Discoveries and identification methods of metal oxalates in lichens and their mineral associations: A review of past studies and analytical options for lichenologists

Adamo, 1997, Iron oxides and hydroxides in the weathering interface between Stereocaulon vesuvianum and volcanic rock, Clay Miner., 32, 453, 10.1180/claymin.1997.032.3.07 Adamo, 1993, The weathering of mafic rocks by lichens, Lichenologist, 25, 285, 10.1006/lich.1993.1033 Adamo, 2002, Lichen-rock interactions and bioformation of minerals, Dev. Soil Sci., 28, 377 Adamo, 2000, Weathering of rocks and neogenesis of minerals associated with lichen activity, Appl. Clay Sci., 16, 229, 10.1016/S0169-1317(99)00056-3 Ascaso, 1982, The weathering of calcareous rocks by lichens, Pedobiologia, 24, 219, 10.1016/S0031-4056(23)05884-5 Ascaso, 1990, The weathering action of saxicolous lichens in maritime Antarctica, Polar Biol., 11, 33, 10.1007/BF00236519 Baran, 2014, Review: natural oxalates and their analogous synthetic complexes, J. Coord. Chem., 67, 3734, 10.1080/00958972.2014.937340 Baran, 2016, Natural iron oxalates and their analogous synthetic counterparts: a review, Geochemistry, 76, 449, 10.1016/j.chemer.2016.06.005 Baran, 2008, Oxalate biominerals, vol. 4, 219 Barman, 1992, Weathering of silicate minerals by organic acids. I. Nature of cation solubilisation, Geoderma, 53, 45, 10.1016/0016-7061(92)90020-8 Brown, 2013, Does aridity influence the morphology, distribution and accumulation of calcium oxalate crystals in Acacia (Leguminosae: mimosoideae)?, Plant Physiol. Biochem., 73, 219, 10.1016/j.plaphy.2013.10.006 Burford, 2003, Geomycology: fungi in mineral substrata, Mycologist, 17, 98, 10.1017/S0269915X03003112 Castro, 2008, Green copper pigments biodegradation in cultural heritage: from malachite to moolooite, thermodynamic modeling, X-ray fluorescence, and Raman evidence, Anal. Chem., 80, 4103, 10.1021/ac800255w Chen, 2000, Weathering of rocks induced by lichen colonization – a review, Catena, 39, 121, 10.1016/S0341-8162(99)00085-5 Chisholm, 1987, Hydrated copper oxalate, moolooite, in lichens, Mineral. Mag., 51, 715, 10.1180/minmag.1987.051.363.12 Czehura, 1977, A lichen indicator of copper mineralization, lights creek district, plumas county, California, Econ. Geol., 72, 796, 10.2113/gsecongeo.72.5.796 D'Antonio, 2009, Spectroscopic investigations of iron(II) and iron(III) oxalates, J. Braz. Chem. Soc., 20, 445, 10.1590/S0103-50532009000300006 Daudon, 2016, Respective influence of calcium and oxalate urine concentration on the formation of calcium oxalate monohydrate or dihydrate crystals, Compt. Rendus Chem., 19, 1504, 10.1016/j.crci.2016.08.009 Del Monte, 1987, The origin of calcium oxalates on historical buildings, monuments and natural outcrops, Sci. Total Environ., 67, 17, 10.1016/0048-9697(87)90063-5 De Oliveira, 2002, FT-Raman spectroscopy of three foliicolous lichens from Costa Rican rainforests, Lichenologist, 34, 259, 10.1006/lich.2002.0396 Dormaar, 1968, Infrared absorption spectra of mineral matter in saxicolous lichens and associated mosses, Can. J. Earth Sci., 5, 223, 10.1139/e68-023 Drever, 1997, The role of organic acids in mineral weathering, Colloids Surf., A, 120, 167, 10.1016/S0927-7757(96)03720-X Easton, 1997, Lichen-rock-mineral interactions: an