Creation of gene-specific rice mutants by AvrXa23-based TALENs
Tài liệu tham khảo
Baker, 2012, Gene-editing nucleases, Nature Methods, 9, 23, 10.1038/nmeth.1807
Baltes, 2015, Enabling plant synthetic biology through genome engineering, Trends in Biotechnology, 33, 120, 10.1016/j.tibtech.2014.11.008
Beurdeley, 2013, Compact designer TALENs for efficient genome engineering, Nature communications, 4, 1762, 10.1038/ncomms2782
Bloom, 2013, Inactivation of hepatitis B virus replication in cultured cells and in vivo with engineered transcription activator-like effector nucleases, Molecular Therapy: the Journal of the American Society of Gene Therapy, 21, 1889, 10.1038/mt.2013.170
Boch, 2010, Xanthomonas AvrBs3 family-type III effectors: Discovery and function, Annual Review of Phytopathology, 48, 419, 10.1146/annurev-phyto-080508-081936
Boch, 2009, Breaking the code of DNA binding specificity of TAL-type III effectors, Science, 326, 1509, 10.1126/science.1178811
Carlson, 2012, Efficient TALEN-mediated gene knockout in livestock, Proceedings of the National Academy of Sciences of the United States of America, 109, 17382, 10.1073/pnas.1211446109
Carroll, 2014, Genome engineering with targetable nucleases, Annual Review of Biochemistry, 83, 409, 10.1146/annurev-biochem-060713-035418
Cermak, 2011, Efficient design and assembly of custom TALEN and other TAL effector-based constructs for DNA targeting, Nucleic Acids Research, 39, e82, 10.1093/nar/gkr218
Char, 2015, Heritable site-specific mutagenesis using TALENs in maize, Plant Biotechnology Journal, 13, 1002, 10.1111/pbi.12344
Chen, 2014, An efficient TALEN mutagenesis system in rice, Methods, 69, 2, 10.1016/j.ymeth.2014.02.013
Christian, 2010, Targeting DNA double-strand breaks with TAL effector nucleases, Genetics, 186, 757, 10.1534/genetics.110.120717
Christian, 2013, Targeted mutagenesis of Arabidopsis thaliana using engineered TAL effector nucleases, G3-Genes Genomes Genetics, 3, 1697, 10.1534/g3.113.007104
Clasen, 2016, Improving cold storage and processing traits in potato through targeted gene knockout, Plant Biotechnology Journal, 14, 169, 10.1111/pbi.12370
Dellaporta, 1983, A plant DNA minipreparation: version II, Plant Molecular Biology Reporter, 1, 19, 10.1007/BF02712670
Deng, 2012, Recognition of methylated DNA by TAL effectors, Cell Research, 22, 1502, 10.1038/cr.2012.127
Ding, 2013, A TALEN genome-editing system for generating human stem cell-based disease models, Cell Stem Cell, 12, 238, 10.1016/j.stem.2012.11.011
Endo, 2015, Multigene knockout utilizing off-target mutations of the CRISPR/Cas9 system in rice, Plant Cell Physiology, 56, 41, 10.1093/pcp/pcu154
Forner, 2015, Germline-transmitted genome editing in Arabidopsis thaliana Using TAL-effector-nucleases, PLOS ONE, 10, e0121056, 10.1371/journal.pone.0121056
Fu, 2013, High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells, Nature Biotechnology, 31, 822, 10.1038/nbt.2623
Gurushidze, 2014, True-breeding targeted gene knock-out in barley using designer TALE-nuclease in haploid cells, PLOS ONE, 9, e92046, 10.1371/journal.pone.0092046
Haun, 2014, Improved soybean oil quality by targeted mutagenesis of the fatty acid desaturase 2 gene family, Plant Biotechnology Journal, 12, 934, 10.1111/pbi.12201
Hiei, 1994, Efficient transformation of rice (Oryza sativa L.) mediated by Agrobacterium and sequence analysis of the boundaries of the T-DNA, The Plant Journal, 6, 271, 10.1046/j.1365-313X.1994.6020271.x
Hruscha, 2013, Efficient CRISPR/Cas9 genome editing with low off-target effects in zebrafish, Development, 140, 4982, 10.1242/dev.099085
Huang, 2011, Heritable gene targeting in zebrafish using customized TALENs, Nature Biotechnology, 29, 699, 10.1038/nbt.1939
Ishii, 2015, Germline genome-editing research and its socioethical implications, Trends in Molecular Medicine, 21, 473, 10.1016/j.molmed.2015.05.006
