Data for chromosome contacts and matched transcription profiles at three cell cycle phases in the fission yeast
Tài liệu tham khảo
Grand, 2014, Chromosome conformation maps in fission yeast reveal cell cycle dependent sub nuclear structure, Nucleic Acids Res., 1
Rodley, 2009, Global identification of yeast chromosome interactions using Genome conformation capture, Fungal Genet. Biol., 46, 879, 10.1016/j.fgb.2009.07.006
Trapnell, 2012, Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks, Nat. Protoc., 7, 562, 10.1038/nprot.2012.016
Faraday, 1994, Synchronization studies on Schizosaccharomyces pombe, 154
Walker, 1999, Synchronization of yeast cell populations, Methods Cell Sci., 21, 87, 10.1023/A:1009824520278
Hirano, 1988, A temperature-sensitive mutation of the Schizosaccharomyces pombe gene nuc2+ that encodes a nuclear scaffold-like protein blocks spindle elongation in mitotic anaphase, J. Cell Biol., 106, 1171, 10.1083/jcb.106.4.1171
Fantes, 1978, Control of the timing of cell division in the fission yeast, 115, 317
Gómez, 2004, Analysis of the fission yeast Schizosaccharomyces pombe cell cycle, Methods Mol. Biol., 241, 93
Nurse, 1975, Genetic control of cell size at cell division in yeast, Nature, 256, 547, 10.1038/256547a0
Aves, 1985, Cloning, sequencing and transcriptional control of the Schizosaccharomyces pombe cdc10 “start” gene, EMBO J., 4, 457, 10.1002/j.1460-2075.1985.tb03651.x
Sabatinosa, 2010, 759, 10.1016/S0076-6879(10)70032-X
Nurse, 1976, Genetic control of the cell division cycle in the fission yeast Schizosaccharomyces pombe, Mol. Gen. Genet., 146, 167, 10.1007/BF00268085
Cagliero, 2013, Genome conformation capture reveals that the Escherichia coli chromosome is organized by replication and transcription, Nucleic Acids Res., 41, 6058, 10.1093/nar/gkt325
Li, 2008, SOAP: short oligonucleotide alignment program, Bioinforma. Appl. Note, 24, 713, 10.1093/bioinformatics/btn025
R Development Core Team, 2008
Trapnell, 2012, Differential analysis of gene regulation at transcript resolution with RNA-seq, Nat. Biotechnol., 31, 46, 10.1038/nbt.2450