Discovery and validation of the prognostic value of the lncRNAs encoding snoRNAs in patients with clear cell renal cell carcinoma

Ramana, 2012, RCDB: Renal Cancer Gene Database., BMC Res Notes, 5, 246, 10.1186/1756-0500-5-246

Ficarra, 2017, Renal cell carcinoma., Nat Rev Dis Primers, 3, 17009, 10.1038/nrdp.2017.9

Motzer, 2017, Systemic Therapy for Metastatic Renal-Cell Carcinoma., N Engl J Med, 37, 354, 10.1056/NEJMra1601333

Kon, 2013, Integrated molecular analysis of clear-cell renal cell carcinoma., Nat Genet, 4, 860, 10.1038/ng.2699

Ricketts, 2013, The metabolic basis of kidney cancer., Semin Cancer Biol, 2, 46, 10.1016/j.semcancer.2012.06.002

Cheng, 2018, Chromosome 3p Loss-Orchestrated VHL, HIF, and Epigenetic Deregulation in Clear Cell Renal Cell Carcinoma., J Clin Oncol, 3, JCO2018792549, 10.1200/JCO.2018.79.2549

Reik, 2009, Evolution and functions of long noncoding RNAs., Cell, 13, 629, 10.1016/j.cell.2009.02.006

Huarte, 2015, The emerging role of lncRNAs in cancer., Nat Med, 2, 1253, 10.1038/nm.3981

Yang, 2018, Long Noncoding RNA in Cancer: Wiring Signaling Circuitry., Trends Cell Biol, 2, 287, 10.1016/j.tcb.2017.11.008

Mattick, 2009, Long non-coding RNAs: insights into functions., Nat Rev Genet, 1, 155, 10.1038/nrg2521

Wang, 2017, Long noncoding RNA MRCCAT1 promotes metastasis of clear cell renal cell carcinoma via inhibiting NPR3 and activating p38-MAPK signaling., Mol Cancer, 1, 111, 10.1186/s12943-017-0681-0

Xue, 2019, A positive feed-forward loop between LncRNA-URRCC and EGFL7/P-AKT/FOXO3 signaling promotes proliferation and metastasis of clear cell renal cell carcinoma., Mol Cancer, 1, 81, 10.1186/s12943-019-0998-y

Kiss, 1997, Function and synthesis of small nucleolar RNAs., Curr Opin Cell Biol, 9, 337, 10.1016/S0955-0674(97)80005-1

Scott, 2020, snoDB: an interactive database of human snoRNA sequences, abundance and interactions., Nucleic Acids Res, 4, D220, 10.1093/nar/gkz884

Kiss, 1996, Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs., Cell, 8, 1077, 10.1016/S0092-8674(00)81308-2

Jiang, 2010, Small nucleolar RNA signatures as biomarkers for non-small-cell lung cancer., Mol Cancer, 9, 198, 10.1186/1476-4598-9-198

Jenster, 2012, Diagnostic and prognostic signatures from the small non-coding RNA transcriptome in prostate cancer., Oncogene, 3, 978, 10.1038/onc.2011.304

Harris, 2011, The small-nucleolar RNAs commonly used for microRNA normalisation correlate with tumour pathology and prognosis., Br J Cancer, 10, 1168, 10.1038/sj.bjc.6606076

Goel, 2017, SNORA21 - An Oncogenic Small Nucleolar RNA, with a Prognostic Biomarker Potential in Human Colorectal Cancer., EBioMedicine, 2, 68, 10.1016/j.ebiom.2017.07.009

Goel, 2017, Clinical significance of SNORA42 as an oncogene and a prognostic biomarker in colorectal cancer., Gut, 6, 107, 10.1136/gutjnl-2015-309359

Li, 2019, Long noncoding RNA GAS5 inhibits progression of colorectal cancer by interacting with and triggering YAP phosphorylation and degradation and is negatively regulated by the mA reader YTHDF3., Mol Cancer, 1, 143, 10.1186/s12943-019-1079-y

Zhang, 2018, Long non-coding RNA SNHG15 interacts with and stabilizes transcription factor Slug and promotes colon cancer progression., Cancer Lett, 42, 78, 10.1016/j.canlet.2018.03.038

Wang, 2017, Long non-coding RNA SNHG20 promotes non-small cell lung cancer cell proliferation and migration by epigenetically silencing of P21 expression., Cell Death Dis, 8, e3092, 10.1038/cddis.2017.484

Rini, 2012, Novel agents in renal carcinoma: a reality check., Ther Adv Med Oncol, 4, 183, 10.1177/1758834012443725

Zhang, 2019, Novel long noncoding RNA OTUD6B-AS1 indicates poor prognosis and inhibits clear cell renal cell carcinoma proliferation via the Wnt/β-catenin signaling pathway., Mol Cancer, 1, 15, 10.1186/s12943-019-0942-1

Farzaneh, 2012, Are snoRNAs and snoRNA host genes new players in cancer?, Nat Rev Cancer, 1, 84, 10.1038/nrc3195

Volarević, 2018, Ribosome biogenesis in cancer: new players and therapeutic avenues., Nat Rev Cancer, 1, 51, 10.1038/nrc.2017.104

Wright, 2009, c-Myc induces changes in higher order rDNA structure on stimulation of quiescent cells., Oncogene, 2, 1833, 10.1038/onc.2009.21