overview, 209 Echigo, 2010, Crystal chemistry and genesis of organic minerals: a Review of oxalate and polycyclic aromatic hydrocarbon minerals, Can. Mineral., 48, 1329, 10.3749/canmin.48.5.1329 Edwards, 1991, Raman spectra of oxalates in lichen encrustations on Renaissance frescoes, Spectrochim. Acta, 47A, 1531, 10.1016/0584-8539(91)80247-G Edwards, 1993, Raman microscopy of lichen-substratum interfaces, J. Hattori Bot. Lab., 74, 303 Edwards, 2003, FT-Raman spectroscopy of lichens on dolomitic rocks: an assessment of metal oxalate formation, Analyst, 128, 1218, 10.1039/b306991p Elliott, 2019, Middlebackite, a new Cu oxalate mineral from Iron Monarch, South Australia: description and crystal structure, Mineral. Mag., 83, 427, 10.1180/mgm.2018.136 Farkaš, 2016, Massive excretion of calcium oxalate from late prepupal salivary glands of Drosophila melanogaster demonstrates active nephridial-like anion transport, Dev. Growth Differ., 58, 562, 10.1111/dgd.12300 Farmer, 1963, Occurrence of oxalates in soils clays following hydrogen peroxide treatment, Soil Sci., 96, 221, 10.1097/00010694-196310000-00001 Favero-Longo, 2005, Pedogenetic action of the lichens Lecidea atrobrunnea, Rhizocarpon geographicum gr. and Sporastatia testudinea on serpentinized ultramafic rocks in an alpine environment, Int. Biodeterior. Biodegrad., 56, 17, 10.1016/j.ibiod.2004.11.006 Favero-Longo, 2005, Chrysotile asbestos is progressively converted into a non-fibrous amorphous material by the chelating action of lichen metabolites, J. Environ. Monit., 7, 764, 10.1039/b507569f Favero-Longo, 2018, Diversity and functional traits of lichens in ultramafic areas: a literature-based worldwide analysis integrated by field data at the regional scale, Ecol. Res., 33, 593, 10.1007/s11284-018-1573-5 Frank-Kamenetskaya, 2019, Calcium oxalates in lichens on surface of apatite-nepheline ore (Kola Peninsula, Russia), Minerals, 9, 656, 10.3390/min9110656 Frank-Kamenetskaya, 2021, Copper oxalate formation by lichens and fungi, Sci. Rep., 11, 24239, 10.1038/s41598-021-03600-5 Friedmann, 1972, Calcium oxalate crystals in the aragonite-producing green alga Penicillus and related genera, Science, 177, 891, 10.1126/science.177.4052.891 Gadd, 2014, Oxalate production by fungi: significance in geomycology, biodeterioration and bioremediation, Fungal Biol. Rev., 28, 36, 10.1016/j.fbr.2014.05.001 Gehrmann, 1994, Interactions between epilithic and endolithic lichens and carbonate rocks, 22 Gehrmann, 1988, Lichen weathering activities on mineral and rock surfaces, Studia Geobotanica, 8, 33 Giordani, 2003, Determinant factors for the formation of the calcium oxalate minerals, weddellite and whewellite, on the surface of foliose lichens, Lichenologist, 35, 255, 10.1016/S0024-2829(03)00028-8 Holakooei, 2015, Micro-Raman spectroscopy and X-ray fluorescence spectrometry on the characterization of the Persian pigments used in the pre-seventeenth century wall paintings of Masjid-i Jāme of Abarqū, central Iran, Spectrochim. Acta, Part A, 134, 419, 10.1016/j.saa.2014.06.123 Ibarrondo, 2017, Biomineralization in saxicolous lichens: Raman spectroscopic study supported with XRF and SEM-EDX analyses, J. Raman Spectrosc., 48, 161, 10.1002/jrs.5015 Jackson, 1970, A comparative study of the role of lichens