Development of a droplet digital PCR assay for sensitive detection of porcine circovirus 3
Tài liệu tham khảo
Mankertz, 2004, Molecular biology of porcine circovirus: analyses of gene expression and viral replication, Vet. Microbiol., 98, 81, 10.1016/j.vetmic.2003.10.014
Tischer, 1982, A very small porcine virus with circular single-stranded DNA, Nature, 295, 64, 10.1038/295064a0
Li, 2018, Origin, genetic diversity, and evolutionary dynamics of novel porcine circovirus 3, Adv. Sci., 5, 1800275, 10.1002/advs.201800275
Cheung, 2003, Comparative analysis of the transcriptional patterns of pathogenic and nonpathogenic porcine circoviruses, Virology, 310, 41, 10.1016/S0042-6822(03)00096-5
Palinski, 2017, A novel porcine circovirus distantly related to known circoviruses is associated with porcine dermatitis and nephropathy syndrome and reproductive failure, J. Virol., 91, 10.1128/JVI.01879-16
Tischer, 1974, Characterization of papovavirus-and picornavirus-like particles in permanent pig kidney cell lines, Zentralbl Bakteriol Orig A, 226, 153
Saha, 2011, Outcome of experimental porcine circovirus type 1 infections in mid-gestational porcine foetuses, BMC Vet. Res., 7, 64, 10.1186/1746-6148-7-64
Opriessnig, 2007, Porcine circovirus type 2 associated disease: update on current terminology, clinical manifestations, pathogenesis, diagnosis, and intervention strategies, J. Vet. Diagn. Invest., 19, 591, 10.1177/104063870701900601
Segales, 2012, Porcine circovirus type 2 (PCV2) infections: clinical signs, pathology and laboratory diagnosis, Virus Res., 164, 10, 10.1016/j.virusres.2011.10.007
Gillespie, 2009, Porcine circovirus type 2 and porcine circovirus-associated disease, J. Vet. Intern. Med., 23, 1151, 10.1111/j.1939-1676.2009.0389.x
Ge, 2012, Porcine circovirus type 2 and its associated diseases in China, Virus Res., 164, 100, 10.1016/j.virusres.2011.10.005
Alarcon, 2013, Cost of post-weaning multi-systemic wasting syndrome and porcine circovirus type-2 subclinical infection in England - an economic disease model, Prev. Vet. Med., 110, 88, 10.1016/j.prevetmed.2013.02.010
Kim, 2018, Detection and genetic characterization of porcine circovirus 3 from aborted fetuses and pigs with respiratory disease in Korea, J. Vet. Sci., 19, 721, 10.4142/jvs.2018.19.5.721
Zou, 2018, Molecular detection and sequence analysis of porcine circovirus type 3 in sow sera from farms with prolonged histories of reproductive problems in Hunan, China, Arch. Virol., 163, 2841, 10.1007/s00705-018-3914-7
Chen, 2017, Detection and genome sequencing of porcine circovirus 3 in neonatal pigs with congenital tremors in South China, Transbound Emerg Dis, 64, 1650, 10.1111/tbed.12702
Phan, 2016, Detection of a novel circovirus PCV3 in pigs with cardiac and multi-systemic inflammation, Virol. J., 13, 184, 10.1186/s12985-016-0642-z
Kedkovid, 2018, Porcine circovirus type 3 (PCV3) infection in grower pigs from a Thai farm suffering from porcine respiratory disease complex (PRDC), Vet. Microbiol., 215, 71, 10.1016/j.vetmic.2018.01.004
Hindson, 2013, Absolute quantification by droplet digital PCR versus analog real-time PCR, Nat. Methods, 10, 1003, 10.1038/nmeth.2633
Nixon, 2014, Comparative study of sensitivity, linearity, and resistance to inhibition of digital and nondigital polymerase chain reaction and loop mediated isothermal amplification assays for quantification of human cytomegalovirus, Anal. Chem., 86, 4387, 10.1021/ac500208w
Hall Sedlak, 2014, The potential advantages of digital PCR for clinical virology diagnostics, Expert Rev. Mol. Diagn, 14, 501, 10.1586/14737159.2014.910456
Dingle, 2013, Tolerance of droplet-digital PCR vs real-time quantitative PCR to inhibitory substances, Clin. Chem., 59, 1670, 10.1373/clinchem.2013.211045
Hindson, 2011, High-throughput droplet digital PCR system for absolute quantitation of DNA copy number, Anal. Chem., 83, 8604, 10.1021/ac202028g
Pinheiro, 2012, Evaluation of a droplet digital polymerase chain reaction format for DNA copy number quantification, Anal. Chem., 84, 1003, 10.1021/ac202578x
Kuypers, 2017, Applications of digital PCR for clinical microbiology, J. Clin. Microbiol., 55, 1621, 10.1128/JCM.00211-17
Bell, 2018, Analyzing copy number variation with droplet digital PCR, Methods Mol. Biol., 1768, 143, 10.1007/978-1-4939-7778-9_9
