Development of fluorescence in situ hybridization (FISH) probes to detect and enumerate Gambierdiscus species

Anderson, 2005, Identification and enumeration of Alexandrium spp. from the Gulf of Maine using molecular probes, Deep Sea Res. Part II: Top. Stud. Oceanogr., 52, 2467, 10.1016/j.dsr2.2005.06.015 Bates, 1998, Bloom dynamics and physiology of domoic-acid-producing Pseudo-nitzschia species, NATO ASI series G eco. Sci., 41, 267 Cembella, 1987, Variation in paralytic shellfish toxin composition within the Protogonyaulax tamaronsis/catenella species complex; red tide dinoflagellates, Biochem. Syst. Ecol., 15, 171, 10.1016/0305-1978(87)90018-4 Chateau-Degat, 2005, Seawater temperature, Gambierdiscus spp. variability and incidence of ciguatera poisoning in French Polynesia, Harmful Algae, 4, 1053, 10.1016/j.hal.2005.03.003 Chen, 2008, Development of rRNA and rDNA-targeted probes for fluorescence in situ hybridization to detect Heterosigma akashiwo (Raphidophyceae), J. Exp. Mar. Biol. Ecol., 355, 66, 10.1016/j.jembe.2007.12.012 Chen, 2013, Development of rRNA-targeted probes for detection of Prorocentrum micans (Dinophyceae) using whole cell in situ hybridization, J. Appl. Phycol., 25, 1077, 10.1007/s10811-012-9920-3 Chinain, 1999, Morphology and molecular analyses of three toxic species of Gambierdiscus (Dinophyceae): G. pacificus, sp. nov., G. australes, sp. nov., and G. polynesiensis, sp. nov, J. Phycol., 35, 1282, 10.1046/j.1529-8817.1999.3561282.x Chinain, 2010, Growth and toxin production in the ciguatera-causing dinoflagellate Gambierdiscus polynesiensis (Dinophyceae) in culture, Toxicon, 56, 739, 10.1016/j.toxicon.2009.06.013 Cruz-Rivera, 2006, Macroalgal palatability and the flux of ciguatera toxins through marine food webs, Harmful Algae, 5, 497, 10.1016/j.hal.2005.09.003 Fraga, 2014, Genus Gambierdiscus in the Canary Islands (NE Atlantic Ocean) with Description of Gambierdiscus silvae sp. nov., a new potentially toxic epiphytic benthic dinoflagellate, Ann. Anatomy, 165, 839 Fritz, 1985, A rapid simple technique utilizing calcofluor white M2R for the visualization of dinoflagellate thecal plates 1, J. Phycol., 21, 662, 10.1111/j.0022-3646.1985.00662.x Greenfield, 2006, Application of environmental sample processor (ESP) methodology for quantifying Pseudo-nitzschia australis using ribosomal RNA-targeted probes in sandwich and fluorescent in situ hybridization formats, Limnol. Oceanogr. Methods, 4, 426, 10.4319/lom.2006.4.426 Holmes, 1994, The origin of ciguatera in Platypus Bay, Australia, Memoirs-Queensland Museum, 34, 505 John, 2005, Development of specific rRNA probes to distinguish between geographic clades of the Alexandrium tamarense species complex, J. Plankton Res., 27, 199, 10.1093/plankt/fbh160 Kibler, 2015, A practical approach for Gambierdiscus species monitoring in the Caribbean Kibler, 2012, Growth of eight Gambierdiscus (Dinophyceae) species: Effects of temperature, salinity and irradiance, Harmful Algae, 19, 1, 10.1016/j.hal.2012.04.007 Lehane, 2000, Ciguatera: recent advances but the risk remains, Int. J. Food Microbiol., 61, 91, 10.1016/S0168-1605(00)00382-2 Litaker, 2009, Taxonomy of Gambierdiscus including four new species, Gambierdiscus caribaeus, Gambierdiscus carolinianus, Gambierdiscus carpenteri and Gambierdiscus ruetzleri (Gonyaulacales, Dinophyceae), Phycologia, 48, 344, 10.2216/07-15.1 Litaker, 2010, Global distribution of ciguatera causing dinoflagellates in the genus Gambierdiscus, Toxicon, 56, 711, 10.1016/j.toxicon.2010.05.017 Lewis, 2001, The changing fact of ciguatera, Toxicon, 39, 97, 10.1016/S0041-0101(00)00161-6 Litaker, 2017, Ciguatoxicity of Gambierdiscus and Fukuyoa species from the Caribbean and Gulf of Mexico, PloS one, 12, 10.1371/journal.pone.0185776 Longo, 2019, Intraspecific variability in the toxin production and toxin profiles of in vitro cultures of Gambierdiscus polynesiensis (Dinophyceae) from French Polynesia, Toxins, 11, 735, 