Differential Reprogramming of Defense Network in Capsicum annum L. Plants Against Colletotrichum truncatum Infection by Phyllospheric and Rhizospheric Trichoderma Strains

Induction of defense response in host plants by the Trichoderma spp. has been attributed as one of the major mechanisms leading to inhibition of the pathogenic ingression. The present study sheds light on the mechanisms employed by the Trichoderma isolates, obtained from phyllosphere (BHUF4) and rhizosphere (T16A), to modulate the defense network of chili plant under Colletotrichum truncatum challenge. Plants treated with both the Trichoderma strains exhibited significant accumulation of phenols under C. truncatum challenge with maximum increment recorded for capsaicin (16.1-fold), ferulic acid (5.03-fold), quercetin (5.36-fold), salicylic acid (94.88-fold), and kaempeferol (6.22-fold). Phenol accumulation corresponded to the subsequent defense gene expression pattern. When compared to the pathogen-challenged control plants, enhanced expression of PR1, PIK1, CHI, GLU, Cdef, and SAR genes was recorded in the Trichoderma-treated plants acting as a biocontrol agent (BCA). The results of the present study suggest that to strengthen the defense pathways in the host plant, the mechanisms employed by Trichoderma isolates differ and depend upon their origin and site of application. While phyllospheric Trichoderma isolate (BHUF4) employed the systemic acquired resistance (SAR) pathway, the rhizospheric Trichoderma strain (T16A) used the induced systemic response (ISR) pathway for eliciting the defense response in the host plant under C. truncatum challenge. The study signifies how Trichoderma strains obtained from different origin and when applied at different sites in plant judiciously reprogram the defense network of the host plant to provide robust protection against phytopathogens. In the present case, overall protection is provided to the chili plants against the foliar or underground attack of C. truncatum.