Jacobs, 2015, Targeted genome modifications in soybean with CRISPR/Cas9, BMC Biotechnology, 15, 16, 10.1186/s12896-015-0131-2
Lei, 2012, Efficient targeted gene disruption in Xenopus embryos using engineered transcription activator-like effector nucleases (TALENs), Proceedings of the National Academy of Sciences of the United States of America, 109, 17484, 10.1073/pnas.1215421109
Li, 2010, TAL nucleases (TALNs): Hybrid proteins composed of TAL effectors and FokI DNA-cleavage domain, Nucleic Acids Research, 39, 359, 10.1093/nar/gkq704
Li, 2011, Modularly assembled designer TAL effector nucleases for targeted gene knockout and gene replacement in eukaryotes, Nucleic Acids Research, 39, 6315, 10.1093/nar/gkr188
Li, 2012, High-efficiency TALEN-based gene editing produces diseaseresistant rice, Nature Biotechnology, 30, 390, 10.1038/nbt.2199
Liang, 2014, Targeted mutagenesis in Zea mays using TALENs and the CRISPR/Cas system, Journal of Genetics and Genomics, 41, 63, 10.1016/j.jgg.2013.12.001
Lin, 2014, CRISPR/Cas9 systems have off-target activity with insertions or deletions between target DNA and guide RNA sequences, Nucleic Acids Research, 42, 7473, 10.1093/nar/gku402
Liu, 2012, The rice ERF transcription factor OsERF922 negatively regulates resistance to Magnaporthe oryzae and salt tolerance, Journal of Experimental Botany, 63, 3899, 10.1093/jxb/ers079
Liu, 2012, Efficient and specific modifications of the Drosophila genome by means of an easy TALEN strategy, Journal of Genetics and Genomics, 39, 209, 10.1016/j.jgg.2012.04.003
Liu, 2014, Synthetic TAL effectors for targeted enhancement of transgene expression in plants, Plant Biotechnology Journal, 12, 436, 10.1111/pbi.12150
Liu, 2014, Generation of a monkey with MECP2 mutations by TALEN-based gene targeting, Neuroscience Bulletin, 30, 381, 10.1007/s12264-014-1434-8
Lor, 2014, Targeted mutagenesis of the tomato PROCERA gene using transcription activator-like effector nucleases, Plant Physiology, 166, 1288, 10.1104/pp.114.247593
Lowder, 2015, A CRISPR/Cas9 toolbox for multiplexed plant genome editing and transcriptional regulation, Plant Physiology, 169, 971, 10.1104/pp.15.00636
Ma, 2015, TALEN-based mutagenesis of lipoxygenase LOX3 enhances the storage tolerance of rice (Oryza sativa) seeds, PLOS ONE, 10, e0143877, 10.1371/journal.pone.0143877
Ma, 2015, A robust CRISPR/Cas9 system for convenient, high-efficiency multiplex genome editing in monocot and dicot plants, Molecular Plant, 8, 1274, 10.1016/j.molp.2015.04.007
McGinnis, 2010, RNAi for functional genomics in plants, Briefings in Functional Genomics, 9, 111, 10.1093/bfgp/elp052
Miller, 2011, A TALE nuclease architecture for efficient genome editing, Nature Biotechnology, 29, 143, 10.1038/nbt.1755
Moscou, 2009, A simple cipher governs DNA recognition by TAL effectors, Science, 326, 1501, 10.1126/science.1178817
Moynahan, 2010, Mitotic homologous recombination maintains genomic stability and suppresses tumorigenesis, Nature Reviews Molecular Cell Biology, 11, 196, 10.1038/nrm2851
Mussolino, 2011, A novel TALE nuclease scaffold enables high genome editing activity in combination with low toxicity, Nucleic Acids Research, 39, 9283, 10.1093/nar/gkr597
Nicolia, 2015, Targeted gene mutation in tetraploid potato through transient TALEN expression in protoplasts, Journal of Biotechnology, 204, 17, 10.1016/j.jbiotec.2015.03.021
Reyon, 2012, FLASH assembly of TALENs for high-throughput genome editing, Nature Biotechnology, 30, 460, 10.1038/nbt.2170
Sander, 2011, Targeted gene disruption in somatic zebrafish cells using engineered TALENs, Nature Biotechnology, 29, 697, 10.1038/nbt.1934
Shan, 2013, Rapid and efficient gene modification in rice and Brachypodium using TALENs, Molecular Plant, 6, 1365, 10.1093/mp/sss162