10.3390/toxins11120735 Lozano-Duque, 2018, Development and validation of PCR-RFLP assay for identification of Gambierdiscus species in the Greater Caribbean Region, J. Appl. Phycol., 1 Lyu, 2017, LSU rDNA based RFLP assays for the routine identification of Gambierdiscus species, Harmful algae, 66, 20, 10.1016/j.hal.2017.04.009 Maranda, 1985, Comparison of toxicity between populations of Gonyaulax tamarensis of eastern North American waters, Estuarine, Coast. Shelf Sci., 21, 401, 10.1016/0272-7714(85)90020-4 Mikulski, 2005, Development and application of LSU rRNA probes for Karenia brevis in the Gulf of Mexico, USA, Harmful Algae, 4, 49, 10.1016/j.hal.2003.11.001 Nishimura, 2016, Quantitative PCR assay for detection and enumeration of ciguatera-causing dinoflagellate Gambierdiscus spp. (Gonyaulacales) in coastal areas of Japan, Harmful Algae, 52, 11, 10.1016/j.hal.2015.11.018 Parsons, 1999, Pseudo-nitzschia in Louisiana coastal waters: molecular probe field trials, genetic variability, and domoic acid analyses, J. Phycol., 35, 1368, 10.1046/j.1529-8817.1999.3561368.x Parsons, 2010, A simple model capable of simulating population dynamics of Gambierdiscus, the benthic dinoflagellate responsible for ciguatera fish poisoning, Harmful Algae, 10, 71, 10.1016/j.hal.2010.07.002 Parsons, 2012, Gambierdiscus and Ostreopsis: reassessment of the state of knowledge of their taxonomy, geography, ecophysiology, and toxicology., Harmful Algae, 14, 107, 10.1016/j.hal.2011.10.017 Parsons, 2017, Assessing the use of artificial substrates to monitor Gambierdiscus populations in the Florida Keys, Harmful Algae, 68, 52, 10.1016/j.hal.2017.07.007 Radke, 2013, Ciguatera incidence in the US Virgin Islands has not increased over a 30-year time period despite rising seawater temperatures, Am. J. Trop. Med. Hygiene, 88, 908, 10.4269/ajtmh.12-0676 Radke, 2015, Epidemiology of ciguatera in Florida, Am. J. Trop. Med. Hygiene, 93, 425, 10.4269/ajtmh.14-0400 Rains, 2015, Gambierdiscus species exhibit different epiphytic behaviors toward a variety of macroalgal hosts, Harmful Algae, 49, 29, 10.1016/j.hal.2015.08.005 Richlen, 2011, Effects of depth, habitat, and water motion on the abundance and distribution of ciguatera dinoflagellates at Johnston Atoll, Pacific Ocean, Mar. Ecol. Progr. Ser., 421, 51, 10.3354/meps08854 Robertson, 2018, Toxicity, chemistry, and implications of Gamberdiscus silvae: A ciguatoxin superbug in the Greater Caribbean Region Scheuer, 1967, Ciguatoxin: isolation and chemical nature, Science (New York, N.Y.), 155, 1267, 10.1126/science.155.3767.1267 Scholin, 1993, Population analysis of toxic and nontoxic Alexandrium species using ribosomal RNA signature sequences Scholin, 1996, Identification of Pseudo-nitzschia australis (Bacillariophyceae) using rRNA-targeted probes in whole cell and sandwich hybridization formats, Phycologia, 35, 190, 10.2216/i0031-8884-35-3-190.1 Skinner, 2011, Ciguatera fish poisoning in the Pacific Islands (1998 to 2008), PLoS Negl Trop Dis, 5, e1416., 10.1371/journal.pntd.0001416 Tester, 2014, Sampling harmful benthic dinoflagellates: Comparison of artificial and natural substrate methods., Harmful Algae, 39, 8, 10.1016/j.hal.2014.06.009 Vandersea, 2012, Development of semi-quantitative PCR assays for the detection and enumeration of Gambierdiscus species (Gonyaulacales, Dinophyceae), J. Phycol., 48, 10.1111/j.1529-8817.2012.01146.x Xu, 2016, Influence of environmental variables on Gambierdiscus spp. (Dinophyceae) growth and distribution, PLoS One, 11, e0153197, 10.1371/journal.pone.0153197 Xu, 2014, Distribution, abundance and diversity of Gambierdiscus spp. from a ciguatera-endemic area in Marakei, Republic of Kiribati, Harmful Algae, 34, 56, 10.1016/j.hal.2014.02.007 Zheng, 1996, Characterization of universal small-subunit rRNA hybridization probes for quantitative molecular microbial ecology studies, Appl. Environ. Microbiol., 62, 4504, 10.1128/aem.62.12.4504-4513.1996