DNA barcoding, species-specific PCR for the identification of three stored-product pest species of genus Palorus (Coleoptera: Tenebrionidae)

Journal of Stored Products Research - Tập 78 - Trang 32-38 - 2018
Yujie Lu1, Yaru Zhao1, Zhengyan Wang1, Shiyuan Miao1, Fengjie Liu1, Robert N. Emery2
1School of Food Science and Technology, Collaborative Innovation Centre of Henan Grain Crops, Henan Collaborative Innovation Centre of Grain Storage and Security, Henan University of Technology, Zhengzhou, 450001, China
2Department of Agriculture and Food, South Perth, Australia

Tài liệu tham khảo

Athanassiou, 2014, Competition among species of stored-product psocids (Psocoptera) in stored grain, PLoS One, 9, 10.1371/journal.pone.0102867 Bennett, 2015, Molecular differentiation of the African yellow fever vector Aedes bromeliae (Diptera: Culicidae) from its sympatric nonvector sister species, Aedes lilii. PLoS Neglect. Trop. D, 9 Bolton, 1975, 9 Cooper, 1952, Nutritive requirements of the small-eyed flour beetle, Palorus ratzeburgi Wissman (Tenebrionidae, Coleoptera), Physiol. Zool., 25, 20, 10.1086/physzool.25.1.30160909 Davies, 1960, Coleoptera associated with stored products in Uganda, E. Afr. Agr. J., 25, 199 Deng, 2012, DNA barcoding of six Ceroplastes species (Hemiptera: coccoidea: Coccidae) from China, Mol. Ecol. Resour, 12, 791, 10.1111/j.1755-0998.2012.03152.x Diaz-Montano, 2015, Evaluation of potential attractants for six species of stored-product psocids (Psocoptera: liposcelididae, Trogiidae), J. Econ. Entomol., 108, 1398, 10.1093/jee/tov028 Doumbia, 2014, Effectiveness of diatomaceous earth for control of Sitophilus zeamais (Coleoptera: Curculionidae), Tribolium castaneum and Palorus subdepressus (Coleoptera: Tenebrionidae), J. Stored Prod. Res., 57, 1, 10.1016/j.jspr.2013.11.008 Folmer, 1994, DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates, Mol. Mar. Biol. Biotechnol., 3, 294 Gorham, 1991, 187 Hall, 1999, BioEdit: a user-friendly biological sequence alignment edi-tor and analysis program for Windows 95 ⁄ 98⁄ NT. Nucleic, Acids Symp. Ser, 41, 95 Halstead, 1967, Biological studies on species of Palorus, and Coelopalorus, with comparative notes on Tribolium and Latheticus (Coleoptera: Tenebrionidae), J. Stored Prod. Res., 2, 273, 10.1016/0022-474X(67)90076-8 Hebert, 2004, Identification of birds through DNA barcodes, PLoS Biol., 2, 1657, 10.1371/journal.pbio.0020312 Meätrovié, 2000, Comparative study of satellite sequences and phylogeny of five species from the genus Palorus, Genome, 43, 776, 10.1139/g00-035 Mestrović, 1998, Evolution of satellite DNAs from the genus Palorus experimental evidence for the" library" hypothesis, Mol. Biol. Evol., 15, 1062, 10.1093/oxfordjournals.molbev.a026005 Puillandre, 2012, ABGD, Automatic barcode gap discovery for primary species delimitation, Mol. Ecol., 21, 1864, 10.1111/j.1365-294X.2011.05239.x Qin, 2015, Mitochondrial phylogenomics and genetic relationships of closely related pine moth (Lasiocampidae: dendrolimus) species in China, using whole mitochondrial genomes, BMC Genom., 16, 428, 10.1186/s12864-015-1566-5 Rebijith, 2013, DNA barcoding and elucidation of cryptic aphid species (Hemiptera: aphididae) in India, Bull. Entomol. Res., 103, 601, 10.1017/S0007485313000278 Strutzenberger, 2011, DNA barcoding based species delimitation increases species count of Eois (Geometridae) moths in a well-studied tropical mountain forest by up to 50%, Insect Sci., 18, 349, 10.1111/j.1744-7917.2010.01366.x Tamura, 2011, MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods, Mol. Biol. Evol., 28, 2731, 10.1093/molbev/msr121 Toumi, 2013, Development of two species-specific primer sets to detect the cereal cyst nematodes Heterodera avenae and Heterodera filipjevi, Eur. J. Plant Pathol., 136, 613, 10.1007/s10658-013-0192-9 Varadínová, 2015, COI barcode based species-specific primers for identification of five species of stored-product pests from genus Cryptolestes (Coleoptera: laemophloeidae), Bull. Entomol. Res., 105, 202, 10.1017/S0007485315000024 Wang, 2014, DNA barcoding of five common stored-product pest species of genus Cryptolestes (Coleoptera: laemophloeidae), Bull. Entomol. Res., 104, 671 Wang, 2016, Fumigation action of four plant oils against eggs of Callosobruchus chinensis (L.) (Coleoptera: bruchidae), J. Essent. Oil Bear. Pl, 19, 1394, 10.1080/0972060X.2016.1215263 Wong, 2009, Identifying sharks with DNA barcodes: assessing the utility of a nucleotide diagnostic approach, Mol. Ecol. Resour, 9, 243, 10.1111/j.1755-0998.2009.02653.x Yan, 2013, Species-specific PCR assays for differentiating Heterodera filipjevi and H. avenae, Plant Dis., 97, 1611, 10.1094/PDIS-01-13-0064-RE Yang, 2013, Rapid molecular diagnosis of the stored-product psocid Liposcelis corrodens (Psocodea: liposcelididae): species-specific PCR primers of 16S rDNA and COI, J. Stored Prod. Res., 54, 1, 10.1016/j.jspr.2013.03.005 Yang, 2013, Validation of the 16S rDNA and COI DNA barcoding technique for rapid molecular identification of stored product psocids (Insecta: psocodea: Liposcelididae), J. Econ. Entomol., 106, 419, 10.1603/EC12163 Zhang, 1998, 370 Zhang, 2016, DNA barcoding, species-specific PCR and real-time PCR techniques for the identification of six Tribolium pests of stored products, Sci. Rep., 6