Shan, 2015, Creation of fragrant rice by targeted knockout of the OsBADH2 gene using TALEN technology, Plant Biotechnology Journal, 13, 791, 10.1111/pbi.12312
Song, 2013, Generation of RAG 1- and 2-deficient rabbits by embryo microinjection of TALENs, Cell Research, 23, 1059, 10.1038/cr.2013.85
Sun, 2013, Site-specific gene targeting using transcription activator-like effector (TALE)-based nuclease in Brassica oleracea, Journal of Integrative Plant Biology, 55, 1092, 10.1111/jipb.12091
Symington, 2011, Double-strand break end resection and repair pathway choice, Annual Review of Genetics, 45, 247, 10.1146/annurev-genet-110410-132435
Tan, 2013, Efficient nonmeiotic allele introgression in livestock using custom endonucleases, Proceedings of the National Academy of Sciences of the United States of America, 110, 16526, 10.1073/pnas.1310478110
Tesson, 2011, Knockout rats generated by embryo microinjection of TALENs, Nature Biotechnology, 29, 695, 10.1038/nbt.1940
Tong, 2012, Rapid and cost-effective gene targeting in rat embryonic stem cells by TALENs, Journal of Genetics and Genomics, 39, 275, 10.1016/j.jgg.2012.04.004
Valton, 2012, Overcoming transcription activator-like effector (TALE) DNA binding domain sensitivity to cytosine methylation, The Journal of Biological Chemistry, 287, 38427, 10.1074/jbc.C112.408864
Voytas, 2013, Plant genome engineering with sequence-specific nucleases, Annual Review of Plant Biology, 64, 327, 10.1146/annurev-arplant-042811-105552
Wang, 2014, The broad bacterial blight resistance of rice line CBB23 is triggered by a novel transcription activator-like (TAL) effector of Xanthomonas oryzae pvoryzae, Molecular Plant Pathology, 15, 333, 10.1111/mpp.12092
Wang, 2015, Gene editing by co-transformation of TALEN and chimeric RNA/DNA oligonucleotides on the rice OsEPSPS gene and the inheritance of mutations, PLOS ONE, 10, e0122755, 10.1371/journal.pone.0122755
Wang, 2015, Unbiased detection of off-target cleavage by CRISPR-Cas9 and TALENs using integrase-defective lentiviral vectors, Nature Biotechnology, 33, 175, 10.1038/nbt.3127
Wang, 2014, Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew, Nature Biotechnology, 32, 947, 10.1038/nbt.2969
Weeks, 2016, Use of designer nucleases for targeted gene and genome editing in plants, Plant Biotechnology Journal, 14, 483, 10.1111/pbi.12448
Wendt, 2013, TAL effector nucleases induce mutations at a pre-selected location in the genome of primary barley transformants, Plant Molecular Biology, 83, 279, 10.1007/s11103-013-0078-4
Wolt, 2016, The regulatory status of genome-edited crops, Plant Biotechnology Journal, 14, 510, 10.1111/pbi.12444
Wood, 2011, Targeted genome editing across species using ZFNs and TALENs, Science, 333, 307, 10.1126/science.1207773
Wright, 2014, TALEN-mediated genome editing: Prospects and perspectives, Biochemical Journal, 462, 15, 10.1042/BJ20140295
Zhang, 2016, TALEN-mediated targeted mutagenesis produces a large variety of heritable mutations in rice, Plant Biotechnology Journal, 14, 186, 10.1111/pbi.12372
Zhang, 2014, The CRISPR/Cas9 system produces specific and homozygous targeted gene editing in rice in one generation, Plant Biotechnology Journal, 12, 797, 10.1111/pbi.12200
Zhang, 2011, A highly efficient rice green tissue protoplast system for transient gene expression and studying light/chloroplast-related processes, Plant Methods, 7, 30, 10.1186/1746-4811-7-30
Zhao K J, Wang C L, Zheng C K, Zhang X P, Wang F J, Qin T F. 2014. A Simplified Method and Plasmids for Construction of TAL Effector and TALENs. China Patent, ZL201410032382.6. [2015-10-07]. (in Chinese)
Zhao, 2012, TALENs: Molecular scissors for site-specific genome editing in plants, Scientia Agricultura Sinica, 45, 2787
Zheng, 2014, The last half-repeat of transcription activator-like effector (TALE) is dispensable and thereby TALE-based technology can be simplified, Molecular Plant Pathology, 15, 690, 10.1111/mpp.12125