DevR-mediated adaptive response in Mycobacterium tuberculosis H37Ra: Links to asparagine metabolism

Tuberculosis - Tập 89 - Trang 169-174 - 2009
Vandana Malhotra1, Jaya Sivaswami Tyagi2, Josephine E. Clark-Curtiss1,3
1Center for Infectious Diseases and Vaccinology, The Biodesign Institute, Arizona State University, 1001 South McAllister Avenue, Tempe, AZ 85287, USA
2Department of Biotechnology, All India Institute of Medical Sciences, New Delhi, 110029, India
3School of Life Sciences, Arizona State University, 1001 South McAllister Avenue, Tempe, AZ 85287, USA

Tài liệu tham khảo

Steenken, 1934, Biological studies of the tubercle bacillus: III. Dissociation and pathogenicity of the R and S variants of the human tubercle bacillus (H37), J Exp Med, 60, 515, 10.1084/jem.60.4.515 Gao, 2004, Comparative expression studies of a complex phenotype: cord formation in Mycobacterium tuberculosis, Tuberculosis, 84, 188, 10.1016/j.tube.2003.12.013 Cardona, 2006, Neutral-red reaction is related to virulence and cell wall methyl-branched lipids in Mycobacterium tuberculosis, Microbes Infect, 8, 183, 10.1016/j.micinf.2005.06.011 He, 2003, Comparative proteome analysis of culture supernatant proteins of Mycobacterium tuberculosis H37Rv and H37Ra, Microbes Infect, 5, 851, 10.1016/S1286-4579(03)00179-5 Lee, 2008, Mutation in the transcriptional regulator PhoP contributes to avirulence of Mycobacterium tuberculosis H37Ra strain, Cell Host Microbe, 3, 97, 10.1016/j.chom.2008.01.002 Rindi, 1999, Search for genes potentially involved in Mycobacterium tuberculosis virulence by mRNA differential display, Biochem Biophys Res Commun, 258, 94, 10.1006/bbrc.1999.0591 Kinger, 1993, Identification and cloning of genes differentially expressed in the virulent strain of Mycobacterium tuberculosis, Gene, 131, 113, 10.1016/0378-1119(93)90678-V Dasgupta, 2000, Characterization of a two-component system, devR-devS, of Mycobacterium tuberculosis, Tuber Lung Dis, 80, 141, 10.1054/tuld.2000.0240 Muttucumaru, 2004, Gene expression profile of Mycobacterium tuberculosis in a non-replicating state, Tuberculosis, 84, 239, 10.1016/j.tube.2003.12.006 Ohno, 2003, The effects of reactive nitrogen intermediates on gene expression in Mycobacterium tuberculosis, Cell Microbiol, 5, 637, 10.1046/j.1462-5822.2003.00307.x Park, 2003, Rv3133c/dosR is a transcription factor that mediates the hypoxic response of Mycobacterium tuberculosis, Mol Microbiol, 48, 833, 10.1046/j.1365-2958.2003.03474.x Sherman, 2001, Regulation of the Mycobacterium tuberculosis hypoxic response gene encoding alpha-crystallin, Proc Natl Acad Sci U S A, 98, 7534, 10.1073/pnas.121172498 Timm, 2003, Differential expression of iron-, carbon-, and oxygen-responsive mycobacterial genes in the lungs of chronically infected mice and tuberculosis patients, Proc Natl Acad Sci U S A, 100, 14321, 10.1073/pnas.2436197100 Voskuil, 2003, Inhibition of respiration by nitric oxide induces a Mycobacterium tuberculosis dormancy program, J Exp Med, 198, 705, 10.1084/jem.20030205 Kumar, 2008, Heme oxygenase-1-derived carbon monoxide induces the Mycobacterium tuberculosis dormancy regulon, J Biol Chem, 283, 18032, 10.1074/jbc.M802274200 Shiloh, 2008, Mycobacterium tuberculosis senses host-derived