC, Boucher C, Genin S (2009) Two type III secretion system effectors from Ralstonia solanacearum GMI1000 determine host-range specificity on tobacco. Mol Plant Microbe Interact 22:538–550 Poussier S, Trigalet-Demery D, Vandewalle P, Goffinet B, Luisetti J, Trigalet A (2000) Genetic diversity of Ralstonia solanacearum as assessed by PCR–RFLP of the hrp gene region, AFLP and 16S rRNA sequence analysis, and identification of an African subdivision. Microbiology 146:1679–1692 Prior P, Fegan M (2005) Recent developments in the phylogeny and classification of Ralstonia solanacearum. Acta Hort 695:127–136 Robertson AE, Wechter WP, Denny TP, Fortnum BA, Kluepfel DA (2004) Relationship between avirulence gene (avrA) diversity in Ralstonia solanacearum and bacterial wilt incidence. Mol Plant Microbe Interact 17:1376–1384 Salanoubat M, Genin S, Artiguenave F, Gouzy J, Mangenot S, Arlat M, Billault A, Brottier P, Camus JC, Cattolico L, Chandler M, Choisne N, Claudel-Renard C, Cunnac S, Demange N, Gaspin C, Lavie M, Moisan A, Robert C, Saurin W, Schiex T, Siguier P, Thébault P, Whalen M, Wincker P, Levy M, Weissenbach J, Boucher CA (2002) Genome sequence of the plant pathogen Ralstonia solanacearum. Nature 415:497–502 Taghavi M, Hayward C, Sly LI, Fegan M (1996) Analysis of the phylogenetic relationships of strains of Burkholderia solanacearum, Pseudomonas syzygii, and the blood disease bacterium of banana based on 16S rRNA gene sequences. Int J Syst Bacteriol 46:10–15 Villa JE, Tsuchiya K, Horita M, Natural M, Opina N, Hyakumachi M (2005) Phylogenetic relationships of Ralstonia solanacearum species complex strains from Asia and other continents based on 16S rDNA, endoglucanase, and hrpB gene sequences. J Gen Plant Pathol 71:39–46 Wicker E, Grassart L, Coranson-Beaudu R, Mian D, Guilbaud C, Fegan M, Prior P (2007) Ralstonia solanacearum strains from Martinique (French West Indies) exhibiting a new pathogenic potential. Appl Environ Microbiol 73:6790–6801 Yabuuchi E, Kosako Y, Yano I, Hotta H, Nishiuchi Y (1995) Transfer of two Burkholderia, an Alcaligenes species to Ralstonia gen. Nov.: proposal of Ralstonia pickettii (Ralston, Palleroni Doudoroff 1973) comb. Nov., Ralstonia solanacearum (Smith 1896) comb. Nov. and Ralstonia eutropha (Davis 1969) comb. Nov. Microbiol Immunol 39:897–904