Wang, 2018, The long noncoding RNA SNHG1 regulates colorectal cancer cell growth through interactions with EZH2 and miR-154-5p., Mol Cancer, 1, 141, 10.1186/s12943-018-0894-x

Sun, 2019, LncRNA SNHG1 contributes to sorafenib resistance by activating the Akt pathway and is positively regulated by miR-21 in hepatocellular carcinoma cells., J Exp Clin Cancer Res, 3, 183, 10.1186/s13046-019-1177-0

Wang, 2019, Gene Amplification-Driven Long Noncoding RNA SNHG17 Regulates Cell Proliferation and Migration in Human Non-Small-Cell Lung Cancer., Mol Ther Nucleic Acids, 1, 405, 10.1016/j.omtn.2019.06.008

Chan, 2019, Challenges and opportunities in the proteomic characterization of clear cell renal cell carcinoma (ccRCC): A critical step towards the personalized care of renal cancers., Semin Cancer Biol, 5, 8, 10.1016/j.semcancer.2018.06.004

Russo, 2006, Renal cell carcinoma recurrence after nephrectomy for localized disease: predicting survival from time of recurrence., J Clin Oncol, 2, 3101, 10.1200/JCO.2005.04.8280

Yuan, 2017, The long non-coding RNA SNHG3 functions as a competing endogenous RNA to promote malignant development of colorectal cancer., Oncol Rep, 3, 1402, 10.3892/or.2017.5837

Wang, 2018, Upregulation of SNHG3 expression associated with poor prognosis and enhances malignant progression of ovarian cancer., Cancer Biomark, 2, 367, 10.3233/CBM-170710

Chen, 2019, LncRNA SNHG3/miRNA-151a-3p/RAB22A axis regulates invasion and migration of osteosarcoma., Biomed Pharmacother, 11, 108695, 10.1016/j.biopha.2019.108695

Liu, 2016, SNHG3 correlates with malignant status and poor prognosis in hepatocellular carcinoma., Tumour Biol, 3, 2379, 10.1007/s13277-015-4052-4

Liu, 2019, LncRNA SNHG3 promotes clear cell renal cell carcinoma proliferation and migration by upregulating TOP2A., Exp Cell Res, 38, 111595, 10.1016/j.yexcr.2019.111595

Dong, 2019, Aberrant expression of long noncoding RNA SNHG15 correlates with liver metastasis and poor survival in colorectal cancer., J Cell Physiol, 23, 7032, 10.1002/jcp.27456

Zheng, 2018, LncRNA SNHG15 acts as a ceRNA to regulate YAP1-Hippo signaling pathway by sponging miR-200a-3p in papillary thyroid carcinoma., Cell Death Dis, 9, 947, 10.1038/s41419-018-0975-1

Zheng, 2017, LncRNA SNHG15 contributes to proliferation, invasion and autophagy in osteosarcoma cells by sponging miR-141., J Biomed Sci, 2, 46, 10.1186/s12929-017-0353-9

Huarte, 2019, SNHG15 is a bifunctional MYC-regulated noncoding locus encoding a lncRNA that promotes cell proliferation, invasion and drug resistance in colorectal cancer by interacting with AIF., J Exp Clin Cancer Res, 3, 172, 10.1186/s13046-019-1169-0

Yu, 2018, Knockdown of SNHG15 suppresses renal cell carcinoma proliferation and EMT by regulating the NF-κB signaling pathway., Int J Oncol, 5, 384, 10.3892/ijo.2018.4395

Keil, 2019, Sarcosine is a prostate epigenetic modifier that elicits aberrant methylation patterns through the SAMe-Dnmts axis., Mol Oncol, 1, 1002, 10.1002/1878-0261.12439

Alwers, 2019, Genome-wide DNA methylation differences according to oestrogen receptor beta status in colorectal cancer., Epigenetics, 1, 477, 10.1080/15592294.2019.1595998

Wang, 2019, Discovery and validation of DNA methylation markers for overall survival prognosis in patients with thymic epithelial tumors., Clin Epigenetics, 1, 38, 10.1186/s13148-019-0619-z

Jones, 2019, Epigenome-wide association study for lifetime estrogen exposure identifies an epigenetic signature associated with breast cancer risk., Clin Epigenetics, 1, 66, 10.1186/s13148-019-0664-7

Kim, 2019, Epigenetic regulation of mammalian Hedgehog signaling to the stroma determines the molecular subtype of bladder cancer., eLife, 8, 8, 10.7554/eLife.43024

Bohrer, 2019, DNA methylation at an enhancer of the three prime repair exonuclease 2 gene (TREX2) is linked to gene expression and survival in laryngeal cancer., Clin Epigenetics, 1, 67, 10.1186/s13148-019-0666-5

Ateeq, 2019, Epigenetic Silencing of miRNA-338-5p and miRNA-421 Drives SPINK1-Positive Prostate Cancer., Clin Cancer Res, 2, 2755, 10.1158/1078-0432.CCR-18-3230

Zhou, 2018, Downregulation of CLDN7 due to promoter hypermethylation is associated with human clear cell renal cell carcinoma progression and poor prognosis., J Exp Clin Cancer Res, 3, 276, 10.1186/s13046-018-0924-y