and “inorganic” processes in the chemical weathering of Recent Hawaiian lava flows, Am. J. Sci., 269, 446, 10.2475/ajs.269.5.446 Jones, 1981, Lichen weathering of rock-forming minerals: application of scanning electron microscopy and microprobe analysis, J. Microsc., 124, 95, 10.1111/j.1365-2818.1981.tb01309.x Jones, 1980, Weathering of a basalt by Pertusaria corallina, Lichenologist, 12, 277, 10.1017/S002428298000028X Khan, 2013, Animal models of calcium oxalate kidney stone formation, 483 Kuz’mina, 2019, The influence of inorganic and organic components of biofilms with microscopic fungi on the phase composition and morphology of crystallizing calcium oxalates, Crystallogr. Rep., 64, 161, 10.1134/S1063774519010176 Langdon, 2016, The osteopontin-controlled switching of calcium oxalate monohydrate morphologies in artificial urine provides insights into the formation of papillary kidney stones, Colloids Surf., B, 146, 296, 10.1016/j.colsurfb.2016.06.030 Lyu, 2021, Recent design and development of piezoelectric-actuated compliant microgrippers: a review, Sensor Actuator Phys., 113002, 10.1016/j.sna.2021.113002 McIlroy de la Rosa, 2013, Lichen-induced biomodification of calcareous surfaces: bioprotection versus biodeterioration, Prog. Phys. Geogr.: Earth Environ., 37, 325, 10.1177/0309133312467660 Mitchell, 1966, The thermal analysis of lichens growing on limestone, Analyst, 91, 783, 10.1039/an9669100783 Moscona, 1950, Studies of the egg of Bacillus libanicus (orthoptera, phasmidae) Part II, Quart. J. micro. Sci., 91, 195 Mossmann Koch, 2019, Selecting lichen functional traits as ecological indicators of the effects of urban environment, Sci. Total Environ., 654, 705, 10.1016/j.scitotenv.2018.11.107 Narula, 2016, Kidney stone matrix proteins ameliorate calcium oxalate monohydrate induced apoptotic injury to renal epithelial cells, Life Sci., 164, 23, 10.1016/j.lfs.2016.08.026 Pawlik-Skowrońska, 2006, Cellular mechanisms of Cu-tolerance in the epilithic lichen Lecanora polytropa growing at a copper mine, Lichenol., 38, 267, 10.1017/S0024282906005330 Piervittori, 1998, Literature on lichens and biodeterioration of stonework III, Lichenologist, 30, 263, 10.1006/lich.1998.0131 Piro, 2018, Crystal chemistry of organic minerals - salts of organic acids: the synthetic approach, Crystallogr. Rev., 24, 149, 10.1080/0889311X.2018.1445239 Pueschel, 1995, Calcium oxalate crystals in the red alga Antithamnion kylinii (Ceramiales): cytoplasmic and limited to indeterminate axes, Protoplasma, 189, 73, 10.1007/BF01280292 Purvis, 1984, The occurrence of copper oxalate in lichens growing on copper sulphide-bearing rocks in Scandinavia, Lichenologist, 16, 197, 10.1017/S0024282984000347 Purvis, 2014, Adaptation and interaction of saxicolous crustose lichens with metals. Purvis OW. Adaptation and interaction of saxicolous crustose lichens with metals, Bot. Stud., 55, 23, 10.1186/1999-3110-55-23 Purvis, 2011, Copper localization, elemental content, and thallus colour in the copper hyperaccumulator lichen Lecanora sierrae from California, Lichenol., 43, 165, 10.1017/S0024282910000770 Purvis, 2013, Iron localization in Acarospora colonizing schist on signy island, Antarct. Sci., 25, 24, 10.1017/S0954102012000582 Purvis, 1987, The occurrence of copper-norstictic