Ferracin, 2018, Quantification of circulating microRNAs by droplet digital PCR, Methods Mol. Biol., 1768, 445, 10.1007/978-1-4939-7778-9_25
Demeke, 2018, Critical assessment of digital PCR for the detection and quantification of genetically modified organisms, Anal. Bioanal. Chem., 410, 4039, 10.1007/s00216-018-1010-1
Wang, 2017, Development of a TaqMan-based real-time PCR assay for the specific detection of porcine circovirus 3, J. Virol. Methods, 248, 177, 10.1016/j.jviromet.2017.07.007
Li, 2016, Prevalence and genetic variation of porcine circovirus type 2 in Hebei, China from 2004 to 2014, Gene, 586, 222, 10.1016/j.gene.2016.04.014
Yuan, 2014, Complete genome sequence of porcine circovirus type 2 strain HB-MC1, Genome Announc., 2, 10.1128/genomeA.00987-14
Yuan, 2014, Isolation and molecular analysis of porcine encephalomyocarditis virus strain BD2 from northern China, Infect. Genet. Evol., 21, 303, 10.1016/j.meegid.2013.11.014
Zhang, 2018, Development of recombinase polymerase amplification assays for the rapid detection of peste des petits ruminants virus, J. Virol. Methods, 254, 35, 10.1016/j.jviromet.2018.01.012
Saraiva, 2018, Evolutionary analysis of porcine circovirus 3 (PCV3) indicates an ancient origin for its current strains and a worldwide dispersion, Virus Gene., 54, 376, 10.1007/s11262-018-1545-4
Ku, 2017, Identification and genetic characterization of porcine circovirus type 3 in China, Transbound Emerg Dis, 64, 703, 10.1111/tbed.12638
Tochetto, 2018, Full-genome sequence of porcine circovirus type 3 recovered from serum of sows with stillbirths in Brazil, Transbound Emerg Dis, 65, 5, 10.1111/tbed.12735
Kwon, 2017, Prevalence of novel porcine circovirus 3 in Korean pig populations, Vet. Microbiol., 207, 178, 10.1016/j.vetmic.2017.06.013
Hayashi, 2018, First detection of porcine circovirus type 3 in Japan, J. Vet. Med. Sci., 80, 1468, 10.1292/jvms.18-0079
Stadejek, 2017, First detection of porcine circovirus type 3 on commercial pig farms in Poland, Transbound Emerg Dis, 64, 1350, 10.1111/tbed.12672
Franzo, 2018, Full-genome sequencing of porcine circovirus 3 field strains from Denmark, Italy and Spain demonstrates a high within-Europe genetic heterogeneity, Transbound Emerg Dis, 65, 602, 10.1111/tbed.12836
Fux, 2018, Full genome characterization of porcine circovirus type 3 isolates reveals the existence of two distinct groups of virus strains, Virol. J., 15, 25, 10.1186/s12985-018-0929-3
Ye, 2018, Detection and genetic characterisation of porcine circovirus 3 from pigs in Sweden, Virus Gene., 54, 466, 10.1007/s11262-018-1553-4
Collins, 2017, Porcine circovirus type 3 in the UK, Vet. Rec., 181, 599, 10.1136/vr.j5505
Yuzhakov, 2018, First detection and full genome sequence of porcine circovirus type 3 in Russia, Virus Gene., 54, 608, 10.1007/s11262-018-1582-z
Wen, 2018, The detection of porcine circovirus 3 in Guangxi, China, Transbound Emerg Dis, 65, 27, 10.1111/tbed.12754
Wang, 2017, Recombinase polymerase amplification assay for rapid detection of porcine circovirus 3, Mol. Cell. Probes, 36, 58, 10.1016/j.mcp.2017.09.001
Park, 2018, Loop-mediated isothermal amplification assay for the rapid and visual detection of novel porcine circovirus 3, J. Virol. Methods, 253, 26, 10.1016/j.jviromet.2017.12.006
Vogelstein, 1999, Digital PCR, Proc. Natl. Acad. Sci. U.S.A., 96, 9236, 10.1073/pnas.96.16.9236
Zimmermann, 2008, Digital PCR: a powerful new tool for noninvasive prenatal diagnosis?, Prenat. Diagn., 28, 1087, 10.1002/pd.2150
Bhat, 2009, Single molecule detection in nanofluidic digital array enables accurate measurement of DNA copy number, Anal. Bioanal. Chem., 394, 457, 10.1007/s00216-009-2729-5
Pohl, 2004, Principle and applications of digital PCR, Expert Rev. Mol. Diagn, 4, 41, 10.1586/14737159.4.1.41
Diehl, 2007, Digital quantification of mutant DNA in cancer patients, Curr. Opin. Oncol., 19, 36, 10.1097/CCO.0b013e328011a8e7
Zhao, 2018, Retrospective survey and phylogenetic analysis of porcine circovirus type 3 in Jiangsu province, China, 2008 to 2017, Arch. Virol., 163, 2531, 10.1007/s00705-018-3870-2
Xu, 2018, Detection and phylogenetic analysis of porcine circovirus type 3 in central China, Transbound Emerg Dis, 65, 1163, 10.1111/tbed.12920