carbon monoxide during macrophage infection, Cell Host Microbe, 3, 323, 10.1016/j.chom.2008.03.007 Sharma, 2007, The value of comparative genomics in understanding mycobacterial virulence: Mycobacterium tuberculosis H37Ra genome sequencing – a worthwhile endeavour, J Biosci, 32, 185, 10.1007/s12038-007-0018-z Wayne, 1977, Synchronized replication of Mycobacterium tuberculosis, Infect Immun, 17, 528, 10.1128/IAI.17.3.528-530.1977 Wayne, 1996, An in vitro model for sequential study of shiftdown of Mycobacterium tuberculosis through two stages of nonreplicating persistence, Infect Immun, 64, 2062, 10.1128/IAI.64.6.2062-2069.1996 Voskuil, 2004, Mycobacterium tuberculosis gene expression during adaptation to stationary phase and low-oxygen dormancy, Tuberculosis, 84, 218, 10.1016/j.tube.2004.02.003 Betts, 2002, Evaluation of a nutrient starvation model of Mycobacterium tuberculosis persistence by gene and protein expression profiling, Mol Microbiol, 43, 717, 10.1046/j.1365-2958.2002.02779.x Saini, 2004, DevR–DevS is a bona fide two-component system of Mycobacterium tuberculosis that is hypoxia-responsive in the absence of the DNA-binding domain of DevR, Microbiology, 150, 865, 10.1099/mic.0.26218-0 Jayaram, 1968, L-asparaginases from Mycobacterium tuberculosis strains H37Rv and H37Ra, Arch Biochem Biophys, 126, 165, 10.1016/0003-9861(68)90570-5 Jayaram, 1969, Aspartotransferase from Mycobacterium tuberculosis H37Ra, Indian J Biochem, 6, 106 Segal W, Edwards BS. Carbohydrate and amino acid metabolism and control. In: Kubica GP, Wayne LG, editors. The mycobacteria: a source book – Part A. New York and Basel: Marcel Dekker Inc. 1984. p. 575–94. Masood, 1985, Metabolism of mycobacteria, J Biosci, 7, 421 Bagchi, 2005, Transcription and autoregulation of the Rv3134c-devR-devS operon of Mycobacterium tuberculosis, Microbiology, 151, 4045, 10.1099/mic.0.28333-0 Rodriguez, 2008, Rv3134c/devR/devS operon of Mycobacterium bovis BCG is differentially transcribed under “in vitro” stress conditions, Tuberculosis, 88, 273, 10.1016/j.tube.2007.11.011 Geckil, 2006, Effect of Vitreoscilla hemoglobin on production of a chemotherapeutic enzyme, L-asparaginase, by Pseudomonas aeruginosa, Biotechnol J, 1, 203, 10.1002/biot.200500048 Shi, 2005, Changes in energy metabolism of Mycobacterium tuberculosis in mouse lung and under in vitro conditions affecting aerobic respiration, Proc Natl Acad Sci U S A, 102, 15629, 10.1073/pnas.0507850102 Chauhan, 2008, Cooperative binding of phosphorylated DevR to upstream sites is necessary and sufficient for activation of the Rv3134c-devRS operon in Mycobacterium tuberculosis: implication in the induction of DevR target genes, J Bacteriol, 190, 4301, 10.1128/JB.01308-07 Sritharan, 1989, Metabolism of aspartate in Mycobacterium smegmatis, Eur J Biochem, 180, 587, 10.1111/j.1432-1033.1989.tb14685.x Zheng, 2008, Genetic basis of virulence attenuation revealed by comparative genomic analysis of Mycobacterium tuberculosis strain H37Ra versus H37Rv, PLoS ONE, 3, 10.1371/journal.pone.0002375 Sun, 2004, Mycobacterium tuberculosis ECF sigma factor sigC is required for lethality in mice and for the conditional expression of a defined gene set, Mol Microbiol, 52, 25, 10.1111/j.1365-2958.2003.03958.x