acid in lichens from cupriferous substrata, Lichenologist, 19, 193, 10.1017/S0024282987000161 Purvis, 1996, A review of lichens in metal-enriched environments, Lichenol., 28, 571, 10.1006/lich.1996.0052 Purvis, 1985, Lichens of the Coniston copper mines, Lichenologist, 17, 221, 10.1017/S0024282985000299 Purvis, 2008, Mineral phases and element composition of the copper hyperaccumulator lichen Lecanora polytropa, Mineral. Mag., 72, 607, 10.1180/minmag.2008.072.2.607 Rola, 2016, Different heavy metal accumulation strategies of epilithic lichens colonising artificial post-smelting wastes, Arch. Environ. Contam. Toxicol., 70, 418, 10.1007/s00244-015-0180-5 Rusakov, 2016, The crystallization of calcium oxalate hydrates formed by interaction between microorganisms and minerals, 357 Russ, 1996, Origin of the whewellite-rich rock crust in the Lower Pecos Region of southwest Texas and its significance to paleoclimate reconstructions, Quat. Res., 46, 27, 10.1006/qres.1996.0041 Sambo, 1937, Sull'azione vicariante del magnesio invece del calcio in licheni calcicoli di roccia acalcica, G. Bot. Ital., 44, 246, 10.1080/11263503709437956 Sarret, 1998, Mechanisms of lichen resistance to metallic pollution, Environ. Sci. Technol., 32, 3325, 10.1021/es970718n Sazanova, 2020, Carbonate and oxalate crystallization by interaction of calcite marble with Bacillus subtilis and Bacillus subtilis–Aspergillus niger association, Crystals, 10, 756, 10.3390/cryst10090756 Schrader, 1996, Raman spectroscopy in the near infra-red - a most capable method of vibrational spectroscopy, Fresenius’ J. Anal. Chem., 355, 233, 10.1007/s0021663550233 Schrader, 1997, Die Möglichkeiten der Raman-Spektroskopie im Nah-Infrarot-Bereich.I, Chem. Unserer Zeit, 31, 229, 10.1002/ciuz.19970310504 Schrader, 1999, NIR-Raman spectroscopy in medicine and biology: results and aspects, J. Mol. Struct., 480–481, 21, 10.1016/S0022-2860(98)00650-4 Smith, 1921, xxviii+464 Syers, 1967, The calcium oxalate content of some lichens growing on limestone, Lichenol., 3, 409, 10.1017/S0024282967000416 Tuason, 2009, Calcium oxalate biomineralization by Piloderma fallax in response to various levels of calcium and phosphorus, Appl. Environ. Microbiol., 75, 7079, 10.1128/AEM.00325-09 Varadachari, 1994, Weathering of silicate minerals by organic acids: II. Nature of residual products, Geoderma, 61, 251, 10.1016/0016-7061(94)90052-3 Wadsten, 1985, Calcium oxalate hydrates on the surface of lichens, Lichenologist, 17, 239, 10.1017/S0024282985000305 Walter-Levy, 1971, 757 Weber, 1962, Environmental modification and the taxonomy of the crustose lichens, Sven. Bot. Tidskr., 56, 293 Wild, 1968, Geobotanical anomalies in Rhodesia. 1. The vegetation of copper-bearing rocks, Kirkia, 7, 1 Williamson, 1998, Application of X-ray element mapping across the lichen-rock interface, J. Microsc., 191, 91, 10.1046/j.1365-2818.1998.00350.x Wilson, 1984, The occurrence and significance of manganese oxalate in Pertusaria corallina (Lichenes), Pedobiologia, 26, 373, 10.1016/S0031-4056(23)05990-5 Wilson, 1981, The weathering of serpentinite by Lecanora atra, Lichenologist, 13, 167, 10.1017/S0024282981000212 Wilson, 1980, Glushinskite, a naturally occurring magnesium oxalate, Mineral. Mag., 43, 837, 10.1180/minmag.1980.043.331.02